RNA–Protein interactions for RNA: ENST00000619587.1

LHX3-203, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,698 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-203ENST00000619587 Q9H8V8 135 aa12.52□□□□□ -0.41
LHX3-203ENST00000619587 EDA2RQ9HAV5 297 aa12.52□□□□□ -0.41
LHX3-203ENST00000619587 PEMTQ9UBM1 199 aa12.52□□□□□ -0.41
LHX3-203ENST00000619587 C2CD3Q4AC94 2353 aa12.51□□□□□ -0.41
LHX3-203ENST00000619587 C22orf24Q9Y442 160 aa12.51□□□□□ -0.41
LHX3-203ENST00000619587 CSMD2Q7Z408 3487 aa12.51□□□□□ -0.41
LHX3-203ENST00000619587 C2orf48Q96LS8 159 aa12.51□□□□□ -0.41
LHX3-203ENST00000619587 CRYGAP11844 174 aa12.5□□□□□ -0.41
LHX3-203ENST00000619587 BAALC-AS2P0C853 105 aa12.49□□□□□ -0.41
LHX3-203ENST00000619587 CFHR3Q02985 330 aa12.49□□□□□ -0.41
LHX3-203ENST00000619587 BEAN1Q3B7T3 259 aa12.49□□□□□ -0.41
LHX3-203ENST00000619587 FAM218AQ96MZ4 157 aa12.49□□□□□ -0.41
LHX3-203ENST00000619587 CIRBPQ14011 172 aaKnown RBP12.49□□□□□ -0.41
LHX3-203ENST00000619587 TIRAPP58753 221 aa12.48□□□□□ -0.41
LHX3-203ENST00000619587 CUBNO60494 3623 aa12.48□□□□□ -0.41
LHX3-203ENST00000619587 hADV29S1A0JD25 119 aa12.47□□□□□ -0.41
LHX3-203ENST00000619587 ATOX1O00244 68 aa12.47□□□□□ -0.41
LHX3-203ENST00000619587 SYNJ2BPP57105 145 aa12.47□□□□□ -0.41
LHX3-203ENST00000619587 RPS28P62857 69 aaKnown RBP12.47□□□□□ -0.41
LHX3-203ENST00000619587 TRACP01848 142 aa12.46□□□□□ -0.41
LHX3-203ENST00000619587 OR13C6PQ8NH95 151 aa12.46□□□□□ -0.41
LHX3-203ENST00000619587 IGHV3OR16-12A0A075B7B8 117 aa12.46□□□□□ -0.41
LHX3-203ENST00000619587 IGLV5-45A0A087WSX0 123 aa12.46□□□□□ -0.41
LHX3-203ENST00000619587 IGHV4-61A0A0C4DH41 118 aa12.46□□□□□ -0.41
LHX3-203ENST00000619587 HIST1H4AP62805 103 aaKnown RBP12.45□□□□□ -0.42
LHX3-203ENST00000619587 Q9HAA7 133 aa12.45□□□□□ -0.42
LHX3-203ENST00000619587 INAFM2P0DMQ5 153 aa12.45□□□□□ -0.42
LHX3-203ENST00000619587 NOTCH3Q9UM47 2321 aa12.44□□□□□ -0.42
LHX3-203ENST00000619587 IGLV5-39A0A0G2JS06 123 aa12.44□□□□□ -0.42
LHX3-203ENST00000619587 PSMB8P28062 276 aa12.44□□□□□ -0.42
LHX3-203ENST00000619587 DGAT2L7PQ6IED9 249 aa12.44□□□□□ -0.42
LHX3-203ENST00000619587 LINC00242Q5T6M2 205 aa12.44□□□□□ -0.42
LHX3-203ENST00000619587 CYSTM1Q9H1C7 97 aa12.44□□□□□ -0.42
LHX3-203ENST00000619587 HOXD3P31249 432 aaPredicted RBP12.43□□□□□ -0.42
LHX3-203ENST00000619587 PIK3CD-AS1Q5SR53 167 aa12.43□□□□□ -0.42
LHX3-203ENST00000619587 RS1O15537 224 aa12.42□□□□□ -0.42
LHX3-203ENST00000619587 RBMY1BA6NDE4 496 aaKnown RBP12.42□□□□□ -0.42
LHX3-203ENST00000619587 RBMY1EA6NEQ0 496 aaKnown RBP12.42□□□□□ -0.42
LHX3-203ENST00000619587 SMIM1B2RUZ4 78 aa12.42□□□□□ -0.42
LHX3-203ENST00000619587 RBMY1DP0C7P1 496 aaKnown RBP12.42□□□□□ -0.42
LHX3-203ENST00000619587 KLRB1Q12918 225 aa12.42□□□□□ -0.42
LHX3-203ENST00000619587 FAM222AQ5U5X8 452 aa12.42□□□□□ -0.42
LHX3-203ENST00000619587 PRIMA1Q86XR5 153 aa12.42□□□□□ -0.42
LHX3-203ENST00000619587 TRAV13-1A0A0B4J241 112 aa12.41□□□□□ -0.42
LHX3-203ENST00000619587 RPL18AQ02543 176 aaKnown RBP12.4□□□□□ -0.42
LHX3-203ENST00000619587 RNF152Q8N8N0 203 aa12.4□□□□□ -0.42
LHX3-203ENST00000619587 PIMREGQ9BSJ6 248 aa12.4□□□□□ -0.42
LHX3-203ENST00000619587 ZANQ9Y493 2812 aa12.39□□□□□ -0.43
LHX3-203ENST00000619587 DEFB131AP59861 70 aa12.39□□□□□ -0.43
LHX3-203ENST00000619587 C9orf129Q5T035 196 aaKnown RBP12.39□□□□□ -0.43
LHX3-203ENST00000619587 COPS9Q8WXC6 57 aa12.39□□□□□ -0.43
LHX3-203ENST00000619587 IGHV3-53P01767 116 aa12.39□□□□□ -0.43
LHX3-203ENST00000619587 KIR2DL5BQ8NHK3 375 aa12.39□□□□□ -0.43
LHX3-203ENST00000619587 MALP21145 153 aa12.38□□□□□ -0.43
LHX3-203ENST00000619587 TMEM258P61165 79 aa12.38□□□□□ -0.43
LHX3-203ENST00000619587 DPH3Q96FX2 82 aa12.38□□□□□ -0.43
LHX3-203ENST00000619587 AVPP01185 164 aa12.37□□□□□ -0.43
LHX3-203ENST00000619587 ZNF415Q09FC8 603 aa12.37□□□□□ -0.43
LHX3-203ENST00000619587 NCOR2Q9Y618 2525 aa12.37□□□□□ -0.43
LHX3-203ENST00000619587 WIPF1O43516 503 aa12.37□□□□□ -0.43
LHX3-203ENST00000619587 DNAL4O96015 105 aa12.37□□□□□ -0.43
LHX3-203ENST00000619587 C19orf84I3L1E1 186 aa12.36□□□□□ -0.43
LHX3-203ENST00000619587 IGKV3D-7A0A0C4DH55 119 aa12.35□□□□□ -0.43
LHX3-203ENST00000619587 IGHV4-59P01825 116 aa12.35□□□□□ -0.43
LHX3-203ENST00000619587 C11orf72Q8NBR9 251 aa12.35□□□□□ -0.43
LHX3-203ENST00000619587 SERP2Q8N6R1 65 aa12.34□□□□□ -0.43
LHX3-203ENST00000619587 PRORYQ9H606 182 aa12.34□□□□□ -0.43
LHX3-203ENST00000619587 USP9YO00507 2555 aaPredicted RBP12.34□□□□□ -0.43
LHX3-203ENST00000619587 TRAV25A0A0B4J276 109 aa12.34□□□□□ -0.43
LHX3-203ENST00000619587 CHD8Q9HCK8 2581 aa12.34□□□□□ -0.43
LHX3-203ENST00000619587 F5H768 121 aa12.34□□□□□ -0.43
LHX3-203ENST00000619587 HIST2H2BCQ6DN03 193 aa12.34□□□□□ -0.43
LHX3-203ENST00000619587 HIST2H2BDQ6DRA6 164 aa12.34□□□□□ -0.43
LHX3-203ENST00000619587 LINC00337Q8N6G1 96 aa12.34□□□□□ -0.43
LHX3-203ENST00000619587 Q96MF0 132 aa12.34□□□□□ -0.43
LHX3-203ENST00000619587 C14orf132Q9NPU4 83 aa12.34□□□□□ -0.43
LHX3-203ENST00000619587 A0A087WYN8 130 aa12.33□□□□□ -0.44
LHX3-203ENST00000619587 DSCR8Q96T75 97 aa12.33□□□□□ -0.44
LHX3-203ENST00000619587 UPK3BQ9BT76 320 aa12.33□□□□□ -0.44
LHX3-203ENST00000619587 MYO9AB2RTY4 2548 aa12.33□□□□□ -0.44
LHX3-203ENST00000619587 MXRA5Q9NR99 2828 aa12.32□□□□□ -0.44
LHX3-203ENST00000619587 A0A087WVE0 104 aa12.32□□□□□ -0.44
LHX3-203ENST00000619587 OXTP01178 125 aa12.32□□□□□ -0.44
LHX3-203ENST00000619587 TMEM89A2RUT3 159 aa12.31□□□□□ -0.44
LHX3-203ENST00000619587 Q6JHZ5 121 aa12.31□□□□□ -0.44
LHX3-203ENST00000619587 IGKV2-28A0A075B6P5 120 aa12.31□□□□□ -0.44
LHX3-203ENST00000619587 IGKV2D-28P01615 120 aa12.31□□□□□ -0.44
LHX3-203ENST00000619587 CRPP02741 224 aa12.31□□□□□ -0.44
LHX3-203ENST00000619587 RPL28P46779 137 aaKnown RBP12.31□□□□□ -0.44
LHX3-203ENST00000619587 DEFB136Q30KP8 78 aa12.31□□□□□ -0.44
LHX3-203ENST00000619587 IGHV4-30-2A0A087WSY4 118 aa12.3□□□□□ -0.44
LHX3-203ENST00000619587 NTM-AS1Q6ZSK4 140 aa12.3□□□□□ -0.44
LHX3-203ENST00000619587 LINC00846Q9NV44 126 aa12.3□□□□□ -0.44
LHX3-203ENST00000619587 SLURP1P55000 103 aa12.29□□□□□ -0.44
LHX3-203ENST00000619587 C10orf105Q8TEF2 133 aa12.29□□□□□ -0.44
LHX3-203ENST00000619587 C18orf65Q6ZTR6 163 aa12.29□□□□□ -0.44
LHX3-203ENST00000619587 MIR7-3HGQ8N6C7 128 aa12.29□□□□□ -0.44
LHX3-203ENST00000619587 A8MTW9 85 aa12.28□□□□□ -0.44
LHX3-203ENST00000619587 MSMBP08118 114 aa12.28□□□□□ -0.44
LHX3-203ENST00000619587 DEFB112Q30KQ8 113 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms