RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 M0QY20 66 aa5.32□□□□□ -1.56
PNKP-229ENST00000637897 POLR2KP53803 58 aaKnown RBP5.32□□□□□ -1.56
PNKP-229ENST00000637897 LBHQ53QV2 105 aaPredicted RBP5.32□□□□□ -1.56
PNKP-229ENST00000637897 FAM74A4Q5TZK3 123 aa5.32□□□□□ -1.56
PNKP-229ENST00000637897 TOMM6Q96B49 74 aa5.32□□□□□ -1.56
PNKP-229ENST00000637897 C14orf144Q96I85 54 aa5.32□□□□□ -1.56
PNKP-229ENST00000637897 KIR2DL4Q99706 377 aa5.32□□□□□ -1.56
PNKP-229ENST00000637897 TRBV27A0A0K0K1C4 114 aa5.31□□□□□ -1.56
PNKP-229ENST00000637897 C16orf90A8MZG2 172 aa5.31□□□□□ -1.56
PNKP-229ENST00000637897 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.31□□□□□ -1.56
PNKP-229ENST00000637897 K7EQD1 137 aa5.31□□□□□ -1.56
PNKP-229ENST00000637897 PAX4O43316 350 aa5.31□□□□□ -1.56
PNKP-229ENST00000637897 PRSS1P07477 247 aa5.31□□□□□ -1.56
PNKP-229ENST00000637897 IGLC3P0DOY3 106 aa5.31□□□□□ -1.56
PNKP-229ENST00000637897 HHLA3Q9XRX5 114 aa5.31□□□□□ -1.56
PNKP-229ENST00000637897 SDHAF1A6NFY7 115 aa5.3□□□□□ -1.56
PNKP-229ENST00000637897 A6NJY4 79 aa5.3□□□□□ -1.56
PNKP-229ENST00000637897 CDK2AP2O75956 126 aa5.3□□□□□ -1.56
PNKP-229ENST00000637897 RHOHQ15669 191 aa5.3□□□□□ -1.56
PNKP-229ENST00000637897 UFSP1Q6NVU6 142 aa5.3□□□□□ -1.56
PNKP-229ENST00000637897 ZFP2Q6ZN57 461 aa5.3□□□□□ -1.56
PNKP-229ENST00000637897 Q6ZN92 141 aa5.3□□□□□ -1.56
PNKP-229ENST00000637897 WFDC10BQ8IUB3 73 aa5.3□□□□□ -1.56
PNKP-229ENST00000637897 SCGB3A1Q96QR1 104 aa5.3□□□□□ -1.56
PNKP-229ENST00000637897 Q9UF83 564 aa5.3□□□□□ -1.56
PNKP-229ENST00000637897 PRO0255Q9UI72 69 aa5.3□□□□□ -1.56
PNKP-229ENST00000637897 CYSLTR1Q9Y271 337 aa5.3□□□□□ -1.56
PNKP-229ENST00000637897 TRAV12-1A0A0B4J245 112 aa5.29□□□□□ -1.56
PNKP-229ENST00000637897 hDV102S1A0JD36 115 aa5.29□□□□□ -1.56
PNKP-229ENST00000637897 M0R143 59 aa5.29□□□□□ -1.56
PNKP-229ENST00000637897 SIVA1O15304 175 aa5.29□□□□□ -1.56
PNKP-229ENST00000637897 RS1O15537 224 aa5.29□□□□□ -1.56
PNKP-229ENST00000637897 DNAH10OSP0CZ25 163 aa5.29□□□□□ -1.56
PNKP-229ENST00000637897 HNRNPA3P51991 378 aaKnown RBP5.29□□□□□ -1.56
PNKP-229ENST00000637897 CTAG1AP78358 180 aa5.29□□□□□ -1.56
PNKP-229ENST00000637897 ODF1Q14990 250 aa5.29□□□□□ -1.56
PNKP-229ENST00000637897 MAJINQ3KP22 176 aa5.29□□□□□ -1.56
PNKP-229ENST00000637897 CFAP126Q5VTH2 177 aa5.29□□□□□ -1.56
PNKP-229ENST00000637897 C2orf66Q6UXQ4 117 aa5.29□□□□□ -1.56
PNKP-229ENST00000637897 Q6ZSN1 163 aa5.29□□□□□ -1.56
PNKP-229ENST00000637897 ERASQ7Z444 233 aa5.29□□□□□ -1.56
PNKP-229ENST00000637897 DNAJC30Q96LL9 226 aa5.29□□□□□ -1.56
PNKP-229ENST00000637897 PMCHL2Q9BQD1 86 aa5.29□□□□□ -1.56
PNKP-229ENST00000637897 ICOSQ9Y6W8 199 aa5.29□□□□□ -1.56
PNKP-229ENST00000637897 VPS13BQ7Z7G8 4022 aa5.29□□□□□ -1.56
PNKP-229ENST00000637897 A0A087WX48 190 aa5.28□□□□□ -1.56
PNKP-229ENST00000637897 TRAV4A0A0B4J268 109 aa5.28□□□□□ -1.56
PNKP-229ENST00000637897 I3L3M4 83 aa5.28□□□□□ -1.56
PNKP-229ENST00000637897 CIDEAO60543 219 aa5.28□□□□□ -1.56
PNKP-229ENST00000637897 DPM2O94777 84 aa5.28□□□□□ -1.56
PNKP-229ENST00000637897 IGKCP01834 107 aa5.28□□□□□ -1.56
PNKP-229ENST00000637897 GYPEP15421 78 aa5.28□□□□□ -1.56
PNKP-229ENST00000637897 PLNP26678 52 aa5.28□□□□□ -1.56
PNKP-229ENST00000637897 XGP55808 180 aa5.28□□□□□ -1.56
PNKP-229ENST00000637897 SLC25A34Q6PIV7 304 aa5.28□□□□□ -1.56
PNKP-229ENST00000637897 TMEM141Q96I45 108 aa5.28□□□□□ -1.56
PNKP-229ENST00000637897 TMEM238LA0A1B0GVL6 79 aa5.27□□□□□ -1.57
PNKP-229ENST00000637897 COX8AP10176 69 aa5.27□□□□□ -1.57
PNKP-229ENST00000637897 KRTAP10-1P60331 282 aa5.27□□□□□ -1.57
PNKP-229ENST00000637897 MRPL23Q16540 153 aaKnown RBP5.27□□□□□ -1.57
PNKP-229ENST00000637897 TTC32Q5I0X7 151 aa5.27□□□□□ -1.57
PNKP-229ENST00000637897 NEGR1Q7Z3B1 354 aa5.27□□□□□ -1.57
PNKP-229ENST00000637897 Q8N3U1 123 aa5.27□□□□□ -1.57
PNKP-229ENST00000637897 OR4C5Q8NGB2 326 aa5.27□□□□□ -1.57
PNKP-229ENST00000637897 TIMM17AQ99595 171 aa5.27□□□□□ -1.57
PNKP-229ENST00000637897 C2orf88Q9BSF0 95 aa5.27□□□□□ -1.57
PNKP-229ENST00000637897 A0A087WTM6 91 aa5.26□□□□□ -1.57
PNKP-229ENST00000637897 IGHV3-73A0A0B4J1V6 119 aa5.26□□□□□ -1.57
PNKP-229ENST00000637897 TRGV4A0A0C4DH28 118 aa5.26□□□□□ -1.57
PNKP-229ENST00000637897 F8VRH5 84 aa5.26□□□□□ -1.57
PNKP-229ENST00000637897 TSHBP01222 138 aa5.26□□□□□ -1.57
PNKP-229ENST00000637897 LINC00694P0DN24 101 aa5.26□□□□□ -1.57
PNKP-229ENST00000637897 Q8N1X5 172 aa5.26□□□□□ -1.57
PNKP-229ENST00000637897 MAPKAPK5-AS1Q8N8E1 139 aa5.26□□□□□ -1.57
PNKP-229ENST00000637897 SLC25A29Q8N8R3 303 aa5.26□□□□□ -1.57
PNKP-229ENST00000637897 NEXN-AS1Q8NBZ9 246 aa5.26□□□□□ -1.57
PNKP-229ENST00000637897 SNHG12Q9BXW3 62 aa5.26□□□□□ -1.57
PNKP-229ENST00000637897 CHTOPQ9Y3Y2 248 aaKnown RBP5.26□□□□□ -1.57
PNKP-229ENST00000637897 TRBV10-1A0A0K0K1A3 114 aa5.25□□□□□ -1.57
PNKP-229ENST00000637897 LRCOL1A6NCL2 159 aa5.25□□□□□ -1.57
PNKP-229ENST00000637897 IGIPA6NJ69 53 aa5.25□□□□□ -1.57
PNKP-229ENST00000637897 DLEU1O43261 78 aa5.25□□□□□ -1.57
PNKP-229ENST00000637897 NPSP0C0P6 89 aa5.25□□□□□ -1.57
PNKP-229ENST00000637897 PAPPA-AS1Q5QFB9 102 aa5.25□□□□□ -1.57
PNKP-229ENST00000637897 C20orf203Q8NBC4 194 aa5.25□□□□□ -1.57
PNKP-229ENST00000637897 BAALCQ8WXS3 180 aa5.25□□□□□ -1.57
PNKP-229ENST00000637897 MRPL35Q9NZE8 188 aaKnown RBP5.25□□□□□ -1.57
PNKP-229ENST00000637897 MYCBP2O75592 4640 aa5.25□□□□□ -1.57
PNKP-229ENST00000637897 EREGO14944 169 aa5.24□□□□□ -1.57
PNKP-229ENST00000637897 TIRAPP58753 221 aa5.24□□□□□ -1.57
PNKP-229ENST00000637897 WFDC2Q14508 124 aa5.24□□□□□ -1.57
PNKP-229ENST00000637897 PMVKQ15126 192 aa5.24□□□□□ -1.57
PNKP-229ENST00000637897 ANKRD39Q53RE8 183 aa5.24□□□□□ -1.57
PNKP-229ENST00000637897 STPG4Q8N801 248 aa5.24□□□□□ -1.57
PNKP-229ENST00000637897 PYGO1Q9Y3Y4 419 aa5.24□□□□□ -1.57
PNKP-229ENST00000637897 TRBV7-3A0A075B6L6 115 aa5.23□□□□□ -1.57
PNKP-229ENST00000637897 RPL39P62891 51 aaKnown RBP5.23□□□□□ -1.57
PNKP-229ENST00000637897 RPL36AP83881 106 aaKnown RBP5.23□□□□□ -1.57
PNKP-229ENST00000637897 COTL1Q14019 142 aa5.23□□□□□ -1.57
PNKP-229ENST00000637897 ZC2HC1BQ5TFG8 222 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms