RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 ZNF727A8MUV8 499 aa2.53□□□□□ -2
RFC1-217ENST00000639695 SYS1-DBNDD2H3BUS1 97 aa2.53□□□□□ -2
RFC1-217ENST00000639695 H3BUT2 72 aa2.53□□□□□ -2
RFC1-217ENST00000639695 MT-ATP8P03928 68 aa2.53□□□□□ -2
RFC1-217ENST00000639695 IGLC6P0CF74 106 aa2.53□□□□□ -2
RFC1-217ENST00000639695 SMIM11AP58511 58 aa2.53□□□□□ -2
RFC1-217ENST00000639695 PLGLB1Q02325 96 aa2.53□□□□□ -2
RFC1-217ENST00000639695 CASC2Q6XLA1 102 aa2.53□□□□□ -2
RFC1-217ENST00000639695 CD163L1Q9NR16 1453 aa2.52□□□□□ -2.01
RFC1-217ENST00000639695 TRBV20-1A0A075B6N2 111 aa2.52□□□□□ -2.01
RFC1-217ENST00000639695 TCRAP04437 139 aa2.52□□□□□ -2.01
RFC1-217ENST00000639695 SLC25A5P05141 298 aaKnown RBP2.52□□□□□ -2.01
RFC1-217ENST00000639695 SMIM13P0DJ93 91 aa2.52□□□□□ -2.01
RFC1-217ENST00000639695 UBE2G1P62253 170 aa2.52□□□□□ -2.01
RFC1-217ENST00000639695 SNRPFP62306 86 aaKnown RBP2.52□□□□□ -2.01
RFC1-217ENST00000639695 C12orf73Q69YU5 71 aa2.52□□□□□ -2.01
RFC1-217ENST00000639695 ATOH7Q8N100 152 aa2.52□□□□□ -2.01
RFC1-217ENST00000639695 OR10AC1Q8NH08 325 aa2.52□□□□□ -2.01
RFC1-217ENST00000639695 OTOSQ8NHW6 89 aa2.52□□□□□ -2.01
RFC1-217ENST00000639695 LSM10Q969L4 123 aaKnown RBP2.52□□□□□ -2.01
RFC1-217ENST00000639695 LINC00526Q96FQ7 95 aa2.52□□□□□ -2.01
RFC1-217ENST00000639695 CMC2Q9NRP2 79 aa2.52□□□□□ -2.01
RFC1-217ENST00000639695 KCPQ6ZWJ8 1503 aa2.52□□□□□ -2.01
RFC1-217ENST00000639695 COL1A1P02452 1464 aaPredicted RBP2.52□□□□□ -2.01
RFC1-217ENST00000639695 ARFGEF1Q9Y6D6 1849 aa2.52□□□□□ -2.01
RFC1-217ENST00000639695 TNRC6AQ8NDV7 1962 aaKnown RBP2.51□□□□□ -2.01
RFC1-217ENST00000639695 LOC110117498A0A087WWA1 95 aa2.51□□□□□ -2.01
RFC1-217ENST00000639695 FAM24AA6NFZ4 105 aa2.51□□□□□ -2.01
RFC1-217ENST00000639695 M0R2N4 97 aa2.51□□□□□ -2.01
RFC1-217ENST00000639695 M0R2P5 195 aa2.51□□□□□ -2.01
RFC1-217ENST00000639695 INE1O15225 51 aa2.51□□□□□ -2.01
RFC1-217ENST00000639695 CAV3P56539 151 aa2.51□□□□□ -2.01
RFC1-217ENST00000639695 BLCAPP62952 87 aa2.51□□□□□ -2.01
RFC1-217ENST00000639695 Q56UQ5 140 aa2.51□□□□□ -2.01
RFC1-217ENST00000639695 RPL7L1Q6DKI1 246 aaKnown RBP2.51□□□□□ -2.01
RFC1-217ENST00000639695 LINC00269Q8N2A0 174 aa2.51□□□□□ -2.01
RFC1-217ENST00000639695 FAM213BQ8TBF2 198 aa2.51□□□□□ -2.01
RFC1-217ENST00000639695 PLXNA4Q9HCM2 1894 aa2.5□□□□□ -2.01
RFC1-217ENST00000639695 SIP14410 1827 aa2.5□□□□□ -2.01
RFC1-217ENST00000639695 PIGBOS1A0A0B4J2F0 54 aa2.5□□□□□ -2.01
RFC1-217ENST00000639695 SSSCA1O60232 199 aa2.5□□□□□ -2.01
RFC1-217ENST00000639695 NUPR1O60356 82 aa2.5□□□□□ -2.01
RFC1-217ENST00000639695 DNAL4O96015 105 aa2.5□□□□□ -2.01
RFC1-217ENST00000639695 C3orf79P0CE67 100 aa2.5□□□□□ -2.01
RFC1-217ENST00000639695 COX8AP10176 69 aa2.5□□□□□ -2.01
RFC1-217ENST00000639695 ETDBQ3ZM63 59 aa2.5□□□□□ -2.01
RFC1-217ENST00000639695 SPRNQ5BIV9 151 aa2.5□□□□□ -2.01
RFC1-217ENST00000639695 SMIM7Q9BQ49 75 aa2.5□□□□□ -2.01
RFC1-217ENST00000639695 ARL2-SNX15V9GYD0 113 aa2.5□□□□□ -2.01
RFC1-217ENST00000639695 LOC285556D6RIA3 1793 aa2.5□□□□□ -2.01
RFC1-217ENST00000639695 FREM3P0C091 2139 aa2.5□□□□□ -2.01
RFC1-217ENST00000639695 HEATR1Q9H583 2144 aaKnown RBP2.5□□□□□ -2.01
RFC1-217ENST00000639695 TRBV7-7A0A0K0K1E9 115 aa2.49□□□□□ -2.01
RFC1-217ENST00000639695 CD3DP04234 171 aa2.49□□□□□ -2.01
RFC1-217ENST00000639695 QRFPP83859 136 aa2.49□□□□□ -2.01
RFC1-217ENST00000639695 MYOZ3Q8TDC0 251 aa2.49□□□□□ -2.01
RFC1-217ENST00000639695 MGST2Q99735 147 aa2.49□□□□□ -2.01
RFC1-217ENST00000639695 NABP2Q9BQ15 211 aa2.49□□□□□ -2.01
RFC1-217ENST00000639695 C20orf78Q9BR46 151 aa2.49□□□□□ -2.01
RFC1-217ENST00000639695 FAM103A1Q9BTL3 118 aaKnown RBP2.49□□□□□ -2.01
RFC1-217ENST00000639695 TMEM14CQ9P0S9 112 aa2.49□□□□□ -2.01
RFC1-217ENST00000639695 TNRC6CQ9HCJ0 1690 aaKnown RBP2.48□□□□□ -2.01
RFC1-217ENST00000639695 IGHV1-24A0A0C4DH33 117 aa2.48□□□□□ -2.01
RFC1-217ENST00000639695 ATOX1O00244 68 aa2.48□□□□□ -2.01
RFC1-217ENST00000639695 RBP4P02753 201 aa2.48□□□□□ -2.01
RFC1-217ENST00000639695 PYYP10082 97 aa2.48□□□□□ -2.01
RFC1-217ENST00000639695 S100A3P33764 101 aa2.48□□□□□ -2.01
RFC1-217ENST00000639695 ATP5EP56381 51 aaPredicted RBP2.48□□□□□ -2.01
RFC1-217ENST00000639695 NPC2P61916 151 aa2.48□□□□□ -2.01
RFC1-217ENST00000639695 MIR22HGQ0VDD5 57 aa2.48□□□□□ -2.01
RFC1-217ENST00000639695 LINC01545Q5VT33 79 aa2.48□□□□□ -2.01
RFC1-217ENST00000639695 HIGD1BQ9P298 99 aa2.48□□□□□ -2.01
RFC1-217ENST00000639695 DNAJC15Q9Y5T4 150 aa2.48□□□□□ -2.01
RFC1-217ENST00000639695 FANCMQ8IYD8 2048 aa2.47□□□□□ -2.01
RFC1-217ENST00000639695 TRAV12-2A0A075B6T6 113 aa2.47□□□□□ -2.01
RFC1-217ENST00000639695 FAM236AA0A1B0GUQ0 79 aa2.47□□□□□ -2.01
RFC1-217ENST00000639695 FAM236BA0A1B0GV22 79 aa2.47□□□□□ -2.01
RFC1-217ENST00000639695 ACYP1P07311 99 aa2.47□□□□□ -2.01
RFC1-217ENST00000639695 CCL4P13236 92 aa2.47□□□□□ -2.01
RFC1-217ENST00000639695 HLA-DRB4P13762 266 aa2.47□□□□□ -2.01
RFC1-217ENST00000639695 CBLN1P23435 193 aa2.47□□□□□ -2.01
RFC1-217ENST00000639695 CKS2P33552 79 aa2.47□□□□□ -2.01
RFC1-217ENST00000639695 UBE2L3P68036 154 aaKnown RBP2.47□□□□□ -2.01
RFC1-217ENST00000639695 NMSQ5H8A3 153 aa2.47□□□□□ -2.01
RFC1-217ENST00000639695 GDF5OSQ5U4N7 250 aa2.47□□□□□ -2.01
RFC1-217ENST00000639695 C6orf201Q7Z4U5 140 aa2.47□□□□□ -2.01
RFC1-217ENST00000639695 DPH3Q96FX2 82 aa2.47□□□□□ -2.01
RFC1-217ENST00000639695 AMELYQ99218 206 aa2.47□□□□□ -2.01
RFC1-217ENST00000639695 GNG13Q9P2W3 67 aa2.47□□□□□ -2.01
RFC1-217ENST00000639695 SERP1Q9Y6X1 66 aa2.47□□□□□ -2.01
RFC1-217ENST00000639695 HLA-DRB4X5D2U9 266 aa2.47□□□□□ -2.01
RFC1-217ENST00000639695 NINQ8N4C6 2090 aa2.46□□□□□ -2.01
RFC1-217ENST00000639695 ANKRD36A6QL64 1941 aa2.46□□□□□ -2.02
RFC1-217ENST00000639695 IGLV3-32A0A0A0MS00 114 aa2.46□□□□□ -2.02
RFC1-217ENST00000639695 TRAV2A0A0B4J234 112 aa2.46□□□□□ -2.02
RFC1-217ENST00000639695 GYPBP06028 91 aa2.46□□□□□ -2.02
RFC1-217ENST00000639695 PCBD1P61457 104 aa2.46□□□□□ -2.02
RFC1-217ENST00000639695 WFDC2Q14508 124 aa2.46□□□□□ -2.02
RFC1-217ENST00000639695 CFAP126Q5VTH2 177 aa2.46□□□□□ -2.02
RFC1-217ENST00000639695 NCBP2-AS2Q69YL0 99 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms