RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 HCG22E2RYF7 251 aa-1.01□□□□□ -2.57
SRP54-214ENST00000630962 SYS1-DBNDD2H3BUS1 97 aa-1.01□□□□□ -2.57
SRP54-214ENST00000630962 SIX6O95475 246 aa-1.01□□□□□ -2.57
SRP54-214ENST00000630962 MORN2Q502X0 79 aa-1.01□□□□□ -2.57
SRP54-214ENST00000630962 TAC4Q86UU9 113 aa-1.01□□□□□ -2.57
SRP54-214ENST00000630962 BAGE2Q86Y30 109 aa-1.01□□□□□ -2.57
SRP54-214ENST00000630962 TTC9CQ8N5M4 171 aa-1.01□□□□□ -2.57
SRP54-214ENST00000630962 AIF1LQ9BQI0 150 aa-1.01□□□□□ -2.57
SRP54-214ENST00000630962 SMIM3Q9BZL3 60 aa-1.01□□□□□ -2.57
SRP54-214ENST00000630962 LINC00472Q9H8W2 130 aa-1.01□□□□□ -2.57
SRP54-214ENST00000630962 LENEPQ9Y5L5 61 aa-1.01□□□□□ -2.57
SRP54-214ENST00000630962 POLA1P09884 1462 aaPredicted RBP-1.01□□□□□ -2.57
SRP54-214ENST00000630962 GAPVD1Q14C86 1478 aa-1.01□□□□□ -2.57
SRP54-214ENST00000630962 SBF2Q86WG5 1849 aa-1.01□□□□□ -2.57
SRP54-214ENST00000630962 DOCK1Q14185 1865 aa-1.01□□□□□ -2.57
SRP54-214ENST00000630962 PI4KAP42356 2102 aa-1.01□□□□□ -2.57
SRP54-214ENST00000630962 OVOS2A0A0J9YW53 1432 aa-1.02□□□□□ -2.57
SRP54-214ENST00000630962 DISP2A7MBM2 1401 aa-1.02□□□□□ -2.57
SRP54-214ENST00000630962 J3QR89 54 aa-1.02□□□□□ -2.57
SRP54-214ENST00000630962 ADGRB1O14514 1584 aa-1.02□□□□□ -2.57
SRP54-214ENST00000630962 APOC3P02656 99 aa-1.02□□□□□ -2.57
SRP54-214ENST00000630962 LINC00694P0DN24 101 aa-1.02□□□□□ -2.57
SRP54-214ENST00000630962 NEFHP12036 1026 aa-1.02□□□□□ -2.57
SRP54-214ENST00000630962 OVOS2Q6IE36 1432 aa-1.02□□□□□ -2.57
SRP54-214ENST00000630962 KIF21AQ7Z4S6 1674 aa-1.02□□□□□ -2.57
SRP54-214ENST00000630962 AMELXQ99217 191 aa-1.02□□□□□ -2.57
SRP54-214ENST00000630962 NEBP20929 6669 aa-1.02□□□□□ -2.57
SRP54-214ENST00000630962 SPTBN4Q9H254 2564 aa-1.02□□□□□ -2.57
SRP54-214ENST00000630962 ARHGEF12Q9NZN5 1544 aa-1.03□□□□□ -2.57
SRP54-214ENST00000630962 IFT140Q96RY7 1462 aa-1.03□□□□□ -2.57
SRP54-214ENST00000630962 F8VRH5 84 aa-1.03□□□□□ -2.57
SRP54-214ENST00000630962 K7ERU9 68 aa-1.03□□□□□ -2.57
SRP54-214ENST00000630962 UQCR11O14957 56 aa-1.03□□□□□ -2.57
SRP54-214ENST00000630962 Q6AWC8 147 aa-1.03□□□□□ -2.57
SRP54-214ENST00000630962 MAFIPQ8WZ33 124 aa-1.03□□□□□ -2.57
SRP54-214ENST00000630962 NSD3Q9BZ95 1437 aa-1.04□□□□□ -2.58
SRP54-214ENST00000630962 ITPR3Q14573 2671 aa-1.04□□□□□ -2.58
SRP54-214ENST00000630962 SPAARA0A1B0GVQ0 90 aa-1.04□□□□□ -2.58
SRP54-214ENST00000630962 GNG14A0A1W2PPG7 69 aa-1.04□□□□□ -2.58
SRP54-214ENST00000630962 SCIMPQ6UWF3 145 aa-1.04□□□□□ -2.58
SRP54-214ENST00000630962 KCNRGQ8N5I3 272 aa-1.04□□□□□ -2.58
SRP54-214ENST00000630962 SPANXA1Q9NS26 97 aa-1.04□□□□□ -2.58
SRP54-214ENST00000630962 APLNQ9ULZ1 77 aa-1.04□□□□□ -2.58
SRP54-214ENST00000630962 SPEF2Q9C093 1822 aa-1.04□□□□□ -2.58
SRP54-214ENST00000630962 ARAP2Q8WZ64 1704 aa-1.04□□□□□ -2.58
SRP54-214ENST00000630962 HECTD1Q9ULT8 2610 aa-1.04□□□□□ -2.58
SRP54-214ENST00000630962 ZNF518AQ6AHZ1 1483 aa-1.05□□□□□ -2.58
SRP54-214ENST00000630962 TRBV7-4A0A0J9YYF1 115 aa-1.05□□□□□ -2.58
SRP54-214ENST00000630962 M0R2Z0 102 aa-1.05□□□□□ -2.58
SRP54-214ENST00000630962 COX8AP10176 69 aa-1.05□□□□□ -2.58
SRP54-214ENST00000630962 TPPP2P59282 170 aa-1.05□□□□□ -2.58
SRP54-214ENST00000630962 SELENOSQ9BQE4 189 aa-1.05□□□□□ -2.58
SRP54-214ENST00000630962 PRRC2CQ9Y520 2896 aaKnown RBP-1.06□□□□□ -2.58
SRP54-214ENST00000630962 PPIP5K1Q6PFW1 1433 aa-1.06□□□□□ -2.58
SRP54-214ENST00000630962 PIGBOS1A0A0B4J2F0 54 aa-1.06□□□□□ -2.58
SRP54-214ENST00000630962 NCR2O95944 276 aa-1.06□□□□□ -2.58
SRP54-214ENST00000630962 IFNGP01579 166 aa-1.06□□□□□ -2.58
SRP54-214ENST00000630962 NBEAP1P0C6P0 100 aa-1.06□□□□□ -2.58
SRP54-214ENST00000630962 ALX1Q15699 326 aa-1.06□□□□□ -2.58
SRP54-214ENST00000630962 DEFB112Q30KQ8 113 aa-1.06□□□□□ -2.58
SRP54-214ENST00000630962 NDUFA4L2Q9NRX3 87 aa-1.06□□□□□ -2.58
SRP54-214ENST00000630962 GSKIPQ9P0R6 139 aa-1.06□□□□□ -2.58
SRP54-214ENST00000630962 EPPK1P58107 5090 aaKnown RBP-1.06□□□□□ -2.58
SRP54-214ENST00000630962 DOCK2Q92608 1830 aa-1.06□□□□□ -2.58
SRP54-214ENST00000630962 SHANK2Q9UPX8 1470 aa-1.06□□□□□ -2.58
SRP54-214ENST00000630962 IGLC7A0M8Q6 106 aa-1.07□□□□□ -2.58
SRP54-214ENST00000630962 ARPC5O15511 151 aa-1.07□□□□□ -2.58
SRP54-214ENST00000630962 TSPAN19P0C672 248 aa-1.07□□□□□ -2.58
SRP54-214ENST00000630962 GUCA1AP43080 201 aaPredicted RBP-1.07□□□□□ -2.58
SRP54-214ENST00000630962 FDCSPQ8NFU4 85 aa-1.07□□□□□ -2.58
SRP54-214ENST00000630962 HMGXB3Q12766 1538 aa-1.07□□□□□ -2.58
SRP54-214ENST00000630962 DOPEY1Q5JWR5 2465 aa-1.07□□□□□ -2.58
SRP54-214ENST00000630962 PRG4Q92954 1404 aaPredicted RBP-1.07□□□□□ -2.58
SRP54-214ENST00000630962 PATJQ8NI35 1801 aa-1.08□□□□□ -2.58
SRP54-214ENST00000630962 PKD1P98161 4303 aa-1.08□□□□□ -2.58
SRP54-214ENST00000630962 SPG11Q96JI7 2443 aa-1.08□□□□□ -2.58
SRP54-214ENST00000630962 LINC00959A0A1B0GUT2 108 aa-1.08□□□□□ -2.58
SRP54-214ENST00000630962 CPSF4LA6NMK7 179 aaKnown RBP-1.08□□□□□ -2.58
SRP54-214ENST00000630962 CKS1BP61024 79 aa-1.08□□□□□ -2.58
SRP54-214ENST00000630962 TSTD1Q8NFU3 115 aa-1.08□□□□□ -2.58
SRP54-214ENST00000630962 TPT1P8Q9HAU6 139 aa-1.08□□□□□ -2.58
SRP54-214ENST00000630962 DYNLRB1Q9NP97 96 aa-1.08□□□□□ -2.58
SRP54-214ENST00000630962 LINC01558Q9Y6Z2 57 aa-1.08□□□□□ -2.58
SRP54-214ENST00000630962 KIAA0556O60303 1618 aa-1.08□□□□□ -2.58
SRP54-214ENST00000630962 ANKRD30AQ9BXX3 1397 aa-1.08□□□□□ -2.58
SRP54-214ENST00000630962 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.09□□□□□ -2.58
SRP54-214ENST00000630962 RIMS1Q86UR5 1692 aaKnown RBP-1.09□□□□□ -2.58
SRP54-214ENST00000630962 SFT2D2O95562 160 aa-1.09□□□□□ -2.58
SRP54-214ENST00000630962 HIST1H1DP16402 221 aaKnown RBP-1.09□□□□□ -2.58
SRP54-214ENST00000630962 TSLPQ969D9 159 aa-1.09□□□□□ -2.58
SRP54-214ENST00000630962 USMG5Q96IX5 58 aa-1.09□□□□□ -2.58
SRP54-214ENST00000630962 MGST2Q99735 147 aa-1.09□□□□□ -2.58
SRP54-214ENST00000630962 FASNP49327 2511 aaKnown RBP-1.09□□□□□ -2.58
SRP54-214ENST00000630962 SONP18583 2426 aaKnown RBP-1.09□□□□□ -2.58
SRP54-214ENST00000630962 AKAP9Q99996 3911 aa-1.09□□□□□ -2.58
SRP54-214ENST00000630962 TULP4Q9NRJ4 1543 aa-1.1□□□□□ -2.58
SRP54-214ENST00000630962 BTAF1O14981 1849 aa-1.1□□□□□ -2.59
SRP54-214ENST00000630962 HMGN4O00479 90 aa-1.1□□□□□ -2.59
SRP54-214ENST00000630962 MGPP08493 103 aa-1.1□□□□□ -2.59
SRP54-214ENST00000630962 UBA52P62987 128 aaKnown RBP-1.1□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms