RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Ighv4-1A0A075B5R5 116 aa13.17□□□□□ -0.3
Trim28-201ENSMUST00000005705 Ighv1-15A0A0A6YXA5 117 aa13.17□□□□□ -0.3
Trim28-201ENSMUST00000005705 Rom1P32958 351 aa13.17□□□□□ -0.3
Trim28-201ENSMUST00000005705 Pmis2Q497Q9 96 aa13.17□□□□□ -0.3
Trim28-201ENSMUST00000005705 Zdhhc16Q9ESG8 361 aa13.17□□□□□ -0.3
Trim28-201ENSMUST00000005705 Trappc2lQ9JME7 139 aa13.17□□□□□ -0.3
Trim28-201ENSMUST00000005705 Gm45844A0A1B0GRQ2 137 aa13.17□□□□□ -0.3
Trim28-201ENSMUST00000005705 Tmem238A9JSM3 176 aa13.17□□□□□ -0.3
Trim28-201ENSMUST00000005705 1700084M14RikB1AT01 78 aa13.17□□□□□ -0.3
Trim28-201ENSMUST00000005705 Bet1lO35153 111 aa13.17□□□□□ -0.3
Trim28-201ENSMUST00000005705 Cox6a1P43024 111 aa13.17□□□□□ -0.3
Trim28-201ENSMUST00000005705 Ccl11P48298 97 aa13.17□□□□□ -0.3
Trim28-201ENSMUST00000005705 Olfr411Q7TRW8 315 aa13.17□□□□□ -0.3
Trim28-201ENSMUST00000005705 HeylQ9DBX7 326 aa13.17□□□□□ -0.3
Trim28-201ENSMUST00000005705 Sorl1O88307 2215 aaKnown RBP13.17□□□□□ -0.3
Trim28-201ENSMUST00000005705 Rab33bO35963 229 aa13.17□□□□□ -0.3
Trim28-201ENSMUST00000005705 Dtx1Q61010 627 aa13.17□□□□□ -0.3
Trim28-201ENSMUST00000005705 Eda2rQ8BX35 297 aa13.17□□□□□ -0.3
Trim28-201ENSMUST00000005705 Defa22Q8C1N8 93 aa13.17□□□□□ -0.3
Trim28-201ENSMUST00000005705 Gm21732J3QM79 361 aa13.16□□□□□ -0.3
Trim28-201ENSMUST00000005705 Gm21921J3QNB5 361 aa13.16□□□□□ -0.3
Trim28-201ENSMUST00000005705 Ccl3P10855 92 aa13.16□□□□□ -0.3
Trim28-201ENSMUST00000005705 Tmem167bQ80X45 74 aa13.16□□□□□ -0.3
Trim28-201ENSMUST00000005705 Fhl4Q8CDC8 279 aa13.16□□□□□ -0.3
Trim28-201ENSMUST00000005705 Klk10Q99M20 278 aa13.16□□□□□ -0.3
Trim28-201ENSMUST00000005705 Rnf125Q9D9R0 233 aa13.16□□□□□ -0.3
Trim28-201ENSMUST00000005705 Ighv1-16A0A075B5U1 98 aa13.16□□□□□ -0.3
Trim28-201ENSMUST00000005705 A0A1Y7VMQ4 148 aa13.16□□□□□ -0.3
Trim28-201ENSMUST00000005705 Zfp979A2A799 407 aa13.16□□□□□ -0.3
Trim28-201ENSMUST00000005705 Atp6v0cP63082 155 aa13.16□□□□□ -0.3
Trim28-201ENSMUST00000005705 Folr2Q05685 251 aa13.16□□□□□ -0.3
Trim28-201ENSMUST00000005705 Arl6ip6Q8BH07 226 aa13.16□□□□□ -0.3
Trim28-201ENSMUST00000005705 Rpp25lQ99JH1 163 aa13.16□□□□□ -0.3
Trim28-201ENSMUST00000005705 Q9D8L0 127 aa13.16□□□□□ -0.3
Trim28-201ENSMUST00000005705 Psmb2Q9R1P3 201 aa13.16□□□□□ -0.3
Trim28-201ENSMUST00000005705 Trbv3A0A0A6YYE2 117 aa13.15□□□□□ -0.3
Trim28-201ENSMUST00000005705 Myod1P10085 318 aa13.15□□□□□ -0.3
Trim28-201ENSMUST00000005705 Rnase9P60154 184 aa13.15□□□□□ -0.3
Trim28-201ENSMUST00000005705 Olfr76Q8VFV2 317 aa13.15□□□□□ -0.3
Trim28-201ENSMUST00000005705 Fam162bQ9CX19 157 aa13.15□□□□□ -0.3
Trim28-201ENSMUST00000005705 C5ar1P30993 351 aa13.15□□□□□ -0.3
Trim28-201ENSMUST00000005705 Tmem204Q7TQI0 226 aa13.15□□□□□ -0.3
Trim28-201ENSMUST00000005705 Olfr1535Q7TQU0 326 aa13.15□□□□□ -0.3
Trim28-201ENSMUST00000005705 Trbv19A0A0B4J1H4 117 aa13.15□□□□□ -0.31
Trim28-201ENSMUST00000005705 Olfr1024A2ASU7 327 aa13.15□□□□□ -0.31
Trim28-201ENSMUST00000005705 4933414I15RikQ9D4D5 133 aa13.15□□□□□ -0.31
Trim28-201ENSMUST00000005705 P2ry6Q9ERK9 328 aa13.15□□□□□ -0.31
Trim28-201ENSMUST00000005705 PigpQ9JHG1 132 aa13.15□□□□□ -0.31
Trim28-201ENSMUST00000005705 Slc25a15Q9WVD5 301 aa13.15□□□□□ -0.31
Trim28-201ENSMUST00000005705 Prrx1P63013 245 aa13.14□□□□□ -0.31
Trim28-201ENSMUST00000005705 ArtnQ9Z0L2 224 aa13.14□□□□□ -0.31
Trim28-201ENSMUST00000005705 Ighv1-19A0A0A6YWX0 117 aa13.14□□□□□ -0.31
Trim28-201ENSMUST00000005705 Ighv1-62-2A0A0A6YXZ4 119 aa13.14□□□□□ -0.31
Trim28-201ENSMUST00000005705 CtsgP28293 261 aa13.14□□□□□ -0.31
Trim28-201ENSMUST00000005705 AmelxP63277 210 aa13.13□□□□□ -0.31
Trim28-201ENSMUST00000005705 Nit1Q8VDK1 323 aa13.13□□□□□ -0.31
Trim28-201ENSMUST00000005705 Rnf7Q9WTZ1 113 aa13.13□□□□□ -0.31
Trim28-201ENSMUST00000005705 Npc2Q9Z0J0 149 aa13.13□□□□□ -0.31
Trim28-201ENSMUST00000005705 Ascl5M0QWB7 188 aa13.13□□□□□ -0.31
Trim28-201ENSMUST00000005705 P03980 138 aa13.13□□□□□ -0.31
Trim28-201ENSMUST00000005705 Olfr16Q62007 309 aa13.13□□□□□ -0.31
Trim28-201ENSMUST00000005705 Olfr1265Q8VEZ3 309 aa13.13□□□□□ -0.31
Trim28-201ENSMUST00000005705 Olfr123Q8VFQ1 309 aa13.13□□□□□ -0.31
Trim28-201ENSMUST00000005705 Pkd1l2Q7TN88 2461 aa13.13□□□□□ -0.31
Trim28-201ENSMUST00000005705 Q24JP4 165 aa13.13□□□□□ -0.31
Trim28-201ENSMUST00000005705 Ifna11Q61716 190 aa13.13□□□□□ -0.31
Trim28-201ENSMUST00000005705 Duxbl2Q7TNE6 350 aa13.13□□□□□ -0.31
Trim28-201ENSMUST00000005705 Cphx2Q8BX39 182 aa13.13□□□□□ -0.31
Trim28-201ENSMUST00000005705 Olfr1195Q8VG21 308 aa13.13□□□□□ -0.31
Trim28-201ENSMUST00000005705 Vmn1r119E9Q4H3 307 aa13.12□□□□□ -0.31
Trim28-201ENSMUST00000005705 Gm28305F6U473 122 aa13.12□□□□□ -0.31
Trim28-201ENSMUST00000005705 Iqcf6G3UWF2 157 aa13.12□□□□□ -0.31
Trim28-201ENSMUST00000005705 Tnfaip6O08859 275 aa13.12□□□□□ -0.31
Trim28-201ENSMUST00000005705 Slc25a17O70579 307 aa13.12□□□□□ -0.31
Trim28-201ENSMUST00000005705 Pdlim4P70271 330 aa13.12□□□□□ -0.31
Trim28-201ENSMUST00000005705 H2-M10.4Q85ZW8 331 aa13.12□□□□□ -0.31
Trim28-201ENSMUST00000005705 Olfr303Q8VFP0 319 aa13.12□□□□□ -0.31
Trim28-201ENSMUST00000005705 Ufc1Q9CR09 167 aa13.12□□□□□ -0.31
Trim28-201ENSMUST00000005705 Mlst8Q9DCJ1 326 aa13.12□□□□□ -0.31
Trim28-201ENSMUST00000005705 Lamtor2Q9JHS3 125 aa13.12□□□□□ -0.31
Trim28-201ENSMUST00000005705 IappP12968 93 aa13.12□□□□□ -0.31
Trim28-201ENSMUST00000005705 Rtl4Q3URY0 304 aa13.12□□□□□ -0.31
Trim28-201ENSMUST00000005705 Lrfn3Q8BLY3 626 aa13.12□□□□□ -0.31
Trim28-201ENSMUST00000005705 Gm9949Q8C9F4 104 aa13.12□□□□□ -0.31
Trim28-201ENSMUST00000005705 Olfr869E9PX82 323 aa13.11□□□□□ -0.31
Trim28-201ENSMUST00000005705 Gosr1O88630 250 aa13.11□□□□□ -0.31
Trim28-201ENSMUST00000005705 Emp2O88662 172 aa13.11□□□□□ -0.31
Trim28-201ENSMUST00000005705 OstcQ78XF5 149 aa13.11□□□□□ -0.31
Trim28-201ENSMUST00000005705 Olfr127Q8VF25 323 aa13.11□□□□□ -0.31
Trim28-201ENSMUST00000005705 Cldn16Q925N4 235 aa13.11□□□□□ -0.31
Trim28-201ENSMUST00000005705 Rpl13a-ps1A0A140T8K2 203 aaKnown RBP13.11□□□□□ -0.31
Trim28-201ENSMUST00000005705 Olfr1369-ps1A0A140T8K7 317 aa13.11□□□□□ -0.31
Trim28-201ENSMUST00000005705 Ms4a13Q5FWC3 203 aa13.11□□□□□ -0.31
Trim28-201ENSMUST00000005705 G0s2Q61585 103 aa13.11□□□□□ -0.31
Trim28-201ENSMUST00000005705 Olfr263Q7TQT8 317 aa13.11□□□□□ -0.31
Trim28-201ENSMUST00000005705 Olfr996Q7TRA0 314 aa13.11□□□□□ -0.31
Trim28-201ENSMUST00000005705 Tmem140Q8BGY5 185 aa13.11□□□□□ -0.31
Trim28-201ENSMUST00000005705 Igkv19-93A0A0G2JFZ3 115 aa13.11□□□□□ -0.31
Trim28-201ENSMUST00000005705 Mmp23O88676 391 aa13.11□□□□□ -0.31
Trim28-201ENSMUST00000005705 Tnfsf18Q7TS55 173 aa13.11□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 61.5 ms