RNA–Protein interactions for RNA: ENST00000622457.1

LTBP4-238, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 2

Gene LTBP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-238	ENST00000622457	RNASEK	Q6P5S7	137 aa	Known RBP	7.71	□□□□□ -1.18
LTBP4-238	ENST00000622457		Q6ZSA8	131 aa		7.71	□□□□□ -1.18
LTBP4-238	ENST00000622457	KIR2DL4	Q99706	377 aa		7.71	□□□□□ -1.18
LTBP4-238	ENST00000622457	SEC11C	Q9BY50	192 aa		7.71	□□□□□ -1.18
LTBP4-238	ENST00000622457		D6R8Y8	96 aa		7.7	□□□□□ -1.18
LTBP4-238	ENST00000622457	TNFRSF6B	O95407	300 aa		7.7	□□□□□ -1.18
LTBP4-238	ENST00000622457	SMAGP	Q0VAQ4	97 aa		7.7	□□□□□ -1.18
LTBP4-238	ENST00000622457	BTF3L4	Q96K17	158 aa		7.7	□□□□□ -1.18
LTBP4-238	ENST00000622457	CSDC2	Q9Y534	153 aa	Known RBP	7.7	□□□□□ -1.18
LTBP4-238	ENST00000622457	IGLV10-54	A0A075B6I4	117 aa		7.69	□□□□□ -1.18
LTBP4-238	ENST00000622457	FCER1G	P30273	86 aa		7.69	□□□□□ -1.18
LTBP4-238	ENST00000622457	COMMD7	Q86VX2	200 aa		7.69	□□□□□ -1.18
LTBP4-238	ENST00000622457	ORMDL3	Q8N138	153 aa		7.69	□□□□□ -1.18
LTBP4-238	ENST00000622457	CLRN3	Q8NCR9	226 aa		7.69	□□□□□ -1.18
LTBP4-238	ENST00000622457	OR5A1	Q8NGJ0	315 aa		7.69	□□□□□ -1.18
LTBP4-238	ENST00000622457	TMEM101	Q96IK0	257 aa		7.69	□□□□□ -1.18
LTBP4-238	ENST00000622457	SMIM2	Q9BVW6	85 aa		7.69	□□□□□ -1.18
LTBP4-238	ENST00000622457	CTDSP1	Q9GZU7	261 aa		7.69	□□□□□ -1.18
LTBP4-238	ENST00000622457	LAMTOR2	Q9Y2Q5	125 aa		7.69	□□□□□ -1.18
LTBP4-238	ENST00000622457	TRAV9-1	A0A075B6T8	112 aa		7.68	□□□□□ -1.18
LTBP4-238	ENST00000622457	NPY	P01303	97 aa		7.68	□□□□□ -1.18
LTBP4-238	ENST00000622457	DGAT2L7P	Q6IED9	249 aa		7.68	□□□□□ -1.18
LTBP4-238	ENST00000622457	TIMM21	Q9BVV7	248 aa		7.68	□□□□□ -1.18
LTBP4-238	ENST00000622457	PRSS1	P07477	247 aa		7.67	□□□□□ -1.18
LTBP4-238	ENST00000622457	C10orf91	Q5T1B1	145 aa		7.67	□□□□□ -1.18
LTBP4-238	ENST00000622457	TMEM18	Q96B42	140 aa		7.67	□□□□□ -1.18
LTBP4-238	ENST00000622457	CDC42SE2	Q9NRR3	84 aa		7.67	□□□□□ -1.18
LTBP4-238	ENST00000622457	UBE2D4	Q9Y2X8	147 aa		7.67	□□□□□ -1.18
LTBP4-238	ENST00000622457	PRSS47	A8MTI9	375 aa		7.66	□□□□□ -1.18
LTBP4-238	ENST00000622457		J3QL48	77 aa		7.66	□□□□□ -1.18
LTBP4-238	ENST00000622457	CNBP	P62633	177 aa	Known RBP	7.66	□□□□□ -1.18
LTBP4-238	ENST00000622457	TMEM136	Q6ZRR5	245 aa		7.66	□□□□□ -1.18
LTBP4-238	ENST00000622457	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	7.66	□□□□□ -1.18
LTBP4-238	ENST00000622457	CARHSP1	Q9Y2V2	147 aa	Known RBP	7.66	□□□□□ -1.18
LTBP4-238	ENST00000622457	CCL25	O15444	150 aa		7.65	□□□□□ -1.18
LTBP4-238	ENST00000622457	CFAP161	Q6P656	301 aa		7.65	□□□□□ -1.18
LTBP4-238	ENST00000622457	ZNF664	Q8N3J9	261 aa		7.65	□□□□□ -1.18
LTBP4-238	ENST00000622457	PRELID3A	Q96N28	172 aa		7.65	□□□□□ -1.18
LTBP4-238	ENST00000622457	FAM30A	Q9NZY2	134 aa		7.65	□□□□□ -1.18
LTBP4-238	ENST00000622457	LRP1	Q07954	4544 aa	Known RBP	7.64	□□□□□ -1.19
LTBP4-238	ENST00000622457	IGKV3OR2-268	A0A0C4DH90	116 aa		7.64	□□□□□ -1.19
LTBP4-238	ENST00000622457	LINC00959	A0A1B0GUT2	108 aa		7.64	□□□□□ -1.19
LTBP4-238	ENST00000622457	GAGE12H	A6NDE8	117 aa		7.64	□□□□□ -1.19
LTBP4-238	ENST00000622457	SMR3B	P02814	79 aa	Predicted RBP	7.64	□□□□□ -1.19
LTBP4-238	ENST00000622457	FOXI1	Q12951	378 aa		7.64	□□□□□ -1.19
LTBP4-238	ENST00000622457	RHEB	Q15382	184 aa		7.64	□□□□□ -1.19
LTBP4-238	ENST00000622457	C15orf56	Q8N910	161 aa		7.64	□□□□□ -1.19
LTBP4-238	ENST00000622457	C9orf163	Q8N9P6	203 aa		7.64	□□□□□ -1.19
LTBP4-238	ENST00000622457	RNF213	Q63HN8	5207 aa		7.64	□□□□□ -1.19
LTBP4-238	ENST00000622457	hDV102S1	A0JD36	115 aa		7.63	□□□□□ -1.19
LTBP4-238	ENST00000622457	SS18	Q15532	418 aa		7.63	□□□□□ -1.19
LTBP4-238	ENST00000622457	MAP1LC3A	Q9H492	121 aa		7.63	□□□□□ -1.19
LTBP4-238	ENST00000622457	SPANXA1	Q9NS26	97 aa		7.63	□□□□□ -1.19
LTBP4-238	ENST00000622457	AP5S1	Q9NUS5	200 aa		7.63	□□□□□ -1.19
LTBP4-238	ENST00000622457	GVQW2	A0A096LPI5	108 aa	Predicted RBP	7.62	□□□□□ -1.19
LTBP4-238	ENST00000622457		K7EMI3	77 aa		7.62	□□□□□ -1.19
LTBP4-238	ENST00000622457	S100P	P25815	95 aa		7.62	□□□□□ -1.19
LTBP4-238	ENST00000622457	MRPS36	P82909	103 aa	Known RBP	7.62	□□□□□ -1.19
LTBP4-238	ENST00000622457	LINC01620	Q4KN68	170 aa		7.62	□□□□□ -1.19
LTBP4-238	ENST00000622457	CD164L2	Q6UWJ8	174 aa		7.62	□□□□□ -1.19
LTBP4-238	ENST00000622457	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	7.61	□□□□□ -1.19
LTBP4-238	ENST00000622457	C1orf196	B1AJZ1	125 aa		7.61	□□□□□ -1.19
LTBP4-238	ENST00000622457	RAB5A	P20339	215 aa		7.61	□□□□□ -1.19
LTBP4-238	ENST00000622457	XCL1	P47992	114 aa		7.61	□□□□□ -1.19
LTBP4-238	ENST00000622457	RPL39	P62891	51 aa	Known RBP	7.61	□□□□□ -1.19
LTBP4-238	ENST00000622457	HAMP	P81172	84 aa		7.61	□□□□□ -1.19
LTBP4-238	ENST00000622457	COX19	Q49B96	90 aa		7.61	□□□□□ -1.19
LTBP4-238	ENST00000622457		Q6ZUT4	128 aa		7.61	□□□□□ -1.19
LTBP4-238	ENST00000622457		Q8N8P6	123 aa		7.61	□□□□□ -1.19
LTBP4-238	ENST00000622457	CHAC1	Q9BUX1	264 aa		7.61	□□□□□ -1.19
LTBP4-238	ENST00000622457	IGHV1-58	A0A0C4DH39	117 aa		7.6	□□□□□ -1.19
LTBP4-238	ENST00000622457	SCX	Q7RTU7	201 aa		7.6	□□□□□ -1.19
LTBP4-238	ENST00000622457	GNB1L	Q9BYB4	327 aa		7.6	□□□□□ -1.19
LTBP4-238	ENST00000622457	NXT2	Q9NPJ8	142 aa	Known RBP	7.6	□□□□□ -1.19
LTBP4-238	ENST00000622457	PYGO1	Q9Y3Y4	419 aa		7.6	□□□□□ -1.19
LTBP4-238	ENST00000622457	IFI27	P40305	119 aa	Predicted RBP	7.59	□□□□□ -1.19
LTBP4-238	ENST00000622457	FAM104A	Q969W3	186 aa		7.59	□□□□□ -1.19
LTBP4-238	ENST00000622457	IGHV3-64	A0A075B6Q5	118 aa		7.58	□□□□□ -1.2
LTBP4-238	ENST00000622457	FAM229A	H3BQW9	127 aa		7.58	□□□□□ -1.2
LTBP4-238	ENST00000622457	MT-ND6	P03923	174 aa		7.58	□□□□□ -1.2
LTBP4-238	ENST00000622457	SLPI	P03973	132 aa		7.58	□□□□□ -1.2
LTBP4-238	ENST00000622457	NPS	P0C0P6	89 aa		7.58	□□□□□ -1.2
LTBP4-238	ENST00000622457	CIRBP	Q14011	172 aa	Known RBP	7.58	□□□□□ -1.2
LTBP4-238	ENST00000622457	ORMDL2	Q53FV1	153 aa		7.58	□□□□□ -1.2
LTBP4-238	ENST00000622457	SDIM1	Q6ZPB5	146 aa		7.58	□□□□□ -1.2
LTBP4-238	ENST00000622457	TRAV13-1	A0A0B4J241	112 aa		7.57	□□□□□ -1.2
LTBP4-238	ENST00000622457	LOC389332	A0A1B0GUA5	103 aa		7.57	□□□□□ -1.2
LTBP4-238	ENST00000622457	COX7A2L	O14548	114 aa		7.57	□□□□□ -1.2
LTBP4-238	ENST00000622457	NDUFA5	Q16718	116 aa		7.57	□□□□□ -1.2
LTBP4-238	ENST00000622457	RNASE13	Q5GAN3	156 aa	Known RBP	7.57	□□□□□ -1.2
LTBP4-238	ENST00000622457	SVBP	Q8N300	66 aa		7.57	□□□□□ -1.2
LTBP4-238	ENST00000622457	CIRBP-AS1	Q8TBR5	109 aa		7.57	□□□□□ -1.2
LTBP4-238	ENST00000622457	RPS10P5	Q9NQ39	176 aa		7.57	□□□□□ -1.2
LTBP4-238	ENST00000622457	CYSLTR1	Q9Y271	337 aa		7.57	□□□□□ -1.2
LTBP4-238	ENST00000622457	SNAPIN	O95295	136 aa		7.56	□□□□□ -1.2
LTBP4-238	ENST00000622457	G0S2	P27469	103 aa		7.56	□□□□□ -1.2
LTBP4-238	ENST00000622457	HIGD2B	Q4VC39	106 aa		7.56	□□□□□ -1.2
LTBP4-238	ENST00000622457	TMEM141	Q96I45	108 aa		7.56	□□□□□ -1.2
LTBP4-238	ENST00000622457	PLA2G2D	Q9UNK4	145 aa		7.56	□□□□□ -1.2
LTBP4-238	ENST00000622457	PKIG	Q9Y2B9	76 aa		7.56	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms