RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 C11orf21Q9P2W6 132 aa7.52□□□□□ -1.21
SMARCA1-205ENST00000617310 TRBV6-1A0A0K0K1D8 114 aa7.51□□□□□ -1.21
SMARCA1-205ENST00000617310 CDK2AP2O75956 126 aa7.51□□□□□ -1.21
SMARCA1-205ENST00000617310 LOC100131303A0A0U1RQF7 123 aa7.51□□□□□ -1.21
SMARCA1-205ENST00000617310 TIMM17AQ99595 171 aa7.51□□□□□ -1.21
SMARCA1-205ENST00000617310 TRAV8-4A0A0B4J246 113 aa7.51□□□□□ -1.21
SMARCA1-205ENST00000617310 TRBV10-1A0A0K0K1A3 114 aa7.51□□□□□ -1.21
SMARCA1-205ENST00000617310 BAALCQ8WXS3 180 aa7.51□□□□□ -1.21
SMARCA1-205ENST00000617310 PRO1854Q9UHT4 67 aa7.51□□□□□ -1.21
SMARCA1-205ENST00000617310 GAGE12HA6NDE8 117 aa7.5□□□□□ -1.21
SMARCA1-205ENST00000617310 BRI3O95415 125 aa7.5□□□□□ -1.21
SMARCA1-205ENST00000617310 ETDBQ3ZM63 59 aa7.5□□□□□ -1.21
SMARCA1-205ENST00000617310 IGLC6P0CF74 106 aa7.5□□□□□ -1.21
SMARCA1-205ENST00000617310 DCANP1Q8TF63 244 aa7.5□□□□□ -1.21
SMARCA1-205ENST00000617310 TIRAPP58753 221 aa7.5□□□□□ -1.21
SMARCA1-205ENST00000617310 LINC00526Q96FQ7 95 aa7.5□□□□□ -1.21
SMARCA1-205ENST00000617310 SND1-IT1Q9HBX3 110 aa7.5□□□□□ -1.21
SMARCA1-205ENST00000617310 BSNQ9UPA5 3926 aa7.5□□□□□ -1.21
SMARCA1-205ENST00000617310 NDUFS6O75380 124 aaKnown RBP7.49□□□□□ -1.21
SMARCA1-205ENST00000617310 LINC00467Q9BRT7 94 aa7.49□□□□□ -1.21
SMARCA1-205ENST00000617310 NOTCH1P46531 2555 aa7.49□□□□□ -1.21
SMARCA1-205ENST00000617310 TINCRA0A1B0GVN0 87 aa7.49□□□□□ -1.21
SMARCA1-205ENST00000617310 NDUFA1O15239 70 aa7.49□□□□□ -1.21
SMARCA1-205ENST00000617310 MED14OSP0DP75 135 aa7.49□□□□□ -1.21
SMARCA1-205ENST00000617310 BVES-AS1Q5T3Y7 98 aa7.49□□□□□ -1.21
SMARCA1-205ENST00000617310 COX7B2Q8TF08 81 aa7.49□□□□□ -1.21
SMARCA1-205ENST00000617310 NANOS2P60321 138 aaKnown RBP7.49□□□□□ -1.21
SMARCA1-205ENST00000617310 ETDCA0A1B0GVM5 59 aa7.49□□□□□ -1.21
SMARCA1-205ENST00000617310 MIFP14174 115 aa7.49□□□□□ -1.21
SMARCA1-205ENST00000617310 LYRM9A8MSI8 78 aa7.48□□□□□ -1.21
SMARCA1-205ENST00000617310 NBEAL1Q6ZS30 2694 aa7.48□□□□□ -1.21
SMARCA1-205ENST00000617310 CRYGDP07320 174 aa7.48□□□□□ -1.21
SMARCA1-205ENST00000617310 TM2D2Q9BX73 214 aa7.48□□□□□ -1.21
SMARCA1-205ENST00000617310 GCN1Q92616 2671 aaKnown RBP7.48□□□□□ -1.21
SMARCA1-205ENST00000617310 TRAV12-1A0A0B4J245 112 aa7.48□□□□□ -1.21
SMARCA1-205ENST00000617310 REG3AQ06141 175 aa7.48□□□□□ -1.21
SMARCA1-205ENST00000617310 CFAP126Q5VTH2 177 aa7.48□□□□□ -1.21
SMARCA1-205ENST00000617310 A4D1N5 150 aa7.47□□□□□ -1.21
SMARCA1-205ENST00000617310 SMIM9A6NGZ8 99 aa7.47□□□□□ -1.21
SMARCA1-205ENST00000617310 H3BMG7 143 aa7.47□□□□□ -1.21
SMARCA1-205ENST00000617310 RS1O15537 224 aa7.47□□□□□ -1.21
SMARCA1-205ENST00000617310 COL27A1Q8IZC6 1860 aaPredicted RBP7.47□□□□□ -1.21
SMARCA1-205ENST00000617310 A0A0J9YWU9 116 aa7.47□□□□□ -1.21
SMARCA1-205ENST00000617310 A0A1B0GXF2 115 aa7.47□□□□□ -1.21
SMARCA1-205ENST00000617310 IGLV2-11P01706 119 aa7.47□□□□□ -1.21
SMARCA1-205ENST00000617310 KPRPQ5T749 579 aaPredicted RBP7.47□□□□□ -1.21
SMARCA1-205ENST00000617310 MIR7-3HGQ8N6C7 128 aa7.47□□□□□ -1.21
SMARCA1-205ENST00000617310 NEXN-AS1Q8NBZ9 246 aa7.47□□□□□ -1.21
SMARCA1-205ENST00000617310 GTSF1LQ9H1H1 148 aa7.47□□□□□ -1.21
SMARCA1-205ENST00000617310 NCR3O14931 201 aa7.47□□□□□ -1.21
SMARCA1-205ENST00000617310 RNASE3P12724 160 aaKnown RBP7.47□□□□□ -1.21
SMARCA1-205ENST00000617310 HAMPP81172 84 aa7.47□□□□□ -1.21
SMARCA1-205ENST00000617310 COA6Q5JTJ3 125 aaKnown RBP7.46□□□□□ -1.21
SMARCA1-205ENST00000617310 MUSTN1Q8IVN3 82 aa7.46□□□□□ -1.21
SMARCA1-205ENST00000617310 CEND1Q8N111 149 aa7.46□□□□□ -1.21
SMARCA1-205ENST00000617310 ODF3Q96PU9 254 aa7.46□□□□□ -1.21
SMARCA1-205ENST00000617310 CDKN2A-AS1Q9UH64 79 aa7.46□□□□□ -1.21
SMARCA1-205ENST00000617310 TRAV13-2A0A0B4J235 113 aa7.46□□□□□ -1.22
SMARCA1-205ENST00000617310 LRCOL1A6NCL2 159 aa7.46□□□□□ -1.22
SMARCA1-205ENST00000617310 DLEU1O43261 78 aa7.46□□□□□ -1.22
SMARCA1-205ENST00000617310 LY6G6CO95867 125 aa7.46□□□□□ -1.22
SMARCA1-205ENST00000617310 GAS8-AS1O95177 125 aa7.46□□□□□ -1.22
SMARCA1-205ENST00000617310 LINC01545Q5VT33 79 aa7.46□□□□□ -1.22
SMARCA1-205ENST00000617310 COX11Q9Y6N1 276 aa7.46□□□□□ -1.22
SMARCA1-205ENST00000617310 NDUFA7O95182 113 aa7.45□□□□□ -1.22
SMARCA1-205ENST00000617310 TOMM6Q96B49 74 aa7.45□□□□□ -1.22
SMARCA1-205ENST00000617310 ODF1Q14990 250 aa7.45□□□□□ -1.22
SMARCA1-205ENST00000617310 C12orf74Q32Q52 190 aa7.45□□□□□ -1.22
SMARCA1-205ENST00000617310 IL17DQ8TAD2 202 aa7.45□□□□□ -1.22
SMARCA1-205ENST00000617310 XAGE1AQ9HD64 81 aa7.45□□□□□ -1.22
SMARCA1-205ENST00000617310 CPAMD8Q8IZJ3 1885 aa7.45□□□□□ -1.22
SMARCA1-205ENST00000617310 M0QY20 66 aa7.44□□□□□ -1.22
SMARCA1-205ENST00000617310 CHCHD10Q8WYQ3 142 aaPredicted RBP7.44□□□□□ -1.22
SMARCA1-205ENST00000617310 IGLV1-51P01701 117 aa7.44□□□□□ -1.22
SMARCA1-205ENST00000617310 CLUHP3Q96NS8 147 aa7.44□□□□□ -1.22
SMARCA1-205ENST00000617310 CFC1BP0CG36 223 aa7.44□□□□□ -1.22
SMARCA1-205ENST00000617310 CFC1P0CG37 223 aa7.44□□□□□ -1.22
SMARCA1-205ENST00000617310 CARD19Q96LW7 228 aa7.44□□□□□ -1.22
SMARCA1-205ENST00000617310 A0A096LNI7 61 aa7.44□□□□□ -1.22
SMARCA1-205ENST00000617310 HERV-K104P63124 156 aa7.44□□□□□ -1.22
SMARCA1-205ENST00000617310 TP73-AS1Q9UF72 201 aa7.44□□□□□ -1.22
SMARCA1-205ENST00000617310 PTPRBP23467 1997 aa7.43□□□□□ -1.22
SMARCA1-205ENST00000617310 KLLNB2CW77 178 aa7.43□□□□□ -1.22
SMARCA1-205ENST00000617310 RBX1P62877 108 aa7.43□□□□□ -1.22
SMARCA1-205ENST00000617310 UBE2V1Q13404 147 aa7.43□□□□□ -1.22
SMARCA1-205ENST00000617310 TRBV6-8A0A0A6YYG3 113 aa7.43□□□□□ -1.22
SMARCA1-205ENST00000617310 TRAV10A0A0B4J240 114 aa7.43□□□□□ -1.22
SMARCA1-205ENST00000617310 OVOL2Q9BRP0 275 aa7.43□□□□□ -1.22
SMARCA1-205ENST00000617310 CSMD2Q7Z408 3487 aa7.43□□□□□ -1.22
SMARCA1-205ENST00000617310 SOCS3O14543 225 aa7.43□□□□□ -1.22
SMARCA1-205ENST00000617310 PCP4P48539 62 aa7.43□□□□□ -1.22
SMARCA1-205ENST00000617310 FXYD2P54710 66 aa7.42□□□□□ -1.22
SMARCA1-205ENST00000617310 UBR5O95071 2799 aaPredicted RBP7.42□□□□□ -1.22
SMARCA1-205ENST00000617310 UBE2AP49459 152 aa7.42□□□□□ -1.22
SMARCA1-205ENST00000617310 UNC79Q9P2D8 2635 aa7.42□□□□□ -1.22
SMARCA1-205ENST00000617310 A8MZ25 164 aa7.42□□□□□ -1.22
SMARCA1-205ENST00000617310 HIGD2AQ9BW72 106 aa7.42□□□□□ -1.22
SMARCA1-205ENST00000617310 C9orf118A6NHY6 69 aa7.41□□□□□ -1.22
SMARCA1-205ENST00000617310 RPL32P62910 135 aaKnown RBP7.41□□□□□ -1.22
SMARCA1-205ENST00000617310 IGSF10Q6WRI0 2623 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms