RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Klk1b4P00757 256 aa13.94□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 AdoQ6PDY2 256 aa13.94□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Znhit3Q9CQK1 151 aa13.94□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Lamtor2Q9JHS3 125 aa13.94□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Mfap4Q9D1H9 257 aa13.93□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Gm17660B9UIU9 90 aa13.93□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 MdkP12025 140 aa13.93□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Olfr1373Q7TQT6 311 aa13.93□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Slc25a28Q8R0Z5 364 aa13.93□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Trav18A0A075B656 109 aa13.93□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Olfr810Q8VFH9 312 aa13.93□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 AmtnQ9D3J8 213 aa13.93□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Opn3Q9WUK7 400 aa13.93□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 GchfrP99025 84 aa13.93□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 C2cd4dP0CG09 341 aa13.93□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Gm904Q3V2L5 102 aa13.93□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Cldn23Q9D7D7 296 aa13.93□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Zfpl1Q9DB43 310 aa13.93□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 NbasE9Q411 2356 aa13.92□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 HrkP62816 92 aa13.92□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Hspe1Q64433 102 aaKnown RBP13.92□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Znrf1Q91V17 227 aa13.92□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Sod1P08228 154 aaKnown RBP13.92□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 H2-DMb2Q31099 261 aa13.92□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Ndufb8Q9D6J5 186 aa13.92□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Cend1Q9JKC6 149 aa13.92□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Nat6Q9R123 314 aa13.92□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 UngP97931 306 aa13.92□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Cryba2Q9JJV1 197 aa13.92□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Dph3Q8K0W9 82 aa13.92□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Gm11444F6QMA6 170 aa13.92□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Rnf5O35445 180 aa13.92□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Sdr39u1Q5M8N4 308 aa13.92□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Rnf115Q9D0C1 305 aa13.92□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Tnfrsf9P20334 256 aa13.92□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 RhogP84096 191 aa13.92□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 VwceQ3U515 929 aa13.92□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 LtaP09225 202 aa13.92□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Iba57Q8CAK1 358 aaKnown RBP13.92□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Atp5g2P56383 146 aa13.91□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Rbm38Q62176 237 aaKnown RBP13.91□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Trav16d-dv11A0A075B617 117 aa13.91□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Rnase2aQ8K196 155 aa13.91□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Sh2d6Q9D413 297 aa13.91□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Gm28038F7BCN9 126 aa13.91□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Olfr484Q8VFD3 321 aa13.91□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Zpld1Q8BGZ8 415 aa13.91□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Gm17334Q8C6U3 126 aa13.91□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Spint3Q3UW09 88 aa13.91□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Hamp2Q80T19 83 aa13.91□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Trav6d-3A0A075B6B3 112 aa13.91□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Gm42957D6RFQ2 366 aa13.91□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Hist1h2bfP10853 126 aa13.91□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Csrp3P50462 194 aa13.91□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Trav6-3Q5R1E6 112 aa13.91□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Hist1h2bbQ64475 126 aa13.91□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Hist1h2bkQ8CGP1 126 aaKnown RBP13.91□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Hist1h2bpQ8CGP2 126 aaKnown RBP13.91□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 1700025B11RikA0A087WNZ6 93 aa13.91□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Znf691Q3TDE8 283 aa13.9□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Olfr491Q8VG06 310 aa13.9□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 1500009C09RikD3YYW9 81 aa13.9□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Zfp977L7N2E7 438 aa13.9□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 PpyP10601 100 aa13.9□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Gm10842Q3U587 122 aa13.9□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Igkv4-86A0A0G2JGE7 114 aa13.9□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Rnase6Q9D244 153 aa13.9□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Ca2P00920 260 aaKnown RBP13.9□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Arhgap32Q811P8 2089 aa13.9□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Ighv9-3A0A0B4J1J5 117 aa13.9□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Trdv4Q5R1A3 115 aa13.9□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Q8BG31 207 aa13.9□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Gm10439A2AJU2 433 aaKnown RBP13.9□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Gm15114B1B0X6 433 aa13.9□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Rai1Q61818 1889 aa13.89□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Ntn1O09118 604 aa13.89□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Ucp1P12242 307 aa13.89□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Prss28Q924N9 274 aa13.89□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 PspnO70300 156 aa13.89□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 CfdP03953 259 aa13.89□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Cr2P19070 1025 aa13.89□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Loxl2P58022 776 aa13.89□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Fam168aQ8BGZ2 244 aa13.89□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Snx22Q8C084 192 aa13.89□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Defb8Q91V82 60 aa13.89□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Rnf125Q9D9R0 233 aa13.89□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Klk4Q9Z0M1 255 aa13.89□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 2410004P03RikA0A087WQY2 205 aa13.89□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Ighv5-4A0A075B5P9 117 aa13.89□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Klk14Q8CGR5 250 aa13.89□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Trav19A0A0B4J1K4 119 aa13.88□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Olfr779E9PUS9 130 aa13.88□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Hbb-b2P02089 147 aa13.88□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Cd69P37217 199 aa13.88□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Mrpl36Q99N90 102 aa13.88□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Dennd4cA6H8H2 1906 aa13.88□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 D430019H16RikJ3QPM6 83 aa13.88□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Foxg1Q60987 481 aa13.88□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Zdhhc16Q9ESG8 361 aa13.88□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Gpr82Q8BZR0 328 aa13.88□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 52.2 ms