RNA–Protein interactions for RNA: ENST00000637432.1

CACNA1A-240, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-240ENST00000637432 CTRLP40313 264 aa12.28□□□□□ -0.44
CACNA1A-240ENST00000637432 Q6ZS49 121 aa12.27□□□□□ -0.44
CACNA1A-240ENST00000637432 BBC3Q96PG8 261 aaPredicted RBP12.27□□□□□ -0.44
CACNA1A-240ENST00000637432 ZNF747Q9BV97 191 aa12.27□□□□□ -0.45
CACNA1A-240ENST00000637432 TTTY13Q9BZ97 58 aa12.27□□□□□ -0.45
CACNA1A-240ENST00000637432 LENEPQ9Y5L5 61 aa12.27□□□□□ -0.45
CACNA1A-240ENST00000637432 LYRM9A8MSI8 78 aa12.26□□□□□ -0.45
CACNA1A-240ENST00000637432 SYCNQ0VAF6 134 aa12.26□□□□□ -0.45
CACNA1A-240ENST00000637432 LINC00322Q6ZN03 302 aaPredicted RBP12.26□□□□□ -0.45
CACNA1A-240ENST00000637432 MYO9AB2RTY4 2548 aa12.26□□□□□ -0.45
CACNA1A-240ENST00000637432 TTC28Q96AY4 2481 aa12.26□□□□□ -0.45
CACNA1A-240ENST00000637432 G3V4G9 280 aa12.26□□□□□ -0.45
CACNA1A-240ENST00000637432 THSD7BQ9C0I4 1608 aa12.26□□□□□ -0.45
CACNA1A-240ENST00000637432 LRRK2Q5S007 2527 aa12.25□□□□□ -0.45
CACNA1A-240ENST00000637432 LINC01556Q5JQF7 62 aa12.25□□□□□ -0.45
CACNA1A-240ENST00000637432 Q8N976 141 aa12.25□□□□□ -0.45
CACNA1A-240ENST00000637432 V9GYY9 64 aa12.25□□□□□ -0.45
CACNA1A-240ENST00000637432 C11orf86A6NJI1 115 aa12.25□□□□□ -0.45
CACNA1A-240ENST00000637432 IGHV6-1A0A0B4J1U7 121 aa12.24□□□□□ -0.45
CACNA1A-240ENST00000637432 C19orf84I3L1E1 186 aa12.24□□□□□ -0.45
CACNA1A-240ENST00000637432 PROK1P58294 105 aa12.24□□□□□ -0.45
CACNA1A-240ENST00000637432 TMEM223A0PJW6 202 aa12.23□□□□□ -0.45
CACNA1A-240ENST00000637432 LINC01548A6NM66 108 aa12.23□□□□□ -0.45
CACNA1A-240ENST00000637432 C2CD3Q4AC94 2353 aa12.23□□□□□ -0.45
CACNA1A-240ENST00000637432 PTH2Q96A98 100 aa12.23□□□□□ -0.45
CACNA1A-240ENST00000637432 PRM2P04554 102 aa12.23□□□□□ -0.45
CACNA1A-240ENST00000637432 XGP55808 180 aa12.23□□□□□ -0.45
CACNA1A-240ENST00000637432 FXYD2P54710 66 aa12.22□□□□□ -0.45
CACNA1A-240ENST00000637432 TIMM17BO60830 172 aa12.22□□□□□ -0.45
CACNA1A-240ENST00000637432 CPAMD8Q8IZJ3 1885 aa12.22□□□□□ -0.45
CACNA1A-240ENST00000637432 C10orf91Q5T1B1 145 aa12.21□□□□□ -0.45
CACNA1A-240ENST00000637432 C1orf137Q5JT78 98 aa12.21□□□□□ -0.45
CACNA1A-240ENST00000637432 MIFP14174 115 aa12.2□□□□□ -0.46
CACNA1A-240ENST00000637432 C18orf65Q6ZTR6 163 aa12.2□□□□□ -0.46
CACNA1A-240ENST00000637432 LOC107984640A0A0U1RRK4 108 aa12.2□□□□□ -0.46
CACNA1A-240ENST00000637432 PRLHP81277 87 aa12.2□□□□□ -0.46
CACNA1A-240ENST00000637432 A0A0J9YX75 114 aa12.19□□□□□ -0.46
CACNA1A-240ENST00000637432 FAM240AA0A1B0GVK7 77 aa12.19□□□□□ -0.46
CACNA1A-240ENST00000637432 Q8N7P7 452 aa12.19□□□□□ -0.46
CACNA1A-240ENST00000637432 BRI3O95415 125 aa12.19□□□□□ -0.46
CACNA1A-240ENST00000637432 PDE6GP18545 87 aa12.18□□□□□ -0.46
CACNA1A-240ENST00000637432 MIAQ16674 131 aa12.18□□□□□ -0.46
CACNA1A-240ENST00000637432 FOXL2NBQ6ZUU3 175 aa12.18□□□□□ -0.46
CACNA1A-240ENST00000637432 NDUFC2-KCTD14E9PQ53 114 aa12.18□□□□□ -0.46
CACNA1A-240ENST00000637432 C10orf99Q6UWK7 81 aa12.18□□□□□ -0.46
CACNA1A-240ENST00000637432 SBSPONQ8IVN8 264 aa12.18□□□□□ -0.46
CACNA1A-240ENST00000637432 E7EUB6 86 aa12.18□□□□□ -0.46
CACNA1A-240ENST00000637432 TRBV7-6A0A0J9YX20 115 aa12.18□□□□□ -0.46
CACNA1A-240ENST00000637432 K7EMT4 169 aa12.18□□□□□ -0.46
CACNA1A-240ENST00000637432 Q6YL49 198 aa12.18□□□□□ -0.46
CACNA1A-240ENST00000637432 DEFB114Q30KQ6 69 aa12.17□□□□□ -0.46
CACNA1A-240ENST00000637432 PRORYQ9H606 182 aa12.17□□□□□ -0.46
CACNA1A-240ENST00000637432 NOTCH2Q04721 2471 aa12.17□□□□□ -0.46
CACNA1A-240ENST00000637432 M0QXV9 152 aa12.17□□□□□ -0.46
CACNA1A-240ENST00000637432 DEFB116Q30KQ4 102 aa12.17□□□□□ -0.46
CACNA1A-240ENST00000637432 C6orf99Q4VX62 202 aa12.17□□□□□ -0.46
CACNA1A-240ENST00000637432 GDF5OSQ5U4N7 250 aa12.17□□□□□ -0.46
CACNA1A-240ENST00000637432 TRBV6-8A0A0A6YYG3 113 aa12.16□□□□□ -0.46
CACNA1A-240ENST00000637432 SMIM9A6NGZ8 99 aa12.16□□□□□ -0.46
CACNA1A-240ENST00000637432 SPANXB1Q9NS25 103 aaPredicted RBP12.16□□□□□ -0.46
CACNA1A-240ENST00000637432 C11orf53Q8IXP5 236 aa12.16□□□□□ -0.46
CACNA1A-240ENST00000637432 CELA1Q9UNI1 258 aa12.16□□□□□ -0.46
CACNA1A-240ENST00000637432 LINC00474Q9P2X8 69 aa12.16□□□□□ -0.46
CACNA1A-240ENST00000637432 MYO18BQ8IUG5 2567 aa12.16□□□□□ -0.46
CACNA1A-240ENST00000637432 E9PLD3 99 aa12.14□□□□□ -0.47
CACNA1A-240ENST00000637432 TRBV27A0A0K0K1C4 114 aa12.14□□□□□ -0.47
CACNA1A-240ENST00000637432 ZFYVE26Q68DK2 2539 aa12.14□□□□□ -0.47
CACNA1A-240ENST00000637432 IGLC6P0CF74 106 aa12.14□□□□□ -0.47
CACNA1A-240ENST00000637432 TRBV6-5A0A0K0K1A5 114 aa12.13□□□□□ -0.47
CACNA1A-240ENST00000637432 RPL28P46779 137 aaKnown RBP12.13□□□□□ -0.47
CACNA1A-240ENST00000637432 Q6ZSR3 168 aa12.13□□□□□ -0.47
CACNA1A-240ENST00000637432 PCOTHQ58A44 107 aa12.13□□□□□ -0.47
CACNA1A-240ENST00000637432 ZNF524Q96C55 264 aa12.13□□□□□ -0.47
CACNA1A-240ENST00000637432 IGLV4-69A0A075B6H9 119 aa12.12□□□□□ -0.47
CACNA1A-240ENST00000637432 NEXN-AS1Q8NBZ9 246 aa12.12□□□□□ -0.47
CACNA1A-240ENST00000637432 TDRG1Q3Y452 100 aa12.11□□□□□ -0.47
CACNA1A-240ENST00000637432 CDKN2A-AS1Q9UH64 79 aa12.1□□□□□ -0.47
CACNA1A-240ENST00000637432 A0A0J9YXY3 114 aa12.1□□□□□ -0.47
CACNA1A-240ENST00000637432 UQCRQO14949 82 aa12.1□□□□□ -0.47
CACNA1A-240ENST00000637432 C20orf173Q96LM9 149 aa12.1□□□□□ -0.47
CACNA1A-240ENST00000637432 C1orf134Q5TEV5 83 aa12.1□□□□□ -0.47
CACNA1A-240ENST00000637432 ACANP16112 2415 aa12.1□□□□□ -0.47
CACNA1A-240ENST00000637432 Q6ZSV7 163 aa12.1□□□□□ -0.47
CACNA1A-240ENST00000637432 LINC00643Q86TS7 51 aa12.09□□□□□ -0.47
CACNA1A-240ENST00000637432 H3BT86 120 aa12.09□□□□□ -0.47
CACNA1A-240ENST00000637432 IGKV2D-30A0A075B6S6 120 aa12.09□□□□□ -0.47
CACNA1A-240ENST00000637432 A8MZ25 164 aa12.09□□□□□ -0.47
CACNA1A-240ENST00000637432 IGKV2-30P06310 120 aa12.09□□□□□ -0.47
CACNA1A-240ENST00000637432 CFAP126Q5VTH2 177 aa12.08□□□□□ -0.48
CACNA1A-240ENST00000637432 RSPO1Q2MKA7 263 aaPredicted RBP12.08□□□□□ -0.48
CACNA1A-240ENST00000637432 U3KQK5 164 aa12.08□□□□□ -0.48
CACNA1A-240ENST00000637432 DHRS4-AS1Q9P1J3 65 aa12.07□□□□□ -0.48
CACNA1A-240ENST00000637432 C6orf223Q8N319 242 aa12.07□□□□□ -0.48
CACNA1A-240ENST00000637432 HIGD1BQ9P298 99 aa12.07□□□□□ -0.48
CACNA1A-240ENST00000637432 C7orf65Q6ZTY9 151 aa12.07□□□□□ -0.48
CACNA1A-240ENST00000637432 J3QL48 77 aa12.07□□□□□ -0.48
CACNA1A-240ENST00000637432 ATP5EP56381 51 aaPredicted RBP12.06□□□□□ -0.48
CACNA1A-240ENST00000637432 C19orf71A6NCJ1 209 aa12.06□□□□□ -0.48
CACNA1A-240ENST00000637432 RNASE8Q8TDE3 154 aaKnown RBP12.06□□□□□ -0.48
CACNA1A-240ENST00000637432 CDPF1Q6NVV7 123 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms