RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 CCL19Q99731 98 aa0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 DPH3P1Q9H4G8 78 aa0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 EPRSP07814 1512 aaKnown RBP0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 ZMYM4Q5VZL5 1548 aa0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 NCOR2Q9Y618 2525 aa0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 PDCD11Q14690 1871 aaKnown RBP0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 C2CD3Q4AC94 2353 aa0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 CSMD3Q7Z407 3707 aa0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 GCN1Q92616 2671 aaKnown RBP0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 SPG11Q96JI7 2443 aa0.4□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 TENM4Q6N022 2769 aa0.4□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 MUC2Q02817 5179 aa0.4□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 LRRK2Q5S007 2527 aa0.4□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 BDP1A6H8Y1 2624 aa0.4□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 NSD1Q96L73 2696 aaPredicted RBP0.4□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.4□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 TRAV13-2A0A0B4J235 113 aa0.4□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 RBAKDNA6NC62 111 aa0.4□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 HCG22E2RYF7 251 aa0.4□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 H3BQ15 152 aa0.4□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 DNAL4O96015 105 aa0.4□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 IFNA17P01571 189 aa0.4□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 CCL18P55774 89 aa0.4□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 UBE2D3P61077 147 aa0.4□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 RPL37P61927 97 aaKnown RBP0.4□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 UBE2D2P62837 147 aa0.4□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 ZNF56Q15929 161 aa0.4□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 Q6ZQY7 126 aa0.4□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 C8orf59Q8N0T1 100 aaPredicted RBP0.4□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 Q8N6K4 173 aa0.4□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 SNHG12Q9BXW3 62 aa0.4□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 CYP4F30PQ9H0H9 118 aa0.4□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 SNURFQ9Y675 71 aa0.4□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 FAM208BQ5VWN6 2430 aa0.4□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 UNC13BO14795 1591 aa0.4□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 CADP27708 2225 aa0.4□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 NBEAL2Q6ZNJ1 2754 aa0.4□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 SCN11AQ9UI33 1791 aa0.4□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 FLNAP21333 2647 aaKnown RBP0.39□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 PDZD2O15018 2839 aa0.39□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 UBE2L5PA0A1B0GUS4 154 aa0.39□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 TCRBV3S1A0A5B6 114 aa0.39□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 KALRNO60229 2985 aa0.39□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 CAV3P56539 151 aa0.39□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 UBE2L3P68036 154 aaKnown RBP0.39□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 Q0VG73 95 aa0.39□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 UNQ5815/PRO19632Q6UWF5 114 aa0.39□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 Q86TA4 180 aa0.39□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 FAM167A-AS1Q96KT0 104 aa0.39□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 AQP10Q96PS8 301 aa0.39□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 WFDC6Q9BQY6 131 aa0.39□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 CDC42SE2Q9NRR3 84 aa0.39□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 NDUFA4L2Q9NRX3 87 aa0.39□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 ANKRD36BQ8N2N9 1353 aa0.39□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 LTN1O94822 1766 aa0.39□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 CACNA1HO95180 2353 aa0.39□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 ACACBO00763 2458 aa0.39□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 HUWE1Q7Z6Z7 4374 aaKnown RBP0.38□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 KCPQ6ZWJ8 1503 aa0.38□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 KIF14Q15058 1648 aa0.38□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 XRN1Q8IZH2 1706 aaKnown RBP0.38□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 CRYBG1Q9Y4K1 1723 aa0.38□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 BPTFQ12830 3046 aa0.38□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 A0A0C4DFX4 3053 aa0.38□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 SPTBN4Q9H254 2564 aa0.38□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 TTC28Q96AY4 2481 aa0.38□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 PPRC1Q5VV67 1664 aaKnown RBP0.38□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 IQSEC2Q5JU85 1478 aa0.38□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 MAGI2Q86UL8 1455 aa0.38□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 NRXN1Q9ULB1 1477 aa0.38□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 FAT2Q9NYQ8 4349 aa0.38□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 TRAV23DV6A0A075B6W5 121 aa0.38□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 TMEM218A2RU14 115 aa0.38□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 C10orf142B7Z368 130 aa0.38□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 SSSCA1O60232 199 aa0.38□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 SNAPC5O75971 98 aa0.38□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 MT-ATP8P03928 68 aa0.38□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 SPINK8P0C7L1 97 aa0.38□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 IFITM1P13164 125 aa0.38□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 RBM3P98179 157 aaKnown RBP0.38□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 SSBP1Q04837 148 aaKnown RBP0.38□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 S100A7L2Q5SY68 101 aa0.38□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 NCMAPQ5T1S8 102 aa0.38□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 CYP2G1PQ6ZSU1 146 aa0.38□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 C20orf197Q8N268 126 aa0.38□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 FAM213BQ8TBF2 198 aa0.38□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 COX7B2Q8TF08 81 aa0.38□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 TMEM14BQ9NUH8 114 aa0.38□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 LENEPQ9Y5L5 61 aa0.38□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 HIVEP3Q5T1R4 2406 aa0.38□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 MYH4Q9Y623 1939 aa0.38□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 IGSF10Q6WRI0 2623 aa0.37□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 WDFY4Q6ZS81 3184 aa0.37□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 C5P01031 1676 aa0.37□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 ARHGAP35Q9NRY4 1499 aa0.37□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 MLH3Q9UHC1 1453 aa0.37□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 GVQW2A0A096LPI5 108 aaPredicted RBP0.37□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 TRBV30A0A0K0K1B3 111 aa0.37□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 G3V318 75 aa0.37□□□□□ -2.35
NPHP3-ACAD11-202ENST00000632629 NCR3O14931 201 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms