RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 CST9LQ9H4G1 147 aa8.13□□□□□ -1.11
CLN6-223ENST00000637823 STAB2Q8WWQ8 2551 aa8.12□□□□□ -1.11
CLN6-223ENST00000637823 PKIAP61925 76 aa8.12□□□□□ -1.11
CLN6-223ENST00000637823 OR5A1Q8NGJ0 315 aa8.12□□□□□ -1.11
CLN6-223ENST00000637823 AMELXQ99217 191 aa8.12□□□□□ -1.11
CLN6-223ENST00000637823 CHTOPQ9Y3Y2 248 aaKnown RBP8.12□□□□□ -1.11
CLN6-223ENST00000637823 A0A1B0GUV1 79 aa8.11□□□□□ -1.11
CLN6-223ENST00000637823 TEX43Q6ZNM6 134 aa8.11□□□□□ -1.11
CLN6-223ENST00000637823 ZNF664Q8N3J9 261 aa8.11□□□□□ -1.11
CLN6-223ENST00000637823 PMCHL2Q9BQD1 86 aa8.11□□□□□ -1.11
CLN6-223ENST00000637823 TRAV8-6A0A0B4J262 113 aa8.1□□□□□ -1.11
CLN6-223ENST00000637823 IGLL5B9A064 214 aa8.1□□□□□ -1.11
CLN6-223ENST00000637823 TMEM262E9PQX1 116 aa8.1□□□□□ -1.11
CLN6-223ENST00000637823 F8VRH5 84 aa8.1□□□□□ -1.11
CLN6-223ENST00000637823 DPM2O94777 84 aa8.1□□□□□ -1.11
CLN6-223ENST00000637823 S100A12P80511 92 aa8.1□□□□□ -1.11
CLN6-223ENST00000637823 ZC2HC1BQ5TFG8 222 aa8.1□□□□□ -1.11
CLN6-223ENST00000637823 CDC42SE2Q9NRR3 84 aa8.1□□□□□ -1.11
CLN6-223ENST00000637823 MRPL35Q9NZE8 188 aaKnown RBP8.1□□□□□ -1.11
CLN6-223ENST00000637823 IGKCP01834 107 aa8.09□□□□□ -1.11
CLN6-223ENST00000637823 PLNP26678 52 aa8.09□□□□□ -1.11
CLN6-223ENST00000637823 ESRGQ1W209 222 aa8.09□□□□□ -1.11
CLN6-223ENST00000637823 CDPF1Q6NVV7 123 aa8.09□□□□□ -1.11
CLN6-223ENST00000637823 Q6ZUT4 128 aa8.09□□□□□ -1.11
CLN6-223ENST00000637823 ATOH7Q8N100 152 aa8.09□□□□□ -1.11
CLN6-223ENST00000637823 C2orf88Q9BSF0 95 aa8.09□□□□□ -1.11
CLN6-223ENST00000637823 PRKDCP78527 4128 aaKnown RBP8.09□□□□□ -1.12
CLN6-223ENST00000637823 TRAV9-2A0A087WT02 112 aa8.08□□□□□ -1.12
CLN6-223ENST00000637823 RBX1P62877 108 aa8.08□□□□□ -1.12
CLN6-223ENST00000637823 VAMP8Q9BV40 100 aa8.08□□□□□ -1.12
CLN6-223ENST00000637823 IGLV4-60A0A075B6I1 120 aa8.07□□□□□ -1.12
CLN6-223ENST00000637823 RNASE13Q5GAN3 156 aaKnown RBP8.07□□□□□ -1.12
CLN6-223ENST00000637823 IGLV4-69A0A075B6H9 119 aa8.06□□□□□ -1.12
CLN6-223ENST00000637823 NUPR2A6NF83 97 aa8.06□□□□□ -1.12
CLN6-223ENST00000637823 HSBP1L1C9JCN9 74 aa8.06□□□□□ -1.12
CLN6-223ENST00000637823 IGLC3P0DOY3 106 aa8.06□□□□□ -1.12
CLN6-223ENST00000637823 MPV17L2Q567V2 206 aa8.06□□□□□ -1.12
CLN6-223ENST00000637823 NFE4Q86UQ8 179 aa8.06□□□□□ -1.12
CLN6-223ENST00000637823 KLK5Q9Y337 293 aaPredicted RBP8.06□□□□□ -1.12
CLN6-223ENST00000637823 A0A0J9YXV3 536 aa8.05□□□□□ -1.12
CLN6-223ENST00000637823 TINCRA0A1B0GVN0 87 aa8.05□□□□□ -1.12
CLN6-223ENST00000637823 UBE2D1P51668 147 aa8.05□□□□□ -1.12
CLN6-223ENST00000637823 CCL18P55774 89 aa8.05□□□□□ -1.12
CLN6-223ENST00000637823 FAM19A3Q7Z5A8 133 aa8.05□□□□□ -1.12
CLN6-223ENST00000637823 APLNQ9ULZ1 77 aa8.05□□□□□ -1.12
CLN6-223ENST00000637823 hDV102S1A0JD36 115 aa8.04□□□□□ -1.12
CLN6-223ENST00000637823 C11orf86A6NJI1 115 aa8.04□□□□□ -1.12
CLN6-223ENST00000637823 CCL25O15444 150 aa8.04□□□□□ -1.12
CLN6-223ENST00000637823 TCTAP57738 103 aa8.04□□□□□ -1.12
CLN6-223ENST00000637823 SEC11AP67812 179 aa8.04□□□□□ -1.12
CLN6-223ENST00000637823 MAJINQ3KP22 176 aa8.04□□□□□ -1.12
CLN6-223ENST00000637823 SPATA45Q537H7 98 aa8.04□□□□□ -1.12
CLN6-223ENST00000637823 MRPS16Q9Y3D3 137 aaKnown RBP8.04□□□□□ -1.12
CLN6-223ENST00000637823 PAM16Q9Y3D7 125 aa8.04□□□□□ -1.12
CLN6-223ENST00000637823 TRAV13-1A0A0B4J241 112 aa8.03□□□□□ -1.12
CLN6-223ENST00000637823 ANGP03950 147 aaKnown RBP8.03□□□□□ -1.12
CLN6-223ENST00000637823 CHAC1Q9BUX1 264 aa8.03□□□□□ -1.12
CLN6-223ENST00000637823 GEMIN7Q9H840 131 aaKnown RBP8.03□□□□□ -1.12
CLN6-223ENST00000637823 LINC00588Q9Y4M8 146 aa8.03□□□□□ -1.12
CLN6-223ENST00000637823 TMEM170BQ5T4T1 132 aa8.02□□□□□ -1.13
CLN6-223ENST00000637823 LINC00242Q5T6M2 205 aa8.02□□□□□ -1.13
CLN6-223ENST00000637823 WFDC10BQ8IUB3 73 aa8.02□□□□□ -1.13
CLN6-223ENST00000637823 LINC00269Q8N2A0 174 aa8.02□□□□□ -1.13
CLN6-223ENST00000637823 STPG4Q8N801 248 aa8.02□□□□□ -1.13
CLN6-223ENST00000637823 LINC00959A0A1B0GUT2 108 aa8.01□□□□□ -1.13
CLN6-223ENST00000637823 HERVK_113P63121 156 aa8.01□□□□□ -1.13
CLN6-223ENST00000637823 SS18Q15532 418 aa8.01□□□□□ -1.13
CLN6-223ENST00000637823 LINC01556Q5JQF7 62 aa8.01□□□□□ -1.13
CLN6-223ENST00000637823 Q8N3U1 123 aa8.01□□□□□ -1.13
CLN6-223ENST00000637823 IGLV5-45A0A087WSX0 123 aa8□□□□□ -1.13
CLN6-223ENST00000637823 IGKV3OR2-268A0A0C4DH90 116 aa8□□□□□ -1.13
CLN6-223ENST00000637823 IGHV3-30P01768 117 aa8□□□□□ -1.13
CLN6-223ENST00000637823 IGHV3-33P01772 117 aa8□□□□□ -1.13
CLN6-223ENST00000637823 IGHV3-30-3P0DP02 117 aa8□□□□□ -1.13
CLN6-223ENST00000637823 IGHV3-30-5P0DP03 117 aa8□□□□□ -1.13
CLN6-223ENST00000637823 ZNF22P17026 224 aaPredicted RBP8□□□□□ -1.13
CLN6-223ENST00000637823 HERVK_113P61574 105 aa8□□□□□ -1.13
CLN6-223ENST00000637823 COX6A2Q02221 97 aa8□□□□□ -1.13
CLN6-223ENST00000637823 REG3AQ06141 175 aa8□□□□□ -1.13
CLN6-223ENST00000637823 ANKRD39Q53RE8 183 aa8□□□□□ -1.13
CLN6-223ENST00000637823 UPK3BQ9BT76 320 aa8□□□□□ -1.13
CLN6-223ENST00000637823 KLK12Q9UKR0 248 aa8□□□□□ -1.13
CLN6-223ENST00000637823 DYNC2H1Q8NCM8 4307 aaKnown RBP7.99□□□□□ -1.13
CLN6-223ENST00000637823 TMEM223A0PJW6 202 aa7.99□□□□□ -1.13
CLN6-223ENST00000637823 H3BRM9 83 aa7.99□□□□□ -1.13
CLN6-223ENST00000637823 SIVA1O15304 175 aa7.99□□□□□ -1.13
CLN6-223ENST00000637823 DNAH10OSP0CZ25 163 aa7.99□□□□□ -1.13
CLN6-223ENST00000637823 LINC00469Q8N7U9 141 aa7.99□□□□□ -1.13
CLN6-223ENST00000637823 PRO1933Q9H354 126 aa7.99□□□□□ -1.13
CLN6-223ENST00000637823 PRR34Q9NV39 138 aa7.99□□□□□ -1.13
CLN6-223ENST00000637823 DNAH7Q8WXX0 4024 aa7.99□□□□□ -1.13
CLN6-223ENST00000637823 TSTD3H0UI37 97 aa7.98□□□□□ -1.13
CLN6-223ENST00000637823 WWC2-AS2Q96NR7 200 aa7.98□□□□□ -1.13
CLN6-223ENST00000637823 CDKN2A-AS1Q9UH64 79 aa7.98□□□□□ -1.13
CLN6-223ENST00000637823 TGP01266 2768 aa7.98□□□□□ -1.13
CLN6-223ENST00000637823 TRAV8-4A0A0B4J246 113 aa7.97□□□□□ -1.13
CLN6-223ENST00000637823 E9PLD3 99 aa7.97□□□□□ -1.13
CLN6-223ENST00000637823 CLPSL2Q6UWE3 100 aa7.97□□□□□ -1.13
CLN6-223ENST00000637823 ENHOQ6UWT2 76 aa7.97□□□□□ -1.13
CLN6-223ENST00000637823 MUC7Q8TAX7 377 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms