RNA–Protein interactions for RNA: ENST00000632421.1

PHACTR4-206, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 2

Gene PHACTR4, Length 3,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-206ENST00000632421 C1QTNF4Q9BXJ3 329 aa8.79□□□□□ -1
PHACTR4-206ENST00000632421 UBE2D4Q9Y2X8 147 aa8.79□□□□□ -1
PHACTR4-206ENST00000632421 JMJD1CQ15652 2540 aa8.79□□□□□ -1
PHACTR4-206ENST00000632421 GCN1Q92616 2671 aaKnown RBP8.79□□□□□ -1
PHACTR4-206ENST00000632421 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.79□□□□□ -1
PHACTR4-206ENST00000632421 A0A0J9YY99 117 aa8.79□□□□□ -1
PHACTR4-206ENST00000632421 IGKV2-29A2NJV5 120 aaPredicted RBP8.79□□□□□ -1
PHACTR4-206ENST00000632421 LEPROTO15243 131 aa8.79□□□□□ -1
PHACTR4-206ENST00000632421 SETXQ7Z333 2677 aaKnown RBP8.79□□□□□ -1
PHACTR4-206ENST00000632421 TRAV4A0A0B4J268 109 aa8.78□□□□□ -1
PHACTR4-206ENST00000632421 KRTAP10-3P60369 221 aa8.78□□□□□ -1
PHACTR4-206ENST00000632421 ANAPC13Q9BS18 74 aa8.78□□□□□ -1
PHACTR4-206ENST00000632421 NOP10Q9NPE3 64 aaKnown RBP8.78□□□□□ -1
PHACTR4-206ENST00000632421 HECTD1Q9ULT8 2610 aa8.78□□□□□ -1
PHACTR4-206ENST00000632421 A6NJY4 79 aa8.78□□□□□ -1
PHACTR4-206ENST00000632421 PF4P02776 101 aa8.78□□□□□ -1
PHACTR4-206ENST00000632421 MRPS36P82909 103 aaKnown RBP8.78□□□□□ -1
PHACTR4-206ENST00000632421 DAZ2Q13117 558 aaKnown RBP8.78□□□□□ -1
PHACTR4-206ENST00000632421 RNASE13Q5GAN3 156 aaKnown RBP8.78□□□□□ -1
PHACTR4-206ENST00000632421 C16orf74Q96GX8 76 aa8.78□□□□□ -1
PHACTR4-206ENST00000632421 CARD19Q96LW7 228 aa8.78□□□□□ -1
PHACTR4-206ENST00000632421 NOTCH3Q9UM47 2321 aa8.77□□□□□ -1
PHACTR4-206ENST00000632421 TRBV20-1A0A075B6N2 111 aa8.77□□□□□ -1.01
PHACTR4-206ENST00000632421 K7EQD1 137 aa8.77□□□□□ -1.01
PHACTR4-206ENST00000632421 IGHV3-64A0A075B6Q5 118 aa8.76□□□□□ -1.01
PHACTR4-206ENST00000632421 TRBV10-1A0A0K0K1A3 114 aa8.76□□□□□ -1.01
PHACTR4-206ENST00000632421 RPL36AP83881 106 aaKnown RBP8.76□□□□□ -1.01
PHACTR4-206ENST00000632421 RPL36ALQ969Q0 106 aaKnown RBP8.76□□□□□ -1.01
PHACTR4-206ENST00000632421 NIPBLQ6KC79 2804 aaeCLIP8.76□□□□□ -1.01
PHACTR4-206ENST00000632421 SLC25A29Q8N8R3 303 aa8.76□□□□□ -1.01
PHACTR4-206ENST00000632421 PLAC8L1A1L4L8 177 aa8.75□□□□□ -1.01
PHACTR4-206ENST00000632421 CSNK1G2-AS1Q8NCQ2 148 aa8.75□□□□□ -1.01
PHACTR4-206ENST00000632421 H7C2G1 150 aa8.75□□□□□ -1.01
PHACTR4-206ENST00000632421 TSPAN13O95857 204 aa8.75□□□□□ -1.01
PHACTR4-206ENST00000632421 LINC00482Q8N8I6 264 aa8.75□□□□□ -1.01
PHACTR4-206ENST00000632421 TINCRA0A1B0GVN0 87 aa8.75□□□□□ -1.01
PHACTR4-206ENST00000632421 NOTCH2Q04721 2471 aa8.74□□□□□ -1.01
PHACTR4-206ENST00000632421 TIMM21Q9BVV7 248 aa8.74□□□□□ -1.01
PHACTR4-206ENST00000632421 ERG28Q9UKR5 140 aa8.74□□□□□ -1.01
PHACTR4-206ENST00000632421 DAZ4Q86SG3 579 aaKnown RBP8.74□□□□□ -1.01
PHACTR4-206ENST00000632421 DAZ3Q9NR90 486 aaKnown RBP8.74□□□□□ -1.01
PHACTR4-206ENST00000632421 TRGV2A0A075B6R0 118 aa8.73□□□□□ -1.01
PHACTR4-206ENST00000632421 INAFM1C9JVW0 142 aa8.73□□□□□ -1.01
PHACTR4-206ENST00000632421 UBE2D1P51668 147 aa8.73□□□□□ -1.01
PHACTR4-206ENST00000632421 DGAT2L7PQ6IED9 249 aa8.73□□□□□ -1.01
PHACTR4-206ENST00000632421 C3orf56Q8N813 242 aa8.73□□□□□ -1.01
PHACTR4-206ENST00000632421 GAGE7O76087 117 aa8.73□□□□□ -1.01
PHACTR4-206ENST00000632421 TCL1BO95988 128 aa8.73□□□□□ -1.01
PHACTR4-206ENST00000632421 IGHV3-30P01768 117 aa8.73□□□□□ -1.01
PHACTR4-206ENST00000632421 GAGE12FP0CL80 117 aa8.73□□□□□ -1.01
PHACTR4-206ENST00000632421 GAGE12GP0CL81 117 aa8.73□□□□□ -1.01
PHACTR4-206ENST00000632421 GAGE12IP0CL82 117 aa8.73□□□□□ -1.01
PHACTR4-206ENST00000632421 IGHV3-30-3P0DP02 117 aa8.73□□□□□ -1.01
PHACTR4-206ENST00000632421 IGHV3-30-5P0DP03 117 aa8.73□□□□□ -1.01
PHACTR4-206ENST00000632421 SHISA2Q6UWI4 295 aa8.73□□□□□ -1.01
PHACTR4-206ENST00000632421 OVOL2Q9BRP0 275 aa8.73□□□□□ -1.01
PHACTR4-206ENST00000632421 UBE2D3P61077 147 aa8.72□□□□□ -1.01
PHACTR4-206ENST00000632421 UBE2D2P62837 147 aa8.72□□□□□ -1.01
PHACTR4-206ENST00000632421 ANKRD29Q8N6D5 301 aa8.72□□□□□ -1.01
PHACTR4-206ENST00000632421 GAGE12JA6NER3 117 aa8.72□□□□□ -1.01
PHACTR4-206ENST00000632421 GAGE4Q13068 117 aa8.72□□□□□ -1.01
PHACTR4-206ENST00000632421 GAGE5Q13069 117 aa8.72□□□□□ -1.01
PHACTR4-206ENST00000632421 SCGB1C2P0DMR2 95 aa8.72□□□□□ -1.01
PHACTR4-206ENST00000632421 TRAV8-3A0A0A6YYJ7 113 aa8.71□□□□□ -1.01
PHACTR4-206ENST00000632421 IGHV1-58A0A0C4DH39 117 aa8.71□□□□□ -1.01
PHACTR4-206ENST00000632421 CCDC179H3BU77 68 aa8.7□□□□□ -1.02
PHACTR4-206ENST00000632421 CRLF1O75462 422 aa8.7□□□□□ -1.02
PHACTR4-206ENST00000632421 NTM-AS1Q6ZSK4 140 aa8.7□□□□□ -1.02
PHACTR4-206ENST00000632421 C10orf126Q8N4M7 172 aa8.7□□□□□ -1.02
PHACTR4-206ENST00000632421 LINC00694P0DN24 101 aa8.7□□□□□ -1.02
PHACTR4-206ENST00000632421 SMIM20Q8N5G0 67 aa8.7□□□□□ -1.02
PHACTR4-206ENST00000632421 VSIG2Q96IQ7 327 aa8.7□□□□□ -1.02
PHACTR4-206ENST00000632421 OTOGQ6ZRI0 2925 aa8.69□□□□□ -1.02
PHACTR4-206ENST00000632421 A0A0J9YXY3 114 aa8.69□□□□□ -1.02
PHACTR4-206ENST00000632421 TRBV6-4A0A1B0GX49 114 aa8.69□□□□□ -1.02
PHACTR4-206ENST00000632421 TIRAPP58753 221 aa8.69□□□□□ -1.02
PHACTR4-206ENST00000632421 PPDPFLQ8WWR9 84 aa8.69□□□□□ -1.02
PHACTR4-206ENST00000632421 C2CD3Q4AC94 2353 aa8.69□□□□□ -1.02
PHACTR4-206ENST00000632421 TRGV4A0A0C4DH28 118 aa8.69□□□□□ -1.02
PHACTR4-206ENST00000632421 HERV-K104P63124 156 aa8.69□□□□□ -1.02
PHACTR4-206ENST00000632421 ZFAND6Q6FIF0 208 aa8.69□□□□□ -1.02
PHACTR4-206ENST00000632421 CSDC2Q9Y534 153 aaKnown RBP8.69□□□□□ -1.02
PHACTR4-206ENST00000632421 NHLRC4P0CG21 123 aaPredicted RBP8.69□□□□□ -1.02
PHACTR4-206ENST00000632421 TEN1Q86WV5 123 aa8.69□□□□□ -1.02
PHACTR4-206ENST00000632421 FN1P02751 2386 aaKnown RBP8.68□□□□□ -1.02
PHACTR4-206ENST00000632421 CFC1BP0CG36 223 aa8.68□□□□□ -1.02
PHACTR4-206ENST00000632421 CFC1P0CG37 223 aa8.68□□□□□ -1.02
PHACTR4-206ENST00000632421 SBSPONQ8IVN8 264 aa8.68□□□□□ -1.02
PHACTR4-206ENST00000632421 NDUFA12Q9UI09 145 aa8.68□□□□□ -1.02
PHACTR4-206ENST00000632421 IGLV5-45A0A087WSX0 123 aa8.68□□□□□ -1.02
PHACTR4-206ENST00000632421 GAGE6Q13070 117 aa8.67□□□□□ -1.02
PHACTR4-206ENST00000632421 CDKN2A-AS1Q9UH64 79 aa8.67□□□□□ -1.02
PHACTR4-206ENST00000632421 LOC100131303A0A0U1RQF7 123 aa8.67□□□□□ -1.02
PHACTR4-206ENST00000632421 C9JAW5 83 aa8.67□□□□□ -1.02
PHACTR4-206ENST00000632421 C9orf66Q5T8R8 295 aa8.67□□□□□ -1.02
PHACTR4-206ENST00000632421 TMEM243Q9BU79 118 aa8.67□□□□□ -1.02
PHACTR4-206ENST00000632421 NSD1Q96L73 2696 aaPredicted RBP8.67□□□□□ -1.02
PHACTR4-206ENST00000632421 UBE2L6O14933 153 aa8.66□□□□□ -1.02
PHACTR4-206ENST00000632421 HERVK_113P63121 156 aa8.66□□□□□ -1.02
PHACTR4-206ENST00000632421 MUSTN1Q8IVN3 82 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 169.3 ms