RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 SH3BGRL3Q9H299 93 aa0.41□□□□□ -2.34
SMARCB1-209ENST00000635578 NAA60Q9H7X0 242 aa0.41□□□□□ -2.34
SMARCB1-209ENST00000635578 ENY2Q9NPA8 101 aa0.41□□□□□ -2.34
SMARCB1-209ENST00000635578 RPRMQ9NS64 109 aa0.41□□□□□ -2.34
SMARCB1-209ENST00000635578 OR5AC2Q9NZP5 309 aa0.41□□□□□ -2.34
SMARCB1-209ENST00000635578 RBM12B-AS1Q9P1G2 102 aa0.41□□□□□ -2.34
SMARCB1-209ENST00000635578 COPZ2Q9P299 210 aa0.41□□□□□ -2.34
SMARCB1-209ENST00000635578 RABL2AQ9UBK7 228 aaPredicted RBP0.41□□□□□ -2.34
SMARCB1-209ENST00000635578 PRNDQ9UKY0 176 aa0.41□□□□□ -2.34
SMARCB1-209ENST00000635578 ANAPC10Q9UM13 185 aa0.41□□□□□ -2.34
SMARCB1-209ENST00000635578 SSR3Q9UNL2 185 aa0.41□□□□□ -2.34
SMARCB1-209ENST00000635578 HIGD1AQ9Y241 93 aa0.41□□□□□ -2.34
SMARCB1-209ENST00000635578 ERGIC3Q9Y282 383 aa0.41□□□□□ -2.34
SMARCB1-209ENST00000635578 PHLDA3Q9Y5J5 127 aa0.41□□□□□ -2.34
SMARCB1-209ENST00000635578 FLGP20930 4061 aaPredicted RBP0.41□□□□□ -2.34
SMARCB1-209ENST00000635578 TRAV2A0A0B4J234 112 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 TRAV26-2A0A0B4J265 109 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 A0A1B0GU33 70 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 TRDV1A0A1B0GX56 115 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 A0A1W2PPV4 95 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 C19orf71A6NCJ1 209 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 PGPA6NDG6 321 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 C9orf92A6NGG3 77 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 CRYM-AS1A6NIL9 109 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 FAM25EA8MYX2 175 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 K7EN84 100 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 GSTZ1O43708 216 aaPredicted RBP0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 GATCO43716 136 aaKnown RBP0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 SLC25A20O43772 301 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 ARL6IP5O75915 188 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 IL5P05113 134 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 GPX1P07203 203 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 UBBP0CG47 229 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 RD3LP0DJH9 198 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 SULT1A3P0DMM9 295 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 SULT1A4P0DMN0 295 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 RNASE3P12724 160 aaKnown RBP0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 NPPCP23582 126 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 SNCAP37840 140 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 HINT1P49773 126 aaPredicted RBP0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 TCTAP57738 103 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 GABARAPL2P60520 117 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 HSPE1P61604 102 aaKnown RBP0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 SNRPD3P62318 126 aaKnown RBP0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 HBG1P69891 147 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 HBG2P69892 147 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 MT1HP80294 61 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 ERHP84090 104 aaKnown RBP0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 COX6A2Q02221 97 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 TMED1Q13445 227 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 CIRBPQ14011 172 aaKnown RBP0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 SMCO1Q147U7 214 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 RHOHQ15669 191 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 PSG3Q16557 428 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 KLK9Q2XQG4 91 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 KRTAP19-2Q3LHN2 52 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 CCDC58Q4VC31 144 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 LINC01556Q5JQF7 62 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 C1orf137Q5JT78 98 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 C10orf91Q5T1B1 145 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 CFAP126Q5VTH2 177 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 KRTAP26-1Q6PEX3 210 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 ENHOQ6UWT2 76 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 LCN15Q6UWW0 184 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 Q6ZRU5 148 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 Q6ZS49 121 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 LINC00305Q7Z4B0 112 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 NIT1Q86X76 327 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 DAND5Q8N907 189 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 OR10AG1Q8NH19 301 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 LRRC20Q8TCA0 184 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 ZNF431Q8TF32 576 aaPredicted RBP0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 RPL39LQ96EH5 51 aaKnown RBP0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 ZC2HC1AQ96GY0 325 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 FAM167A-AS1Q96KT0 104 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 TRGV9Q99603 122 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 SLC50A1Q9BRV3 221 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 DERL1Q9BUN8 251 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 AGPAT4-IT1Q9H0P7 198 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 TMEM222Q9H0R3 208 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 NCOR1P1Q9H4R4 102 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 C11orf1Q9H5F2 150 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 NPVFQ9HCQ7 196 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 TMEM242Q9NWH2 141 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 PSORS1C2Q9UIG4 136 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 SCP2D1Q9UJQ7 156 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 PXMP4Q9Y6I8 212 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 V9GYH0 126 aa0.4□□□□□ -2.35
SMARCB1-209ENST00000635578 IGHV3-64A0A075B6Q5 118 aa0.39□□□□□ -2.35
SMARCB1-209ENST00000635578 TRAV4A0A0B4J268 109 aa0.39□□□□□ -2.35
SMARCB1-209ENST00000635578 A0A0G2JQZ4 141 aa0.39□□□□□ -2.35
SMARCB1-209ENST00000635578 RAB19A4D1S5 217 aa0.39□□□□□ -2.35
SMARCB1-209ENST00000635578 TMEM189A5PLL7 270 aa0.39□□□□□ -2.35
SMARCB1-209ENST00000635578 CCDC160A6NGH7 325 aa0.39□□□□□ -2.35
SMARCB1-209ENST00000635578 IBA57-AS1B1ANH7 110 aa0.39□□□□□ -2.35
SMARCB1-209ENST00000635578 B4DEV8 164 aa0.39□□□□□ -2.35
SMARCB1-209ENST00000635578 GABARAPH6UMI1 98 aa0.39□□□□□ -2.35
SMARCB1-209ENST00000635578 H7BYZ3 331 aa0.39□□□□□ -2.35
SMARCB1-209ENST00000635578 J3QQQ9 107 aa0.39□□□□□ -2.35
SMARCB1-209ENST00000635578 PDCD5O14737 125 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms