RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 Q6ZSV7 163 aa8.53□□□□□ -1.04
C11orf54-215ENST00000617482 Q8N2B8 174 aa8.53□□□□□ -1.04
C11orf54-215ENST00000617482 CSDC2Q9Y534 153 aaKnown RBP8.53□□□□□ -1.04
C11orf54-215ENST00000617482 CHD6Q8TD26 2715 aa8.53□□□□□ -1.04
C11orf54-215ENST00000617482 NBPF19A0A087WUL8 3843 aa8.52□□□□□ -1.05
C11orf54-215ENST00000617482 INSP01308 110 aa8.52□□□□□ -1.05
C11orf54-215ENST00000617482 PIK3CD-AS1Q5SR53 167 aa8.52□□□□□ -1.05
C11orf54-215ENST00000617482 Q96MF0 132 aa8.52□□□□□ -1.05
C11orf54-215ENST00000617482 CDKN2A-AS1Q9UH64 79 aa8.52□□□□□ -1.05
C11orf54-215ENST00000617482 A0A1W2PRX2 142 aa8.52□□□□□ -1.05
C11orf54-215ENST00000617482 XGP55808 180 aa8.52□□□□□ -1.05
C11orf54-215ENST00000617482 DAND5Q8N907 189 aa8.52□□□□□ -1.05
C11orf54-215ENST00000617482 TRIAP1O43715 76 aa8.51□□□□□ -1.05
C11orf54-215ENST00000617482 BEAN1Q3B7T3 259 aa8.51□□□□□ -1.05
C11orf54-215ENST00000617482 SONP18583 2426 aaKnown RBP8.51□□□□□ -1.05
C11orf54-215ENST00000617482 WNK1Q9H4A3 2382 aa8.51□□□□□ -1.05
C11orf54-215ENST00000617482 DEFB113Q30KQ7 82 aa8.51□□□□□ -1.05
C11orf54-215ENST00000617482 DGAT2L7PQ6IED9 249 aa8.51□□□□□ -1.05
C11orf54-215ENST00000617482 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.51□□□□□ -1.05
C11orf54-215ENST00000617482 AKAP9Q99996 3911 aa8.51□□□□□ -1.05
C11orf54-215ENST00000617482 EPG5Q9HCE0 2579 aa8.5□□□□□ -1.05
C11orf54-215ENST00000617482 RS1O15537 224 aa8.5□□□□□ -1.05
C11orf54-215ENST00000617482 COX6A2Q02221 97 aa8.5□□□□□ -1.05
C11orf54-215ENST00000617482 ATXN8Q156A1 80 aa8.5□□□□□ -1.05
C11orf54-215ENST00000617482 DNAJC30Q96LL9 226 aa8.5□□□□□ -1.05
C11orf54-215ENST00000617482 NOTCH3Q9UM47 2321 aa8.5□□□□□ -1.05
C11orf54-215ENST00000617482 TRGV1A0A0A0MS02 117 aa8.5□□□□□ -1.05
C11orf54-215ENST00000617482 MIAQ16674 131 aa8.5□□□□□ -1.05
C11orf54-215ENST00000617482 ODF3L2Q3SX64 289 aa8.5□□□□□ -1.05
C11orf54-215ENST00000617482 STHQ8IWL8 128 aa8.5□□□□□ -1.05
C11orf54-215ENST00000617482 LRRC75A-AS1Q8N1F1 130 aa8.5□□□□□ -1.05
C11orf54-215ENST00000617482 ZNF843Q8N446 348 aa8.5□□□□□ -1.05
C11orf54-215ENST00000617482 SPANXDQ9BXN6 97 aa8.5□□□□□ -1.05
C11orf54-215ENST00000617482 SPANXCQ9NY87 97 aa8.5□□□□□ -1.05
C11orf54-215ENST00000617482 NF1P21359 2839 aa8.5□□□□□ -1.05
C11orf54-215ENST00000617482 LINC01620Q4KN68 170 aa8.49□□□□□ -1.05
C11orf54-215ENST00000617482 TRBV30A0A0K0K1B3 111 aa8.49□□□□□ -1.05
C11orf54-215ENST00000617482 NDUFA7O95182 113 aa8.49□□□□□ -1.05
C11orf54-215ENST00000617482 SEC61GP60059 68 aa8.49□□□□□ -1.05
C11orf54-215ENST00000617482 ZFAND6Q6FIF0 208 aa8.49□□□□□ -1.05
C11orf54-215ENST00000617482 C1orf158Q8N1D5 194 aa8.49□□□□□ -1.05
C11orf54-215ENST00000617482 TMEM101Q96IK0 257 aa8.49□□□□□ -1.05
C11orf54-215ENST00000617482 APCP25054 2843 aa8.48□□□□□ -1.05
C11orf54-215ENST00000617482 LINC00694P0DN24 101 aa8.48□□□□□ -1.05
C11orf54-215ENST00000617482 NTN5Q8WTR8 489 aaPredicted RBP8.48□□□□□ -1.05
C11orf54-215ENST00000617482 ZNF625Q96I27 306 aaPredicted RBP8.48□□□□□ -1.05
C11orf54-215ENST00000617482 ICOSQ9Y6W8 199 aa8.48□□□□□ -1.05
C11orf54-215ENST00000617482 A0A0U1RRA0 63 aa8.47□□□□□ -1.05
C11orf54-215ENST00000617482 HIST2H2BCQ6DN03 193 aa8.47□□□□□ -1.05
C11orf54-215ENST00000617482 PPDPFQ9H3Y8 114 aa8.47□□□□□ -1.05
C11orf54-215ENST00000617482 NIPBLQ6KC79 2804 aaeCLIP8.47□□□□□ -1.05
C11orf54-215ENST00000617482 TEX49A0A1B0GTD5 131 aa8.46□□□□□ -1.05
C11orf54-215ENST00000617482 Q6ZTI0 123 aa8.46□□□□□ -1.05
C11orf54-215ENST00000617482 C2CD3Q4AC94 2353 aa8.46□□□□□ -1.05
C11orf54-215ENST00000617482 TRAV13-1A0A0B4J241 112 aa8.46□□□□□ -1.06
C11orf54-215ENST00000617482 SMIM9A6NGZ8 99 aa8.46□□□□□ -1.06
C11orf54-215ENST00000617482 TIRAPP58753 221 aa8.46□□□□□ -1.06
C11orf54-215ENST00000617482 CLEC2BQ92478 149 aa8.46□□□□□ -1.06
C11orf54-215ENST00000617482 LINC00242Q5T6M2 205 aa8.45□□□□□ -1.06
C11orf54-215ENST00000617482 SETD2Q9BYW2 2564 aaPredicted RBP8.45□□□□□ -1.06
C11orf54-215ENST00000617482 ITPR3Q14573 2671 aa8.45□□□□□ -1.06
C11orf54-215ENST00000617482 MRPL23Q16540 153 aaKnown RBP8.45□□□□□ -1.06
C11orf54-215ENST00000617482 Q9H8V8 135 aa8.45□□□□□ -1.06
C11orf54-215ENST00000617482 IGLV5-45A0A087WSX0 123 aa8.44□□□□□ -1.06
C11orf54-215ENST00000617482 TRBV10-2A0A0K0K1G8 114 aa8.44□□□□□ -1.06
C11orf54-215ENST00000617482 B5MCH6 92 aa8.44□□□□□ -1.06
C11orf54-215ENST00000617482 TMEM262E9PQX1 116 aa8.44□□□□□ -1.06
C11orf54-215ENST00000617482 CCL24O00175 119 aa8.44□□□□□ -1.06
C11orf54-215ENST00000617482 NDUFA1O15239 70 aa8.44□□□□□ -1.06
C11orf54-215ENST00000617482 COX6CP09669 75 aa8.44□□□□□ -1.06
C11orf54-215ENST00000617482 RPL13AP40429 203 aaKnown RBP8.44□□□□□ -1.06
C11orf54-215ENST00000617482 NTM-AS1Q6ZSK4 140 aa8.44□□□□□ -1.06
C11orf54-215ENST00000617482 GAGE12JA6NER3 117 aa8.44□□□□□ -1.06
C11orf54-215ENST00000617482 H7C423 109 aa8.44□□□□□ -1.06
C11orf54-215ENST00000617482 RPL36AP83881 106 aaKnown RBP8.44□□□□□ -1.06
C11orf54-215ENST00000617482 GAGE4Q13068 117 aa8.44□□□□□ -1.06
C11orf54-215ENST00000617482 MRAPQ8TCY5 172 aa8.44□□□□□ -1.06
C11orf54-215ENST00000617482 RPL36ALQ969Q0 106 aaKnown RBP8.44□□□□□ -1.06
C11orf54-215ENST00000617482 RNF183Q96D59 192 aa8.44□□□□□ -1.06
C11orf54-215ENST00000617482 DNAJC9-AS1A6NH13 148 aa8.43□□□□□ -1.06
C11orf54-215ENST00000617482 HERVK_113P63121 156 aa8.43□□□□□ -1.06
C11orf54-215ENST00000617482 C2orf82Q6UX34 121 aa8.43□□□□□ -1.06
C11orf54-215ENST00000617482 KRTAP1-3Q8IUG1 177 aa8.43□□□□□ -1.06
C11orf54-215ENST00000617482 NOP10Q9NPE3 64 aaKnown RBP8.43□□□□□ -1.06
C11orf54-215ENST00000617482 CCDC168Q8NDH2 2452 aa8.43□□□□□ -1.06
C11orf54-215ENST00000617482 K7EQD1 137 aa8.43□□□□□ -1.06
C11orf54-215ENST00000617482 TIMM17BO60830 172 aa8.43□□□□□ -1.06
C11orf54-215ENST00000617482 CIRBPQ14011 172 aaKnown RBP8.43□□□□□ -1.06
C11orf54-215ENST00000617482 IFITM1P13164 125 aa8.42□□□□□ -1.06
C11orf54-215ENST00000617482 WFDC11Q8NEX6 87 aa8.42□□□□□ -1.06
C11orf54-215ENST00000617482 IL17DQ8TAD2 202 aa8.42□□□□□ -1.06
C11orf54-215ENST00000617482 ESM1Q9NQ30 184 aa8.42□□□□□ -1.06
C11orf54-215ENST00000617482 IGLV5-39A0A0G2JS06 123 aa8.41□□□□□ -1.06
C11orf54-215ENST00000617482 LINC00308Q8TCZ7 52 aa8.41□□□□□ -1.06
C11orf54-215ENST00000617482 WFDC10AQ9H1F0 79 aa8.41□□□□□ -1.06
C11orf54-215ENST00000617482 JMJD1CQ15652 2540 aa8.41□□□□□ -1.06
C11orf54-215ENST00000617482 TENM4Q6N022 2769 aa8.41□□□□□ -1.06
C11orf54-215ENST00000617482 SMIM1B2RUZ4 78 aa8.41□□□□□ -1.06
C11orf54-215ENST00000617482 DAZ2Q13117 558 aaKnown RBP8.41□□□□□ -1.06
C11orf54-215ENST00000617482 DAZ4Q86SG3 579 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms