RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 SRSF3P84103 164 aaKnown RBP13.1□□□□□ -0.31
SMC6-210ENST00000621152 TRBV27A0A0K0K1C4 114 aa13.09□□□□□ -0.31
SMC6-210ENST00000621152 LINC00959A0A1B0GUT2 108 aa13.08□□□□□ -0.32
SMC6-210ENST00000621152 CHTF8P0CG12 524 aa13.08□□□□□ -0.32
SMC6-210ENST00000621152 XCL1P47992 114 aa13.08□□□□□ -0.32
SMC6-210ENST00000621152 FOXI1Q12951 378 aa13.08□□□□□ -0.32
SMC6-210ENST00000621152 CIRBPQ14011 172 aaKnown RBP13.08□□□□□ -0.32
SMC6-210ENST00000621152 PPP1R17O96001 155 aa13.07□□□□□ -0.32
SMC6-210ENST00000621152 CDC42SE2Q9NRR3 84 aa13.07□□□□□ -0.32
SMC6-210ENST00000621152 SMIM27A0A1W2PRY6 76 aa13.06□□□□□ -0.32
SMC6-210ENST00000621152 C7orf77A4D0Y5 90 aa13.06□□□□□ -0.32
SMC6-210ENST00000621152 CCL25O15444 150 aa13.06□□□□□ -0.32
SMC6-210ENST00000621152 FCER1GP30273 86 aa13.06□□□□□ -0.32
SMC6-210ENST00000621152 CAMPP49913 170 aa13.06□□□□□ -0.32
SMC6-210ENST00000621152 COX6A2Q02221 97 aa13.06□□□□□ -0.32
SMC6-210ENST00000621152 SS18Q15532 418 aa13.06□□□□□ -0.32
SMC6-210ENST00000621152 MRPL52Q86TS9 123 aaKnown RBP13.06□□□□□ -0.32
SMC6-210ENST00000621152 ZNF664Q8N3J9 261 aa13.06□□□□□ -0.32
SMC6-210ENST00000621152 NRACQ8N912 160 aa13.06□□□□□ -0.32
SMC6-210ENST00000621152 SMDT1Q9H4I9 107 aa13.06□□□□□ -0.32
SMC6-210ENST00000621152 A0A087WYN8 130 aa13.05□□□□□ -0.32
SMC6-210ENST00000621152 SUMO2P61956 95 aaKnown RBP13.05□□□□□ -0.32
SMC6-210ENST00000621152 MRPL51Q4U2R6 128 aaKnown RBP13.05□□□□□ -0.32
SMC6-210ENST00000621152 FAM104BQ5XKR9 115 aa13.05□□□□□ -0.32
SMC6-210ENST00000621152 GVQW2A0A096LPI5 108 aaPredicted RBP13.04□□□□□ -0.32
SMC6-210ENST00000621152 OXTP01178 125 aa13.04□□□□□ -0.32
SMC6-210ENST00000621152 PRSS3P2Q8NHM4 247 aa13.03□□□□□ -0.32
SMC6-210ENST00000621152 SPACA4Q8TDM5 124 aa13.03□□□□□ -0.32
SMC6-210ENST00000621152 HNRNPA3P51991 378 aaKnown RBP13.02□□□□□ -0.33
SMC6-210ENST00000621152 KIR2DL4Q99706 377 aa13.02□□□□□ -0.33
SMC6-210ENST00000621152 IGHV1-58A0A0C4DH39 117 aa13.01□□□□□ -0.33
SMC6-210ENST00000621152 LINC00862A6NCI5 91 aa13.01□□□□□ -0.33
SMC6-210ENST00000621152 PPP1R2P9O14990 202 aa13.01□□□□□ -0.33
SMC6-210ENST00000621152 CD164L2Q6UWJ8 174 aa13.01□□□□□ -0.33
SMC6-210ENST00000621152 LINC00526Q96FQ7 95 aa13.01□□□□□ -0.33
SMC6-210ENST00000621152 IGKV2-24A0A0C4DH68 120 aa13□□□□□ -0.33
SMC6-210ENST00000621152 A0A1B0GW15 77 aa13□□□□□ -0.33
SMC6-210ENST00000621152 CKS2P33552 79 aa13□□□□□ -0.33
SMC6-210ENST00000621152 SMAGPQ0VAQ4 97 aa13□□□□□ -0.33
SMC6-210ENST00000621152 MAJINQ3KP22 176 aa13□□□□□ -0.33
SMC6-210ENST00000621152 PLAC8Q9NZF1 115 aa13□□□□□ -0.33
SMC6-210ENST00000621152 C20orf78Q9BR46 151 aa12.99□□□□□ -0.33
SMC6-210ENST00000621152 UBE2D4Q9Y2X8 147 aa12.99□□□□□ -0.33
SMC6-210ENST00000621152 CSDC2Q9Y534 153 aaKnown RBP12.99□□□□□ -0.33
SMC6-210ENST00000621152 MRPL54Q6P161 138 aaKnown RBP12.98□□□□□ -0.33
SMC6-210ENST00000621152 TRBV24-1A0A075B6N3 115 aa12.97□□□□□ -0.33
SMC6-210ENST00000621152 C1orf196B1AJZ1 125 aa12.97□□□□□ -0.33
SMC6-210ENST00000621152 ZNF561-AS1K7EIQ3 104 aa12.97□□□□□ -0.33
SMC6-210ENST00000621152 RNASE13Q5GAN3 156 aaKnown RBP12.97□□□□□ -0.33
SMC6-210ENST00000621152 TMEM18Q96B42 140 aa12.97□□□□□ -0.33
SMC6-210ENST00000621152 F8W036 122 aa12.96□□□□□ -0.33
SMC6-210ENST00000621152 TNFRSF6BO95407 300 aa12.96□□□□□ -0.33
SMC6-210ENST00000621152 S100A8P05109 93 aa12.96□□□□□ -0.33
SMC6-210ENST00000621152 TRAV13-1A0A0B4J241 112 aa12.95□□□□□ -0.34
SMC6-210ENST00000621152 HBBP68871 147 aa12.95□□□□□ -0.34
SMC6-210ENST00000621152 STPG4Q8N801 248 aa12.95□□□□□ -0.34
SMC6-210ENST00000621152 A0A096LNI7 61 aa12.94□□□□□ -0.34
SMC6-210ENST00000621152 MALP21145 153 aa12.94□□□□□ -0.34
SMC6-210ENST00000621152 RPL32P62910 135 aaKnown RBP12.94□□□□□ -0.34
SMC6-210ENST00000621152 C7orf33Q8WU49 177 aa12.94□□□□□ -0.34
SMC6-210ENST00000621152 CARD19Q96LW7 228 aa12.94□□□□□ -0.34
SMC6-210ENST00000621152 TIMM21Q9BVV7 248 aa12.94□□□□□ -0.34
SMC6-210ENST00000621152 D6R8Y8 96 aa12.93□□□□□ -0.34
SMC6-210ENST00000621152 COX7A2LO14548 114 aa12.93□□□□□ -0.34
SMC6-210ENST00000621152 PHOX2AO14813 284 aa12.93□□□□□ -0.34
SMC6-210ENST00000621152 SYCNQ0VAF6 134 aa12.93□□□□□ -0.34
SMC6-210ENST00000621152 A0A1B0GXF2 115 aa12.92□□□□□ -0.34
SMC6-210ENST00000621152 TCAPO15273 167 aa12.92□□□□□ -0.34
SMC6-210ENST00000621152 LRP1Q07954 4544 aaKnown RBP12.92□□□□□ -0.34
SMC6-210ENST00000621152 IGLV4-69A0A075B6H9 119 aa12.91□□□□□ -0.34
SMC6-210ENST00000621152 NPYP01303 97 aa12.91□□□□□ -0.34
SMC6-210ENST00000621152 RPL39P62891 51 aaKnown RBP12.91□□□□□ -0.34
SMC6-210ENST00000621152 SERTAD4-AS1Q5TG53 156 aa12.91□□□□□ -0.34
SMC6-210ENST00000621152 Q6ZRU5 148 aa12.91□□□□□ -0.34
SMC6-210ENST00000621152 Q6ZUT4 128 aa12.91□□□□□ -0.34
SMC6-210ENST00000621152 C5orf38Q86SI9 138 aa12.91□□□□□ -0.34
SMC6-210ENST00000621152 SMIM2Q9BVW6 85 aa12.91□□□□□ -0.34
SMC6-210ENST00000621152 LINC00474Q9P2X8 69 aa12.91□□□□□ -0.34
SMC6-210ENST00000621152 PKIGQ9Y2B9 76 aa12.91□□□□□ -0.34
SMC6-210ENST00000621152 PPBPP02775 128 aa12.9□□□□□ -0.34
SMC6-210ENST00000621152 TMEM136Q6ZRR5 245 aa12.88□□□□□ -0.35
SMC6-210ENST00000621152 OPRPNQ99935 248 aaPredicted RBP12.88□□□□□ -0.35
SMC6-210ENST00000621152 RAB14P61106 215 aa12.87□□□□□ -0.35
SMC6-210ENST00000621152 ATP5L2Q7Z4Y8 100 aa12.87□□□□□ -0.35
SMC6-210ENST00000621152 ORMDL3Q8N138 153 aa12.87□□□□□ -0.35
SMC6-210ENST00000621152 APOMO95445 188 aa12.86□□□□□ -0.35
SMC6-210ENST00000621152 GAGE2BQ13066 116 aa12.86□□□□□ -0.35
SMC6-210ENST00000621152 FAM104AQ969W3 186 aa12.86□□□□□ -0.35
SMC6-210ENST00000621152 PRELID3AQ96N28 172 aa12.86□□□□□ -0.35
SMC6-210ENST00000621152 CAMK2N2Q96S95 79 aa12.86□□□□□ -0.35
SMC6-210ENST00000621152 SPANXA1Q9NS26 97 aa12.86□□□□□ -0.35
SMC6-210ENST00000621152 RAB5AP20339 215 aa12.85□□□□□ -0.35
SMC6-210ENST00000621152 FAT3Q8TDW7 4589 aa12.85□□□□□ -0.35
SMC6-210ENST00000621152 PKHD1L1Q86WI1 4243 aa12.84□□□□□ -0.35
SMC6-210ENST00000621152 LOC107984640A0A0U1RRK4 108 aa12.84□□□□□ -0.35
SMC6-210ENST00000621152 MRPS36P82909 103 aaKnown RBP12.84□□□□□ -0.35
SMC6-210ENST00000621152 C2orf48Q96LS8 159 aa12.84□□□□□ -0.35
SMC6-210ENST00000621152 MT-ND4LP03901 98 aa12.83□□□□□ -0.36
SMC6-210ENST00000621152 PTTG1IPP53801 180 aa12.83□□□□□ -0.36
SMC6-210ENST00000621152 PNRC1Q12796 327 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms