RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 SPANXA1Q9NS26 97 aa6.17□□□□□ -1.42
SCARB2-225ENST00000640900 RYR2Q92736 4967 aa6.17□□□□□ -1.42
SCARB2-225ENST00000640900 IGLV4-60A0A075B6I1 120 aa6.16□□□□□ -1.42
SCARB2-225ENST00000640900 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.16□□□□□ -1.42
SCARB2-225ENST00000640900 IGKV2-29A2NJV5 120 aaPredicted RBP6.16□□□□□ -1.42
SCARB2-225ENST00000640900 RBX1P62877 108 aa6.16□□□□□ -1.42
SCARB2-225ENST00000640900 GAGE6Q13070 117 aa6.16□□□□□ -1.42
SCARB2-225ENST00000640900 C2orf66Q6UXQ4 117 aa6.16□□□□□ -1.42
SCARB2-225ENST00000640900 Q6ZR54 194 aa6.16□□□□□ -1.42
SCARB2-225ENST00000640900 PACRGQ96M98 296 aaPredicted RBP6.16□□□□□ -1.42
SCARB2-225ENST00000640900 TIMM17AQ99595 171 aa6.16□□□□□ -1.42
SCARB2-225ENST00000640900 CDC42SE2Q9NRR3 84 aa6.16□□□□□ -1.42
SCARB2-225ENST00000640900 PRR34Q9NV39 138 aa6.16□□□□□ -1.42
SCARB2-225ENST00000640900 CYSLTR1Q9Y271 337 aa6.16□□□□□ -1.42
SCARB2-225ENST00000640900 LCE6AA0A183 80 aa6.15□□□□□ -1.42
SCARB2-225ENST00000640900 HBDP02042 147 aa6.15□□□□□ -1.42
SCARB2-225ENST00000640900 RNASEKQ6P5S7 137 aaKnown RBP6.15□□□□□ -1.42
SCARB2-225ENST00000640900 ERASQ7Z444 233 aa6.15□□□□□ -1.42
SCARB2-225ENST00000640900 TMEM18Q96B42 140 aa6.15□□□□□ -1.42
SCARB2-225ENST00000640900 KRTAP1-5Q9BYS1 174 aa6.15□□□□□ -1.42
SCARB2-225ENST00000640900 DNAH11Q96DT5 4516 aa6.14□□□□□ -1.43
SCARB2-225ENST00000640900 IGLV4-3A0A075B6K6 122 aa6.14□□□□□ -1.43
SCARB2-225ENST00000640900 IBA57-AS1B1ANH7 110 aa6.14□□□□□ -1.43
SCARB2-225ENST00000640900 BTF3P20290 206 aaKnown RBP6.14□□□□□ -1.43
SCARB2-225ENST00000640900 SMAGPQ0VAQ4 97 aa6.14□□□□□ -1.43
SCARB2-225ENST00000640900 LINC00173Q6ZV60 143 aa6.14□□□□□ -1.43
SCARB2-225ENST00000640900 Q8N976 141 aa6.14□□□□□ -1.43
SCARB2-225ENST00000640900 TMEM141Q96I45 108 aa6.14□□□□□ -1.43
SCARB2-225ENST00000640900 AMELXQ99217 191 aa6.14□□□□□ -1.43
SCARB2-225ENST00000640900 NBDYA0A0U1RRE5 68 aa6.13□□□□□ -1.43
SCARB2-225ENST00000640900 C5orf52A6NGY3 159 aa6.13□□□□□ -1.43
SCARB2-225ENST00000640900 UBE2L6O14933 153 aa6.13□□□□□ -1.43
SCARB2-225ENST00000640900 HSBP1O75506 76 aa6.13□□□□□ -1.43
SCARB2-225ENST00000640900 NDUFA6P56556 154 aa6.13□□□□□ -1.43
SCARB2-225ENST00000640900 PMCHL1Q16048 86 aa6.13□□□□□ -1.43
SCARB2-225ENST00000640900 KRTAP26-1Q6PEX3 210 aa6.13□□□□□ -1.43
SCARB2-225ENST00000640900 ENHOQ6UWT2 76 aa6.13□□□□□ -1.43
SCARB2-225ENST00000640900 UBE2DNLQ8IWF7 75 aa6.13□□□□□ -1.43
SCARB2-225ENST00000640900 FAM19A2Q8N3H0 131 aa6.13□□□□□ -1.43
SCARB2-225ENST00000640900 ZNF664Q8N3J9 261 aa6.13□□□□□ -1.43
SCARB2-225ENST00000640900 C10orf126Q8N4M7 172 aa6.13□□□□□ -1.43
SCARB2-225ENST00000640900 OPRPNQ99935 248 aaPredicted RBP6.13□□□□□ -1.43
SCARB2-225ENST00000640900 A0A087WX48 190 aa6.12□□□□□ -1.43
SCARB2-225ENST00000640900 IFITM10A6NMD0 228 aa6.12□□□□□ -1.43
SCARB2-225ENST00000640900 TMEM262E9PQX1 116 aa6.12□□□□□ -1.43
SCARB2-225ENST00000640900 IGHV3-30P01768 117 aa6.12□□□□□ -1.43
SCARB2-225ENST00000640900 IGHV3-33P01772 117 aa6.12□□□□□ -1.43
SCARB2-225ENST00000640900 IGHV3-30-3P0DP02 117 aa6.12□□□□□ -1.43
SCARB2-225ENST00000640900 IGHV3-30-5P0DP03 117 aa6.12□□□□□ -1.43
SCARB2-225ENST00000640900 Q6ZUT4 128 aa6.12□□□□□ -1.43
SCARB2-225ENST00000640900 FAM19A3Q7Z5A8 133 aa6.12□□□□□ -1.43
SCARB2-225ENST00000640900 HIST3H2BBQ8N257 126 aa6.12□□□□□ -1.43
SCARB2-225ENST00000640900 OR5A1Q8NGJ0 315 aa6.12□□□□□ -1.43
SCARB2-225ENST00000640900 SCGB3A1Q96QR1 104 aa6.12□□□□□ -1.43
SCARB2-225ENST00000640900 TRAV9-2A0A087WT02 112 aa6.11□□□□□ -1.43
SCARB2-225ENST00000640900 ATP5LO75964 103 aa6.11□□□□□ -1.43
SCARB2-225ENST00000640900 LY6G6CO95867 125 aa6.11□□□□□ -1.43
SCARB2-225ENST00000640900 TTC32Q5I0X7 151 aa6.11□□□□□ -1.43
SCARB2-225ENST00000640900 AMMECR1LQ6DCA0 310 aa6.11□□□□□ -1.43
SCARB2-225ENST00000640900 LINC00269Q8N2A0 174 aa6.11□□□□□ -1.43
SCARB2-225ENST00000640900 KLK12Q9UKR0 248 aa6.11□□□□□ -1.43
SCARB2-225ENST00000640900 RYR3Q15413 4870 aa6.1□□□□□ -1.43
SCARB2-225ENST00000640900 CCL25O15444 150 aa6.1□□□□□ -1.43
SCARB2-225ENST00000640900 Q6ZRN7 208 aaPredicted RBP6.1□□□□□ -1.43
SCARB2-225ENST00000640900 BAALCQ8WXS3 180 aa6.1□□□□□ -1.43
SCARB2-225ENST00000640900 TMEM101Q96IK0 257 aa6.1□□□□□ -1.43
SCARB2-225ENST00000640900 CST9LQ9H4G1 147 aa6.1□□□□□ -1.43
SCARB2-225ENST00000640900 TRAV8-3A0A0A6YYJ7 113 aa6.09□□□□□ -1.43
SCARB2-225ENST00000640900 TRAV8-4A0A0B4J246 113 aa6.09□□□□□ -1.43
SCARB2-225ENST00000640900 LINC00959A0A1B0GUT2 108 aa6.09□□□□□ -1.43
SCARB2-225ENST00000640900 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.09□□□□□ -1.43
SCARB2-225ENST00000640900 LEPROTL1O95214 131 aa6.09□□□□□ -1.43
SCARB2-225ENST00000640900 ANGP03950 147 aaKnown RBP6.09□□□□□ -1.43
SCARB2-225ENST00000640900 UBE2D1P51668 147 aa6.09□□□□□ -1.43
SCARB2-225ENST00000640900 REG3AQ06141 175 aa6.09□□□□□ -1.43
SCARB2-225ENST00000640900 MIAQ16674 131 aa6.09□□□□□ -1.43
SCARB2-225ENST00000640900 PAPPA-AS1Q5QFB9 102 aa6.09□□□□□ -1.43
SCARB2-225ENST00000640900 DGAT2L7PQ6IED9 249 aa6.09□□□□□ -1.43
SCARB2-225ENST00000640900 SPATA12Q7Z6I5 190 aa6.09□□□□□ -1.43
SCARB2-225ENST00000640900 IFI27L1Q96BM0 104 aa6.09□□□□□ -1.43
SCARB2-225ENST00000640900 HIST1H2BLQ99880 126 aa6.09□□□□□ -1.43
SCARB2-225ENST00000640900 HSPB8Q9UJY1 196 aa6.09□□□□□ -1.43
SCARB2-225ENST00000640900 TRAV12-1A0A0B4J245 112 aa6.08□□□□□ -1.44
SCARB2-225ENST00000640900 S100A6P06703 90 aa6.08□□□□□ -1.44
SCARB2-225ENST00000640900 SNRPEP62304 92 aaKnown RBP6.08□□□□□ -1.44
SCARB2-225ENST00000640900 PMVKQ15126 192 aa6.08□□□□□ -1.44
SCARB2-225ENST00000640900 ZC2HC1BQ5TFG8 222 aa6.08□□□□□ -1.44
SCARB2-225ENST00000640900 VCX2Q9H322 139 aa6.08□□□□□ -1.44
SCARB2-225ENST00000640900 PKD1P98161 4303 aa6.08□□□□□ -1.44
SCARB2-225ENST00000640900 PRSS29PA6NIE9 313 aa6.07□□□□□ -1.44
SCARB2-225ENST00000640900 H3BS24 57 aa6.07□□□□□ -1.44
SCARB2-225ENST00000640900 RNASE13Q5GAN3 156 aaKnown RBP6.07□□□□□ -1.44
SCARB2-225ENST00000640900 LINC00242Q5T6M2 205 aa6.07□□□□□ -1.44
SCARB2-225ENST00000640900 Q6ZN92 141 aa6.07□□□□□ -1.44
SCARB2-225ENST00000640900 TEX43Q6ZNM6 134 aa6.07□□□□□ -1.44
SCARB2-225ENST00000640900 UBE2WQ96B02 151 aa6.07□□□□□ -1.44
SCARB2-225ENST00000640900 HECTD4Q9Y4D8 3996 aa6.06□□□□□ -1.44
SCARB2-225ENST00000640900 IGLV4-69A0A075B6H9 119 aa6.06□□□□□ -1.44
SCARB2-225ENST00000640900 IGLV5-45A0A087WSX0 123 aa6.06□□□□□ -1.44
SCARB2-225ENST00000640900 IGHV3OR16-9A0A0B4J2B5 98 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms