RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 NTM-AS1Q6ZSK4 140 aa6.63□□□□□ -1.35
GABRB3-216ENST00000628124 ZNF843Q8N446 348 aa6.62□□□□□ -1.35
GABRB3-216ENST00000628124 WNK3Q9BYP7 1800 aa6.62□□□□□ -1.35
GABRB3-216ENST00000628124 NCKAP5O14513 1909 aa6.62□□□□□ -1.35
GABRB3-216ENST00000628124 HIVEP2P31629 2446 aa6.62□□□□□ -1.35
GABRB3-216ENST00000628124 SMIM11BQ8TCY0 68 aa6.62□□□□□ -1.35
GABRB3-216ENST00000628124 LINC00574Q9H8X3 128 aa6.62□□□□□ -1.35
GABRB3-216ENST00000628124 LCTP09848 1927 aa6.62□□□□□ -1.35
GABRB3-216ENST00000628124 Q6Q795 121 aa6.61□□□□□ -1.35
GABRB3-216ENST00000628124 RPL37AP8A6NKH3 93 aa6.61□□□□□ -1.35
GABRB3-216ENST00000628124 M0R2N4 97 aa6.61□□□□□ -1.35
GABRB3-216ENST00000628124 EGFEM1PQ0D2K5 195 aa6.61□□□□□ -1.35
GABRB3-216ENST00000628124 SHANK1Q9Y566 2161 aa6.61□□□□□ -1.35
GABRB3-216ENST00000628124 C1orf137Q5JT78 98 aa6.6□□□□□ -1.35
GABRB3-216ENST00000628124 CSDC2Q9Y534 153 aaKnown RBP6.6□□□□□ -1.35
GABRB3-216ENST00000628124 U3KQK5 164 aa6.6□□□□□ -1.35
GABRB3-216ENST00000628124 IGLV2-8P01709 118 aa6.6□□□□□ -1.35
GABRB3-216ENST00000628124 LINC00482Q8N8I6 264 aa6.6□□□□□ -1.35
GABRB3-216ENST00000628124 LOC100131303A0A0U1RQF7 123 aa6.6□□□□□ -1.35
GABRB3-216ENST00000628124 INAFM1C9JVW0 142 aa6.6□□□□□ -1.35
GABRB3-216ENST00000628124 M0QXV9 152 aa6.6□□□□□ -1.35
GABRB3-216ENST00000628124 Q6ZSV7 163 aa6.6□□□□□ -1.35
GABRB3-216ENST00000628124 MED13Q9UHV7 2174 aa6.6□□□□□ -1.35
GABRB3-216ENST00000628124 F8WDY8 70 aa6.6□□□□□ -1.35
GABRB3-216ENST00000628124 CIRBP-AS1Q8TBR5 109 aa6.59□□□□□ -1.35
GABRB3-216ENST00000628124 PLA2G2EQ9NZK7 142 aa6.59□□□□□ -1.35
GABRB3-216ENST00000628124 TRBV7-7A0A0K0K1E9 115 aa6.59□□□□□ -1.35
GABRB3-216ENST00000628124 C22orf34Q6ZV56 151 aa6.59□□□□□ -1.35
GABRB3-216ENST00000628124 CELA1Q9UNI1 258 aa6.59□□□□□ -1.35
GABRB3-216ENST00000628124 IGLV2-14P01704 120 aa6.59□□□□□ -1.36
GABRB3-216ENST00000628124 FRMD6-AS1P0C7T7 363 aa6.59□□□□□ -1.36
GABRB3-216ENST00000628124 LIMD2Q9BT23 127 aa6.59□□□□□ -1.36
GABRB3-216ENST00000628124 IGHV6-1A0A0B4J1U7 121 aa6.58□□□□□ -1.36
GABRB3-216ENST00000628124 REG3GQ6UW15 175 aa6.58□□□□□ -1.36
GABRB3-216ENST00000628124 MAPKAPK5-AS1Q8N8E1 139 aa6.58□□□□□ -1.36
GABRB3-216ENST00000628124 WNK1Q9H4A3 2382 aa6.58□□□□□ -1.36
GABRB3-216ENST00000628124 TSHBP01222 138 aa6.58□□□□□ -1.36
GABRB3-216ENST00000628124 P0C879 139 aa6.58□□□□□ -1.36
GABRB3-216ENST00000628124 PTPRQQ9UMZ3 2332 aa6.58□□□□□ -1.36
GABRB3-216ENST00000628124 MBD6Q96DN6 1003 aa6.58□□□□□ -1.36
GABRB3-216ENST00000628124 PSMG3-AS1Q96PY0 264 aa6.58□□□□□ -1.36
GABRB3-216ENST00000628124 EIF4EBP1Q13541 118 aaPredicted RBP6.57□□□□□ -1.36
GABRB3-216ENST00000628124 CLUHP3Q96NS8 147 aa6.57□□□□□ -1.36
GABRB3-216ENST00000628124 CYSRT1A8MQ03 144 aa6.57□□□□□ -1.36
GABRB3-216ENST00000628124 LINC01547P58512 204 aaPredicted RBP6.56□□□□□ -1.36
GABRB3-216ENST00000628124 hDV103S1A0JD37 113 aa6.56□□□□□ -1.36
GABRB3-216ENST00000628124 GDF5OSQ5U4N7 250 aa6.56□□□□□ -1.36
GABRB3-216ENST00000628124 GPR179Q6PRD1 2367 aa6.56□□□□□ -1.36
GABRB3-216ENST00000628124 MED13LQ71F56 2210 aa6.56□□□□□ -1.36
GABRB3-216ENST00000628124 C11orf1Q9H5F2 150 aa6.56□□□□□ -1.36
GABRB3-216ENST00000628124 FAM208BQ5VWN6 2430 aa6.56□□□□□ -1.36
GABRB3-216ENST00000628124 ZNF702PQ9H963 129 aa6.56□□□□□ -1.36
GABRB3-216ENST00000628124 CCDC179H3BU77 68 aa6.55□□□□□ -1.36
GABRB3-216ENST00000628124 SPINK1P00995 79 aa6.55□□□□□ -1.36
GABRB3-216ENST00000628124 GREB1LQ9C091 1923 aaPredicted RBP6.55□□□□□ -1.36
GABRB3-216ENST00000628124 XIRP1Q702N8 1843 aaKnown RBP6.55□□□□□ -1.36
GABRB3-216ENST00000628124 SBF2Q86WG5 1849 aa6.55□□□□□ -1.36
GABRB3-216ENST00000628124 ANK1P16157 1881 aa6.55□□□□□ -1.36
GABRB3-216ENST00000628124 SORL1Q92673 2214 aa6.55□□□□□ -1.36
GABRB3-216ENST00000628124 IGLV5-52A0A0A0MRZ9 124 aa6.55□□□□□ -1.36
GABRB3-216ENST00000628124 LINC00526Q96FQ7 95 aa6.55□□□□□ -1.36
GABRB3-216ENST00000628124 SOSTDC1Q6X4U4 206 aa6.55□□□□□ -1.36
GABRB3-216ENST00000628124 H0Y9P7 68 aa6.55□□□□□ -1.36
GABRB3-216ENST00000628124 KIAA1671Q9BY89 1806 aa6.54□□□□□ -1.36
GABRB3-216ENST00000628124 COL4A1P02462 1669 aa6.54□□□□□ -1.36
GABRB3-216ENST00000628124 Q8N814 137 aa6.54□□□□□ -1.36
GABRB3-216ENST00000628124 LINC00694P0DN24 101 aa6.54□□□□□ -1.36
GABRB3-216ENST00000628124 PROK1P58294 105 aa6.54□□□□□ -1.36
GABRB3-216ENST00000628124 CDC42SE2Q9NRR3 84 aa6.54□□□□□ -1.36
GABRB3-216ENST00000628124 PLXNA4Q9HCM2 1894 aa6.54□□□□□ -1.36
GABRB3-216ENST00000628124 POLR2KP53803 58 aaKnown RBP6.53□□□□□ -1.36
GABRB3-216ENST00000628124 KLLNB2CW77 178 aa6.53□□□□□ -1.36
GABRB3-216ENST00000628124 PCOTHQ58A44 107 aa6.53□□□□□ -1.36
GABRB3-216ENST00000628124 TCF20Q9UGU0 1960 aaKnown RBP6.53□□□□□ -1.36
GABRB3-216ENST00000628124 Q9BRP9 147 aa6.53□□□□□ -1.36
GABRB3-216ENST00000628124 PRORYQ9H606 182 aa6.53□□□□□ -1.36
GABRB3-216ENST00000628124 SBF1O95248 1867 aa6.53□□□□□ -1.36
GABRB3-216ENST00000628124 A8MZ25 164 aa6.52□□□□□ -1.36
GABRB3-216ENST00000628124 POM121L12Q8N7R1 296 aa6.52□□□□□ -1.37
GABRB3-216ENST00000628124 RNASE3P12724 160 aaKnown RBP6.52□□□□□ -1.37
GABRB3-216ENST00000628124 MYLKQ15746 1914 aa6.52□□□□□ -1.37
GABRB3-216ENST00000628124 LINC01006Q8NI28 216 aa6.52□□□□□ -1.37
GABRB3-216ENST00000628124 PLXNA3P51805 1871 aa6.52□□□□□ -1.37
GABRB3-216ENST00000628124 XGP55808 180 aa6.52□□□□□ -1.37
GABRB3-216ENST00000628124 BEAN1Q3B7T3 259 aa6.52□□□□□ -1.37
GABRB3-216ENST00000628124 LINC00337Q8N6G1 96 aa6.52□□□□□ -1.37
GABRB3-216ENST00000628124 DSCAML1Q8TD84 2053 aa6.51□□□□□ -1.37
GABRB3-216ENST00000628124 TRBV10-3A0A0K0K1G6 114 aa6.51□□□□□ -1.37
GABRB3-216ENST00000628124 LY6G6DO95868 133 aa6.51□□□□□ -1.37
GABRB3-216ENST00000628124 Q8N3U1 123 aa6.51□□□□□ -1.37
GABRB3-216ENST00000628124 TICRRQ7Z2Z1 1910 aa6.51□□□□□ -1.37
GABRB3-216ENST00000628124 NANOS2P60321 138 aaKnown RBP6.51□□□□□ -1.37
GABRB3-216ENST00000628124 C6orf223Q8N319 242 aa6.51□□□□□ -1.37
GABRB3-216ENST00000628124 CRIP1P50238 77 aa6.51□□□□□ -1.37
GABRB3-216ENST00000628124 Q8NA96 180 aa6.51□□□□□ -1.37
GABRB3-216ENST00000628124 VPREB1P12018 145 aa6.5□□□□□ -1.37
GABRB3-216ENST00000628124 MSMPQ1L6U9 139 aa6.5□□□□□ -1.37
GABRB3-216ENST00000628124 PSPHP1O15172 72 aa6.5□□□□□ -1.37
GABRB3-216ENST00000628124 C2orf48Q96LS8 159 aa6.5□□□□□ -1.37
GABRB3-216ENST00000628124 LINC01556Q5JQF7 62 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms