RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 ZNF524Q96C55 264 aa12.39□□□□□ -0.43
CACNA1A-258ENST00000638029 I3L2K1 104 aa12.39□□□□□ -0.43
CACNA1A-258ENST00000638029 C1orf147Q96MC9 270 aaPredicted RBP12.39□□□□□ -0.43
CACNA1A-258ENST00000638029 K7EIM0 57 aa12.39□□□□□ -0.43
CACNA1A-258ENST00000638029 LINC00694P0DN24 101 aa12.39□□□□□ -0.43
CACNA1A-258ENST00000638029 SPANXB1Q9NS25 103 aaPredicted RBP12.39□□□□□ -0.43
CACNA1A-258ENST00000638029 IGLV2-14P01704 120 aa12.38□□□□□ -0.43
CACNA1A-258ENST00000638029 CCKP06307 115 aa12.38□□□□□ -0.43
CACNA1A-258ENST00000638029 IGLV5-52A0A0A0MRZ9 124 aa12.38□□□□□ -0.43
CACNA1A-258ENST00000638029 TRBV10-1A0A0K0K1A3 114 aa12.38□□□□□ -0.43
CACNA1A-258ENST00000638029 ZFAND2AQ8N6M9 145 aa12.38□□□□□ -0.43
CACNA1A-258ENST00000638029 IL15RAQ13261 267 aa12.38□□□□□ -0.43
CACNA1A-258ENST00000638029 UNQ9165/PRO28630Q6UXU0 137 aa12.38□□□□□ -0.43
CACNA1A-258ENST00000638029 SPATA12Q7Z6I5 190 aa12.37□□□□□ -0.43
CACNA1A-258ENST00000638029 E9PLD3 99 aa12.37□□□□□ -0.43
CACNA1A-258ENST00000638029 C11orf53Q8IXP5 236 aa12.37□□□□□ -0.43
CACNA1A-258ENST00000638029 C11orf86A6NJI1 115 aa12.37□□□□□ -0.43
CACNA1A-258ENST00000638029 H3BT86 120 aa12.37□□□□□ -0.43
CACNA1A-258ENST00000638029 SHISA2Q6UWI4 295 aa12.37□□□□□ -0.43
CACNA1A-258ENST00000638029 ZFHX2Q9C0A1 2572 aaPredicted RBP12.36□□□□□ -0.43
CACNA1A-258ENST00000638029 TRBV27A0A0K0K1C4 114 aa12.36□□□□□ -0.43
CACNA1A-258ENST00000638029 CCDC179H3BU77 68 aa12.36□□□□□ -0.43
CACNA1A-258ENST00000638029 ESRGQ1W209 222 aa12.36□□□□□ -0.43
CACNA1A-258ENST00000638029 DAZAP2Q15038 168 aaPredicted RBP12.35□□□□□ -0.43
CACNA1A-258ENST00000638029 UFSP1Q6NVU6 142 aa12.35□□□□□ -0.43
CACNA1A-258ENST00000638029 M0QXV9 152 aa12.35□□□□□ -0.43
CACNA1A-258ENST00000638029 IGLV3-1P01715 115 aa12.34□□□□□ -0.43
CACNA1A-258ENST00000638029 NDUFA7O95182 113 aa12.34□□□□□ -0.43
CACNA1A-258ENST00000638029 CLUHP3Q96NS8 147 aa12.34□□□□□ -0.43
CACNA1A-258ENST00000638029 LINC00467Q9BRT7 94 aa12.34□□□□□ -0.43
CACNA1A-258ENST00000638029 TRAV10A0A0B4J240 114 aa12.34□□□□□ -0.43
CACNA1A-258ENST00000638029 LINC00337Q8N6G1 96 aa12.33□□□□□ -0.43
CACNA1A-258ENST00000638029 ZNF706Q9Y5V0 76 aaPredicted RBP12.33□□□□□ -0.43
CACNA1A-258ENST00000638029 TMEM223A0PJW6 202 aa12.32□□□□□ -0.44
CACNA1A-258ENST00000638029 SOSTDC1Q6X4U4 206 aa12.32□□□□□ -0.44
CACNA1A-258ENST00000638029 KPRPQ5T749 579 aaPredicted RBP12.32□□□□□ -0.44
CACNA1A-258ENST00000638029 SMR3AQ99954 134 aa12.32□□□□□ -0.44
CACNA1A-258ENST00000638029 HIGD1BQ9P298 99 aa12.32□□□□□ -0.44
CACNA1A-258ENST00000638029 OXLD1Q5BKU9 147 aa12.32□□□□□ -0.44
CACNA1A-258ENST00000638029 CELA1Q9UNI1 258 aa12.32□□□□□ -0.44
CACNA1A-258ENST00000638029 BDP1A6H8Y1 2624 aa12.32□□□□□ -0.44
CACNA1A-258ENST00000638029 PLA2G5P39877 138 aa12.31□□□□□ -0.44
CACNA1A-258ENST00000638029 MIAQ16674 131 aa12.31□□□□□ -0.44
CACNA1A-258ENST00000638029 LTBP2Q14767 1821 aa12.31□□□□□ -0.44
CACNA1A-258ENST00000638029 ZNF843Q8N446 348 aa12.31□□□□□ -0.44
CACNA1A-258ENST00000638029 ATP5EP56381 51 aaPredicted RBP12.31□□□□□ -0.44
CACNA1A-258ENST00000638029 K7EMT4 169 aa12.31□□□□□ -0.44
CACNA1A-258ENST00000638029 PDE6GP18545 87 aa12.3□□□□□ -0.44
CACNA1A-258ENST00000638029 LOC100131303A0A0U1RQF7 123 aa12.3□□□□□ -0.44
CACNA1A-258ENST00000638029 WFDC10AQ9H1F0 79 aa12.3□□□□□ -0.44
CACNA1A-258ENST00000638029 COL4A4P53420 1690 aaPredicted RBP12.3□□□□□ -0.44
CACNA1A-258ENST00000638029 NDUFC1O43677 76 aa12.29□□□□□ -0.44
CACNA1A-258ENST00000638029 MIFP14174 115 aa12.29□□□□□ -0.44
CACNA1A-258ENST00000638029 C10orf25Q5T742 122 aa12.28□□□□□ -0.44
CACNA1A-258ENST00000638029 IGHV6-1A0A0B4J1U7 121 aa12.28□□□□□ -0.44
CACNA1A-258ENST00000638029 CTRLP40313 264 aa12.28□□□□□ -0.44
CACNA1A-258ENST00000638029 IGFL2Q6UWQ7 119 aa12.28□□□□□ -0.44
CACNA1A-258ENST00000638029 TRBV7-6A0A0J9YX20 115 aa12.28□□□□□ -0.44
CACNA1A-258ENST00000638029 PROK1P58294 105 aa12.28□□□□□ -0.44
CACNA1A-258ENST00000638029 BBC3Q96PG8 261 aaPredicted RBP12.27□□□□□ -0.44
CACNA1A-258ENST00000638029 PSPHP1O15172 72 aa12.27□□□□□ -0.45
CACNA1A-258ENST00000638029 LYRM9A8MSI8 78 aa12.26□□□□□ -0.45
CACNA1A-258ENST00000638029 PRLHP81277 87 aa12.26□□□□□ -0.45
CACNA1A-258ENST00000638029 SYCNQ0VAF6 134 aa12.26□□□□□ -0.45
CACNA1A-258ENST00000638029 LINC00322Q6ZN03 302 aaPredicted RBP12.26□□□□□ -0.45
CACNA1A-258ENST00000638029 MYO9AB2RTY4 2548 aa12.26□□□□□ -0.45
CACNA1A-258ENST00000638029 TTC28Q96AY4 2481 aa12.26□□□□□ -0.45
CACNA1A-258ENST00000638029 PCOTHQ58A44 107 aa12.26□□□□□ -0.45
CACNA1A-258ENST00000638029 DEFB116Q30KQ4 102 aa12.25□□□□□ -0.45
CACNA1A-258ENST00000638029 LRRK2Q5S007 2527 aa12.25□□□□□ -0.45
CACNA1A-258ENST00000638029 LINC01556Q5JQF7 62 aa12.25□□□□□ -0.45
CACNA1A-258ENST00000638029 Q8N976 141 aa12.25□□□□□ -0.45
CACNA1A-258ENST00000638029 BEAN1Q3B7T3 259 aa12.24□□□□□ -0.45
CACNA1A-258ENST00000638029 C6orf99Q4VX62 202 aa12.24□□□□□ -0.45
CACNA1A-258ENST00000638029 C19orf84I3L1E1 186 aa12.24□□□□□ -0.45
CACNA1A-258ENST00000638029 LINC01548A6NM66 108 aa12.23□□□□□ -0.45
CACNA1A-258ENST00000638029 C2CD3Q4AC94 2353 aa12.23□□□□□ -0.45
CACNA1A-258ENST00000638029 A0A0J9YXY3 114 aa12.23□□□□□ -0.45
CACNA1A-258ENST00000638029 PRM2P04554 102 aa12.23□□□□□ -0.45
CACNA1A-258ENST00000638029 XGP55808 180 aa12.23□□□□□ -0.45
CACNA1A-258ENST00000638029 FAM19A3Q7Z5A8 133 aa12.22□□□□□ -0.45
CACNA1A-258ENST00000638029 TP73-AS1Q9UF72 201 aa12.22□□□□□ -0.45
CACNA1A-258ENST00000638029 SBSPONQ8IVN8 264 aa12.22□□□□□ -0.45
CACNA1A-258ENST00000638029 A8MZ25 164 aa12.22□□□□□ -0.45
CACNA1A-258ENST00000638029 TRBV6-5A0A0K0K1A5 114 aa12.21□□□□□ -0.45
CACNA1A-258ENST00000638029 FRMD6-AS1P0C7T7 363 aa12.21□□□□□ -0.45
CACNA1A-258ENST00000638029 C1orf137Q5JT78 98 aa12.21□□□□□ -0.45
CACNA1A-258ENST00000638029 Q8N7P7 452 aa12.21□□□□□ -0.45
CACNA1A-258ENST00000638029 FAM167A-AS1Q96KT0 104 aa12.21□□□□□ -0.45
CACNA1A-258ENST00000638029 PATE2Q6UY27 113 aa12.21□□□□□ -0.46
CACNA1A-258ENST00000638029 E7EUB6 86 aa12.2□□□□□ -0.46
CACNA1A-258ENST00000638029 C18orf65Q6ZTR6 163 aa12.2□□□□□ -0.46
CACNA1A-258ENST00000638029 TRIAP1O43715 76 aa12.2□□□□□ -0.46
CACNA1A-258ENST00000638029 LOC107984640A0A0U1RRK4 108 aa12.2□□□□□ -0.46
CACNA1A-258ENST00000638029 A0A0J9YX75 114 aa12.2□□□□□ -0.46
CACNA1A-258ENST00000638029 CRIP2P52943 208 aaPredicted RBP12.19□□□□□ -0.46
CACNA1A-258ENST00000638029 MRPS12O15235 138 aaKnown RBP12.19□□□□□ -0.46
CACNA1A-258ENST00000638029 BRI3O95415 125 aa12.19□□□□□ -0.46
CACNA1A-258ENST00000638029 KRTAP27-1Q3LI81 207 aa12.18□□□□□ -0.46
CACNA1A-258ENST00000638029 C10orf99Q6UWK7 81 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms