RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 UBR3Q6ZT12 1888 aa-0.39□□□□□ -2.47
AP3S1-209ENST00000640413 MAGI2Q86UL8 1455 aa-0.4□□□□□ -2.47
AP3S1-209ENST00000640413 TRAV12-3A0A0B4J271 114 aa-0.4□□□□□ -2.47
AP3S1-209ENST00000640413 ZNF815PA8K554 130 aa-0.4□□□□□ -2.47
AP3S1-209ENST00000640413 CMPK1P30085 196 aa-0.4□□□□□ -2.47
AP3S1-209ENST00000640413 TMEM244Q5VVB8 128 aa-0.4□□□□□ -2.47
AP3S1-209ENST00000640413 SSBP3-AS1Q7Z2R9 100 aa-0.4□□□□□ -2.47
AP3S1-209ENST00000640413 SMIM15Q7Z3B0 74 aa-0.4□□□□□ -2.47
AP3S1-209ENST00000640413 TCTE3Q8IZS6 198 aa-0.4□□□□□ -2.47
AP3S1-209ENST00000640413 MT1MQ8N339 61 aa-0.4□□□□□ -2.47
AP3S1-209ENST00000640413 Q96NJ1 140 aa-0.4□□□□□ -2.47
AP3S1-209ENST00000640413 LRP6O75581 1613 aa-0.4□□□□□ -2.47
AP3S1-209ENST00000640413 ZNF236Q9UL36 1845 aa-0.41□□□□□ -2.47
AP3S1-209ENST00000640413 PLXNA1Q9UIW2 1896 aa-0.41□□□□□ -2.47
AP3S1-209ENST00000640413 BIVM-ERCC5R4GMW8 1640 aa-0.41□□□□□ -2.47
AP3S1-209ENST00000640413 SLIT1O75093 1534 aa-0.41□□□□□ -2.48
AP3S1-209ENST00000640413 TRAV36DV7A0A075B6V5 113 aa-0.41□□□□□ -2.48
AP3S1-209ENST00000640413 TRGV1A0A0A0MS02 117 aa-0.41□□□□□ -2.48
AP3S1-209ENST00000640413 LCE6AA0A183 80 aa-0.41□□□□□ -2.48
AP3S1-209ENST00000640413 M0R3E3 92 aa-0.41□□□□□ -2.48
AP3S1-209ENST00000640413 PRM1P04553 51 aa-0.41□□□□□ -2.48
AP3S1-209ENST00000640413 MT1AP04731 61 aa-0.41□□□□□ -2.48
AP3S1-209ENST00000640413 MT1FP04733 61 aa-0.41□□□□□ -2.48
AP3S1-209ENST00000640413 MT1HP80294 61 aa-0.41□□□□□ -2.48
AP3S1-209ENST00000640413 INSL4Q14641 139 aa-0.41□□□□□ -2.48
AP3S1-209ENST00000640413 DEFB109BQ30KR1 87 aa-0.41□□□□□ -2.48
AP3S1-209ENST00000640413 BATF3Q9NR55 127 aa-0.41□□□□□ -2.48
AP3S1-209ENST00000640413 TSC2P49815 1807 aa-0.41□□□□□ -2.48
AP3S1-209ENST00000640413 CDK5RAP2Q96SN8 1893 aa-0.41□□□□□ -2.48
AP3S1-209ENST00000640413 A0A0D9SFI3 127 aa-0.42□□□□□ -2.48
AP3S1-209ENST00000640413 M0R2T5 61 aa-0.42□□□□□ -2.48
AP3S1-209ENST00000640413 MT2AP02795 61 aa-0.42□□□□□ -2.48
AP3S1-209ENST00000640413 WFDC2Q14508 124 aa-0.42□□□□□ -2.48
AP3S1-209ENST00000640413 ATP11AUNQ6ZP68 121 aa-0.42□□□□□ -2.48
AP3S1-209ENST00000640413 CYP4F30PQ9H0H9 118 aa-0.42□□□□□ -2.48
AP3S1-209ENST00000640413 HSPB11Q9Y547 144 aa-0.42□□□□□ -2.48
AP3S1-209ENST00000640413 MBD5Q9P267 1494 aa-0.42□□□□□ -2.48
AP3S1-209ENST00000640413 XIRP1Q702N8 1843 aaKnown RBP-0.43□□□□□ -2.48
AP3S1-209ENST00000640413 PHIPQ8WWQ0 1821 aa-0.43□□□□□ -2.48
AP3S1-209ENST00000640413 ZMYM4Q5VZL5 1548 aa-0.43□□□□□ -2.48
AP3S1-209ENST00000640413 NRXN2Q9P2S2 1712 aa-0.43□□□□□ -2.48
AP3S1-209ENST00000640413 H0YAA0 97 aa-0.43□□□□□ -2.48
AP3S1-209ENST00000640413 MT1GP13640 62 aa-0.43□□□□□ -2.48
AP3S1-209ENST00000640413 RPS28P62857 69 aaKnown RBP-0.43□□□□□ -2.48
AP3S1-209ENST00000640413 DEFA5Q01523 94 aa-0.43□□□□□ -2.48
AP3S1-209ENST00000640413 DDA1Q9BW61 102 aa-0.43□□□□□ -2.48
AP3S1-209ENST00000640413 CNFNQ9BYD5 112 aa-0.43□□□□□ -2.48
AP3S1-209ENST00000640413 GOLGA3Q08378 1498 aa-0.43□□□□□ -2.48
AP3S1-209ENST00000640413 MYH9P35579 1960 aaKnown RBP-0.43□□□□□ -2.48
AP3S1-209ENST00000640413 ZNF831Q5JPB2 1677 aa-0.43□□□□□ -2.48
AP3S1-209ENST00000640413 BICRAQ9NZM4 1560 aa-0.44□□□□□ -2.48
AP3S1-209ENST00000640413 PTPN23Q9H3S7 1636 aa-0.44□□□□□ -2.48
AP3S1-209ENST00000640413 TRAV1-2A0A0B4J238 106 aa-0.44□□□□□ -2.48
AP3S1-209ENST00000640413 A0A1B0GX51 115 aa-0.44□□□□□ -2.48
AP3S1-209ENST00000640413 TNFSF15O95150 251 aa-0.44□□□□□ -2.48
AP3S1-209ENST00000640413 SPAG11BQ08648 103 aa-0.44□□□□□ -2.48
AP3S1-209ENST00000640413 KLK9Q2XQG4 91 aa-0.44□□□□□ -2.48
AP3S1-209ENST00000640413 RPL7L1Q6DKI1 246 aaKnown RBP-0.44□□□□□ -2.48
AP3S1-209ENST00000640413 HIGD1AQ9Y241 93 aa-0.44□□□□□ -2.48
AP3S1-209ENST00000640413 LSM2Q9Y333 95 aaKnown RBP-0.44□□□□□ -2.48
AP3S1-209ENST00000640413 ERCC6Q03468 1493 aa-0.44□□□□□ -2.48
AP3S1-209ENST00000640413 ARAP1Q96P48 1450 aa-0.44□□□□□ -2.48
AP3S1-209ENST00000640413 CUL7Q14999 1698 aa-0.44□□□□□ -2.48
AP3S1-209ENST00000640413 DOCK1Q14185 1865 aa-0.44□□□□□ -2.48
AP3S1-209ENST00000640413 DOCK11Q5JSL3 2073 aa-0.44□□□□□ -2.48
AP3S1-209ENST00000640413 TRAV22A0A0B4J277 110 aa-0.45□□□□□ -2.48
AP3S1-209ENST00000640413 M0R2P5 195 aa-0.45□□□□□ -2.48
AP3S1-209ENST00000640413 SCTP09683 121 aa-0.45□□□□□ -2.48
AP3S1-209ENST00000640413 SPINK8P0C7L1 97 aa-0.45□□□□□ -2.48
AP3S1-209ENST00000640413 NEFHP12036 1026 aa-0.45□□□□□ -2.48
AP3S1-209ENST00000640413 EDDM3BP56851 147 aa-0.45□□□□□ -2.48
AP3S1-209ENST00000640413 MT1XP80297 61 aa-0.45□□□□□ -2.48
AP3S1-209ENST00000640413 CCDC153Q494R4 210 aa-0.45□□□□□ -2.48
AP3S1-209ENST00000640413 Q8IZM0 81 aa-0.45□□□□□ -2.48
AP3S1-209ENST00000640413 SELENOSQ9BQE4 189 aa-0.45□□□□□ -2.48
AP3S1-209ENST00000640413 NDUFA12Q9UI09 145 aa-0.45□□□□□ -2.48
AP3S1-209ENST00000640413 GINS2Q9Y248 185 aa-0.45□□□□□ -2.48
AP3S1-209ENST00000640413 AKAP11Q9UKA4 1901 aa-0.45□□□□□ -2.48
AP3S1-209ENST00000640413 ADGRL2O95490 1459 aa-0.46□□□□□ -2.48
AP3S1-209ENST00000640413 CHD1O14646 1710 aa-0.46□□□□□ -2.48
AP3S1-209ENST00000640413 BCORQ6W2J9 1755 aa-0.46□□□□□ -2.48
AP3S1-209ENST00000640413 PAPPA2Q9BXP8 1791 aa-0.46□□□□□ -2.48
AP3S1-209ENST00000640413 ARHGEF12Q9NZN5 1544 aa-0.46□□□□□ -2.48
AP3S1-209ENST00000640413 TRBV10-3A0A0K0K1G6 114 aa-0.46□□□□□ -2.48
AP3S1-209ENST00000640413 MT1EP04732 61 aa-0.46□□□□□ -2.48
AP3S1-209ENST00000640413 SMIM6P0DI80 62 aa-0.46□□□□□ -2.48
AP3S1-209ENST00000640413 SPRR1AP35321 89 aa-0.46□□□□□ -2.48
AP3S1-209ENST00000640413 NCS1P62166 190 aa-0.46□□□□□ -2.48
AP3S1-209ENST00000640413 SPANXN1Q5VSR9 72 aa-0.46□□□□□ -2.48
AP3S1-209ENST00000640413 LINC01545Q5VT33 79 aa-0.46□□□□□ -2.48
AP3S1-209ENST00000640413 PARP14Q460N5 1801 aa-0.46□□□□□ -2.48
AP3S1-209ENST00000640413 ADAMTS12P58397 1594 aa-0.46□□□□□ -2.48
AP3S1-209ENST00000640413 USP32Q8NFA0 1604 aa-0.46□□□□□ -2.48
AP3S1-209ENST00000640413 RAPGEF6Q8TEU7 1601 aa-0.46□□□□□ -2.48
AP3S1-209ENST00000640413 CICQ96RK0 1608 aaPredicted RBP-0.46□□□□□ -2.48
AP3S1-209ENST00000640413 MARF1Q9Y4F3 1742 aaKnown RBP-0.47□□□□□ -2.48
AP3S1-209ENST00000640413 IQSEC2Q5JU85 1478 aa-0.47□□□□□ -2.48
AP3S1-209ENST00000640413 ADGRB1O14514 1584 aa-0.47□□□□□ -2.48
AP3S1-209ENST00000640413 FAM92AA1XBS5 289 aa-0.47□□□□□ -2.48
AP3S1-209ENST00000640413 A6NIN4 97 aa-0.47□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms