RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 GAGE13Q4V321 117 aa15.34■□□□□ 0.05
CLN6-224ENST00000638076 TIMM21Q9BVV7 248 aa15.34■□□□□ 0.05
CLN6-224ENST00000638076 IGHV3-30-3P0DP02 117 aa15.34■□□□□ 0.05
CLN6-224ENST00000638076 UBE2D1P51668 147 aa15.33■□□□□ 0.05
CLN6-224ENST00000638076 OCIAD2Q56VL3 154 aa15.33■□□□□ 0.05
CLN6-224ENST00000638076 DGAT2L7PQ6IED9 249 aa15.33■□□□□ 0.05
CLN6-224ENST00000638076 DAZ4Q86SG3 579 aaKnown RBP15.33■□□□□ 0.05
CLN6-224ENST00000638076 OVOL2Q9BRP0 275 aa15.33■□□□□ 0.05
CLN6-224ENST00000638076 DAZ3Q9NR90 486 aaKnown RBP15.33■□□□□ 0.05
CLN6-224ENST00000638076 TRAV8-3A0A0A6YYJ7 113 aa15.33■□□□□ 0.04
CLN6-224ENST00000638076 UBE2D3P61077 147 aa15.33■□□□□ 0.04
CLN6-224ENST00000638076 UBE2D2P62837 147 aa15.33■□□□□ 0.04
CLN6-224ENST00000638076 NTM-AS1Q6ZSK4 140 aa15.32■□□□□ 0.04
CLN6-224ENST00000638076 LINC00694P0DN24 101 aa15.31■□□□□ 0.04
CLN6-224ENST00000638076 VPS25Q9BRG1 176 aa15.31■□□□□ 0.04
CLN6-224ENST00000638076 IGHV1-58A0A0C4DH39 117 aa15.31■□□□□ 0.04
CLN6-224ENST00000638076 C10orf126Q8N4M7 172 aa15.31■□□□□ 0.04
CLN6-224ENST00000638076 PGPEP1Q9NXJ5 209 aa15.31■□□□□ 0.04
CLN6-224ENST00000638076 APOMO95445 188 aa15.29■□□□□ 0.04
CLN6-224ENST00000638076 GEMIN7Q9H840 131 aaKnown RBP15.29■□□□□ 0.04
CLN6-224ENST00000638076 SPINK8P0C7L1 97 aa15.28■□□□□ 0.04
CLN6-224ENST00000638076 SPATA3Q8NHX4 192 aa15.28■□□□□ 0.04
CLN6-224ENST00000638076 VSIG2Q96IQ7 327 aa15.28■□□□□ 0.04
CLN6-224ENST00000638076 LOC100131303A0A0U1RQF7 123 aa15.27■□□□□ 0.04
CLN6-224ENST00000638076 TRGV4A0A0C4DH28 118 aa15.27■□□□□ 0.03
CLN6-224ENST00000638076 A0A0J9YXY3 114 aa15.27■□□□□ 0.03
CLN6-224ENST00000638076 TRBV6-4A0A1B0GX49 114 aa15.27■□□□□ 0.03
CLN6-224ENST00000638076 A8MZ25 164 aa15.26■□□□□ 0.03
CLN6-224ENST00000638076 CIDEAO60543 219 aa15.26■□□□□ 0.03
CLN6-224ENST00000638076 SBSPONQ8IVN8 264 aa15.26■□□□□ 0.03
CLN6-224ENST00000638076 CDKN2A-AS1Q9UH64 79 aa15.26■□□□□ 0.03
CLN6-224ENST00000638076 C2CD3Q4AC94 2353 aa15.26■□□□□ 0.03
CLN6-224ENST00000638076 TMEM238C9JI98 176 aa15.25■□□□□ 0.03
CLN6-224ENST00000638076 CRLF1O75462 422 aa15.25■□□□□ 0.03
CLN6-224ENST00000638076 CFC1BP0CG36 223 aa15.25■□□□□ 0.03
CLN6-224ENST00000638076 CFC1P0CG37 223 aa15.25■□□□□ 0.03
CLN6-224ENST00000638076 INSL3P51460 131 aa15.25■□□□□ 0.03
CLN6-224ENST00000638076 TIRAPP58753 221 aa15.25■□□□□ 0.03
CLN6-224ENST00000638076 CSDC2Q9Y534 153 aaKnown RBP15.25■□□□□ 0.03
CLN6-224ENST00000638076 FN1P02751 2386 aaKnown RBP15.25■□□□□ 0.03
CLN6-224ENST00000638076 K7ERU9 68 aa15.25■□□□□ 0.03
CLN6-224ENST00000638076 NDUFA12Q9UI09 145 aa15.25■□□□□ 0.03
CLN6-224ENST00000638076 TSPAN13O95857 204 aa15.24■□□□□ 0.03
CLN6-224ENST00000638076 C9orf66Q5T8R8 295 aa15.24■□□□□ 0.03
CLN6-224ENST00000638076 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.24■□□□□ 0.03
CLN6-224ENST00000638076 GTSF1LQ9H1H1 148 aa15.24■□□□□ 0.03
CLN6-224ENST00000638076 NSD1Q96L73 2696 aaPredicted RBP15.24■□□□□ 0.03
CLN6-224ENST00000638076 COX6A2Q02221 97 aa15.23■□□□□ 0.03
CLN6-224ENST00000638076 IGLV5-45A0A087WSX0 123 aa15.23■□□□□ 0.03
CLN6-224ENST00000638076 H3BMG7 143 aa15.23■□□□□ 0.03
CLN6-224ENST00000638076 FHL2Q14192 279 aa15.23■□□□□ 0.03
CLN6-224ENST00000638076 MUSTN1Q8IVN3 82 aa15.22■□□□□ 0.03
CLN6-224ENST00000638076 LINC00242Q5T6M2 205 aa15.22■□□□□ 0.03
CLN6-224ENST00000638076 A4D1N5 150 aa15.21■□□□□ 0.03
CLN6-224ENST00000638076 UBE2L6O14933 153 aa15.21■□□□□ 0.03
CLN6-224ENST00000638076 TMEM243Q9BU79 118 aa15.21■□□□□ 0.03
CLN6-224ENST00000638076 VWFP04275 2813 aa15.21■□□□□ 0.03
CLN6-224ENST00000638076 HERVK_113P63121 156 aa15.21■□□□□ 0.02
CLN6-224ENST00000638076 CDC42SE2Q9NRR3 84 aa15.21■□□□□ 0.02
CLN6-224ENST00000638076 TRAV13-1A0A0B4J241 112 aa15.2■□□□□ 0.02
CLN6-224ENST00000638076 DEFB130BP0DP73 79 aa15.2■□□□□ 0.02
CLN6-224ENST00000638076 DEFB130AP0DP74 79 aa15.2■□□□□ 0.02
CLN6-224ENST00000638076 RPL24P83731 157 aaKnown RBP15.2■□□□□ 0.02
CLN6-224ENST00000638076 SMAGPQ0VAQ4 97 aa15.2■□□□□ 0.02
CLN6-224ENST00000638076 SFTA2Q6UW10 78 aa15.2■□□□□ 0.02
CLN6-224ENST00000638076 LITAFQ99732 161 aa15.2■□□□□ 0.02
CLN6-224ENST00000638076 ZFAND6Q6FIF0 208 aa15.2■□□□□ 0.02
CLN6-224ENST00000638076 TMEM101Q96IK0 257 aa15.19■□□□□ 0.02
CLN6-224ENST00000638076 FAM19A3Q7Z5A8 133 aa15.18■□□□□ 0.02
CLN6-224ENST00000638076 KIR2DL5BQ8NHK3 375 aa15.18■□□□□ 0.02
CLN6-224ENST00000638076 PRO1854Q9UHT4 67 aa15.18■□□□□ 0.02
CLN6-224ENST00000638076 X6R8D5 127 aa15.18■□□□□ 0.02
CLN6-224ENST00000638076 HIVEP1P15822 2718 aa15.17■□□□□ 0.02
CLN6-224ENST00000638076 LOC107984156A0A0G2JMH3 177 aa15.17■□□□□ 0.02
CLN6-224ENST00000638076 ARL17AQ8IVW1 177 aa15.17■□□□□ 0.02
CLN6-224ENST00000638076 F8W1H4 67 aa15.17■□□□□ 0.02
CLN6-224ENST00000638076 ADAMTSL4-AS1Q5T5F5 129 aa15.16■□□□□ 0.02
CLN6-224ENST00000638076 CITED1Q99966 193 aa15.16■□□□□ 0.02
CLN6-224ENST00000638076 EIF4EBP3O60516 100 aaPredicted RBP15.16■□□□□ 0.02
CLN6-224ENST00000638076 LINC00612Q8N6U2 182 aa15.15■□□□□ 0.02
CLN6-224ENST00000638076 WFDC2Q14508 124 aa15.15■□□□□ 0.02
CLN6-224ENST00000638076 H7C423 109 aa15.14■□□□□ 0.01
CLN6-224ENST00000638076 PRSS2P07478 247 aa15.14■□□□□ 0.01
CLN6-224ENST00000638076 MTURNQ8N3F0 131 aa15.14■□□□□ 0.01
CLN6-224ENST00000638076 IGLV5-39A0A0G2JS06 123 aa15.14■□□□□ 0.01
CLN6-224ENST00000638076 SPANXDQ9BXN6 97 aa15.14■□□□□ 0.01
CLN6-224ENST00000638076 SPANXCQ9NY87 97 aa15.14■□□□□ 0.01
CLN6-224ENST00000638076 A0A0B4J2C4 111 aa15.13■□□□□ 0.01
CLN6-224ENST00000638076 SMIM9A6NGZ8 99 aa15.13■□□□□ 0.01
CLN6-224ENST00000638076 GAGE6Q13070 117 aa15.13■□□□□ 0.01
CLN6-224ENST00000638076 TENM1Q9UKZ4 2725 aa15.13■□□□□ 0.01
CLN6-224ENST00000638076 TRBV6-8A0A0A6YYG3 113 aa15.12■□□□□ 0.01
CLN6-224ENST00000638076 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.12■□□□□ 0.01
CLN6-224ENST00000638076 NDUFA1O15239 70 aa15.12■□□□□ 0.01
CLN6-224ENST00000638076 SMIM1B2RUZ4 78 aa15.12■□□□□ 0.01
CLN6-224ENST00000638076 PSMB2P49721 201 aa15.12■□□□□ 0.01
CLN6-224ENST00000638076 MIAQ16674 131 aa15.11■□□□□ 0.01
CLN6-224ENST00000638076 PRO0461Q9UI25 63 aa15.11■□□□□ 0.01
CLN6-224ENST00000638076 LYRM7Q5U5X0 104 aa15.11■□□□□ 0.01
CLN6-224ENST00000638076 IGHV3-33P01772 117 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms