RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 TRAV8-3A0A0A6YYJ7 113 aa8.84□□□□□ -0.99
PHGDH-220ENST00000641570 NBDYA0A0U1RRE5 68 aa8.84□□□□□ -0.99
PHGDH-220ENST00000641570 NPSP0C0P6 89 aa8.84□□□□□ -0.99
PHGDH-220ENST00000641570 ERASQ7Z444 233 aa8.84□□□□□ -0.99
PHGDH-220ENST00000641570 ZNF664Q8N3J9 261 aa8.84□□□□□ -0.99
PHGDH-220ENST00000641570 TIMM17AQ99595 171 aa8.84□□□□□ -0.99
PHGDH-220ENST00000641570 PYGO1Q9Y3Y4 419 aa8.84□□□□□ -0.99
PHGDH-220ENST00000641570 IFITM10A6NMD0 228 aa8.83□□□□□ -1
PHGDH-220ENST00000641570 PSCAO43653 123 aa8.83□□□□□ -1
PHGDH-220ENST00000641570 SS18Q15532 418 aa8.83□□□□□ -1
PHGDH-220ENST00000641570 CLPSL2Q6UWE3 100 aa8.83□□□□□ -1
PHGDH-220ENST00000641570 NFE4Q86UQ8 179 aa8.83□□□□□ -1
PHGDH-220ENST00000641570 LINC00269Q8N2A0 174 aa8.83□□□□□ -1
PHGDH-220ENST00000641570 FAM19A2Q8N3H0 131 aa8.83□□□□□ -1
PHGDH-220ENST00000641570 Q9HAA7 133 aa8.83□□□□□ -1
PHGDH-220ENST00000641570 CSDC2Q9Y534 153 aaKnown RBP8.83□□□□□ -1
PHGDH-220ENST00000641570 STARD9Q9P2P6 4700 aa8.83□□□□□ -1
PHGDH-220ENST00000641570 M0R2N4 97 aa8.82□□□□□ -1
PHGDH-220ENST00000641570 PRSS1P07477 247 aa8.82□□□□□ -1
PHGDH-220ENST00000641570 FABP4P15090 132 aa8.82□□□□□ -1
PHGDH-220ENST00000641570 REG3AQ06141 175 aa8.82□□□□□ -1
PHGDH-220ENST00000641570 PDZD11Q5EBL8 140 aa8.82□□□□□ -1
PHGDH-220ENST00000641570 Q6ZUT4 128 aa8.82□□□□□ -1
PHGDH-220ENST00000641570 C1orf43Q9BWL3 253 aa8.82□□□□□ -1
PHGDH-220ENST00000641570 TM2D2Q9BX73 214 aa8.82□□□□□ -1
PHGDH-220ENST00000641570 COX11Q9Y6N1 276 aa8.82□□□□□ -1
PHGDH-220ENST00000641570 LCE6AA0A183 80 aa8.81□□□□□ -1
PHGDH-220ENST00000641570 H0Y8G0 127 aa8.81□□□□□ -1
PHGDH-220ENST00000641570 MRPS36P82909 103 aaKnown RBP8.81□□□□□ -1
PHGDH-220ENST00000641570 MIAQ16674 131 aa8.81□□□□□ -1
PHGDH-220ENST00000641570 URB1-AS1Q96HZ7 61 aa8.81□□□□□ -1
PHGDH-220ENST00000641570 MAP1LC3CQ9BXW4 147 aa8.81□□□□□ -1
PHGDH-220ENST00000641570 IGLV4-60A0A075B6I1 120 aa8.8□□□□□ -1
PHGDH-220ENST00000641570 IGKV2D-24A0A075B6R9 120 aa8.8□□□□□ -1
PHGDH-220ENST00000641570 TRAV13-1A0A0B4J241 112 aa8.8□□□□□ -1
PHGDH-220ENST00000641570 RNASE13Q5GAN3 156 aaKnown RBP8.8□□□□□ -1
PHGDH-220ENST00000641570 COA6Q5JTJ3 125 aaKnown RBP8.8□□□□□ -1
PHGDH-220ENST00000641570 IFI27L1Q96BM0 104 aa8.8□□□□□ -1
PHGDH-220ENST00000641570 CDC42SE2Q9NRR3 84 aa8.8□□□□□ -1
PHGDH-220ENST00000641570 IGLV4-3A0A075B6K6 122 aa8.79□□□□□ -1
PHGDH-220ENST00000641570 TRAV8-4A0A0B4J246 113 aa8.79□□□□□ -1
PHGDH-220ENST00000641570 IBA57-AS1B1ANH7 110 aa8.79□□□□□ -1
PHGDH-220ENST00000641570 CCL25O15444 150 aa8.79□□□□□ -1
PHGDH-220ENST00000641570 SEC11AP67812 179 aa8.79□□□□□ -1
PHGDH-220ENST00000641570 PACRGQ96M98 296 aaPredicted RBP8.79□□□□□ -1
PHGDH-220ENST00000641570 CSMD3Q7Z407 3707 aa8.78□□□□□ -1
PHGDH-220ENST00000641570 C20orf202A1L168 122 aa8.78□□□□□ -1
PHGDH-220ENST00000641570 PMVKQ15126 192 aa8.78□□□□□ -1
PHGDH-220ENST00000641570 Q8N3U1 123 aa8.78□□□□□ -1
PHGDH-220ENST00000641570 GEMIN7Q9H840 131 aaKnown RBP8.78□□□□□ -1
PHGDH-220ENST00000641570 DYNC2H1Q8NCM8 4307 aaKnown RBP8.78□□□□□ -1
PHGDH-220ENST00000641570 IGIPA6NJ69 53 aa8.77□□□□□ -1.01
PHGDH-220ENST00000641570 SNRPEP62304 92 aaKnown RBP8.77□□□□□ -1.01
PHGDH-220ENST00000641570 C1orf134Q5TEV5 83 aa8.77□□□□□ -1.01
PHGDH-220ENST00000641570 C6orf223Q8N319 242 aa8.77□□□□□ -1.01
PHGDH-220ENST00000641570 IGLV10-54A0A075B6I4 117 aa8.76□□□□□ -1.01
PHGDH-220ENST00000641570 MALP21145 153 aa8.76□□□□□ -1.01
PHGDH-220ENST00000641570 XCL1P47992 114 aa8.76□□□□□ -1.01
PHGDH-220ENST00000641570 BAALCQ8WXS3 180 aa8.76□□□□□ -1.01
PHGDH-220ENST00000641570 OPRPNQ99935 248 aaPredicted RBP8.76□□□□□ -1.01
PHGDH-220ENST00000641570 PLECQ15149 4684 aaKnown RBP8.75□□□□□ -1.01
PHGDH-220ENST00000641570 A0A096LNJ9 63 aa8.75□□□□□ -1.01
PHGDH-220ENST00000641570 LINC00959A0A1B0GUT2 108 aa8.75□□□□□ -1.01
PHGDH-220ENST00000641570 NUPR1O60356 82 aa8.75□□□□□ -1.01
PHGDH-220ENST00000641570 LINC00310P59036 64 aa8.75□□□□□ -1.01
PHGDH-220ENST00000641570 KRTDAPP60985 99 aa8.75□□□□□ -1.01
PHGDH-220ENST00000641570 PRR34Q9NV39 138 aa8.75□□□□□ -1.01
PHGDH-220ENST00000641570 EREGO14944 169 aa8.74□□□□□ -1.01
PHGDH-220ENST00000641570 AKR1D1P51857 326 aa8.74□□□□□ -1.01
PHGDH-220ENST00000641570 HERVK_113P63121 156 aa8.74□□□□□ -1.01
PHGDH-220ENST00000641570 HIST3H2BBQ8N257 126 aa8.74□□□□□ -1.01
PHGDH-220ENST00000641570 CHCHD10Q8WYQ3 142 aaPredicted RBP8.74□□□□□ -1.01
PHGDH-220ENST00000641570 CHTOPQ9Y3Y2 248 aaKnown RBP8.74□□□□□ -1.01
PHGDH-220ENST00000641570 TRAV12-1A0A0B4J245 112 aa8.73□□□□□ -1.01
PHGDH-220ENST00000641570 GAGE12HA6NDE8 117 aa8.73□□□□□ -1.01
PHGDH-220ENST00000641570 H3BRM9 83 aa8.73□□□□□ -1.01
PHGDH-220ENST00000641570 APOMO95445 188 aa8.73□□□□□ -1.01
PHGDH-220ENST00000641570 ENHOQ6UWT2 76 aa8.73□□□□□ -1.01
PHGDH-220ENST00000641570 AMELXQ99217 191 aa8.73□□□□□ -1.01
PHGDH-220ENST00000641570 CST9LQ9H4G1 147 aa8.73□□□□□ -1.01
PHGDH-220ENST00000641570 PRSS29PA6NIE9 313 aa8.72□□□□□ -1.01
PHGDH-220ENST00000641570 COX7A2LO14548 114 aa8.72□□□□□ -1.01
PHGDH-220ENST00000641570 CFAP161Q6P656 301 aa8.72□□□□□ -1.01
PHGDH-220ENST00000641570 LINC00469Q8N7U9 141 aa8.72□□□□□ -1.01
PHGDH-220ENST00000641570 C5orf52A6NGY3 159 aa8.71□□□□□ -1.02
PHGDH-220ENST00000641570 PLNP26678 52 aa8.71□□□□□ -1.02
PHGDH-220ENST00000641570 UBE2D1P51668 147 aa8.71□□□□□ -1.02
PHGDH-220ENST00000641570 CD164L2Q6UWJ8 174 aa8.71□□□□□ -1.02
PHGDH-220ENST00000641570 CHAC1Q9BUX1 264 aa8.71□□□□□ -1.02
PHGDH-220ENST00000641570 ALMS1Q8TCU4 4167 aa8.7□□□□□ -1.02
PHGDH-220ENST00000641570 TINCRA0A1B0GVN0 87 aa8.7□□□□□ -1.02
PHGDH-220ENST00000641570 F8VRH5 84 aa8.7□□□□□ -1.02
PHGDH-220ENST00000641570 C14orf177Q52M58 125 aa8.7□□□□□ -1.02
PHGDH-220ENST00000641570 ZC2HC1BQ5TFG8 222 aa8.7□□□□□ -1.02
PHGDH-220ENST00000641570 PET117Q6UWS5 81 aa8.7□□□□□ -1.02
PHGDH-220ENST00000641570 Q6ZR54 194 aa8.7□□□□□ -1.02
PHGDH-220ENST00000641570 HIST1H2BLQ99880 126 aa8.7□□□□□ -1.02
PHGDH-220ENST00000641570 KRTAP1-5Q9BYS1 174 aa8.7□□□□□ -1.02
PHGDH-220ENST00000641570 TENM2Q9NT68 2774 aa8.7□□□□□ -1.02
PHGDH-220ENST00000641570 LYSTQ99698 3801 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms