RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 SMAGPQ0VAQ4 97 aa14.36□□□□□ -0.11
CBWD3-212ENST00000616550 C9orf163Q8N9P6 203 aa14.36□□□□□ -0.11
CBWD3-212ENST00000616550 CHAC1Q9BUX1 264 aa14.36□□□□□ -0.11
CBWD3-212ENST00000616550 D6R8Y8 96 aa14.35□□□□□ -0.11
CBWD3-212ENST00000616550 TNFRSF6BO95407 300 aa14.35□□□□□ -0.11
CBWD3-212ENST00000616550 INAFM2P0DMQ5 153 aa14.35□□□□□ -0.11
CBWD3-212ENST00000616550 SCXQ7RTU7 201 aa14.35□□□□□ -0.11
CBWD3-212ENST00000616550 CDC42SE2Q9NRR3 84 aa14.35□□□□□ -0.11
CBWD3-212ENST00000616550 PPBPP02775 128 aa14.34□□□□□ -0.11
CBWD3-212ENST00000616550 RPL32P62910 135 aaKnown RBP14.34□□□□□ -0.11
CBWD3-212ENST00000616550 IFITM2Q01629 132 aa14.34□□□□□ -0.11
CBWD3-212ENST00000616550 LINC00959A0A1B0GUT2 108 aa14.33□□□□□ -0.12
CBWD3-212ENST00000616550 TCAPO15273 167 aa14.33□□□□□ -0.12
CBWD3-212ENST00000616550 CNBPP62633 177 aaKnown RBP14.33□□□□□ -0.12
CBWD3-212ENST00000616550 ZNF664Q8N3J9 261 aa14.33□□□□□ -0.12
CBWD3-212ENST00000616550 TMEM18Q96B42 140 aa14.33□□□□□ -0.12
CBWD3-212ENST00000616550 ABCA13Q86UQ4 5058 aa14.33□□□□□ -0.12
CBWD3-212ENST00000616550 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.32□□□□□ -0.12
CBWD3-212ENST00000616550 SS18Q15532 418 aa14.32□□□□□ -0.12
CBWD3-212ENST00000616550 UQCC3Q6UW78 93 aa14.32□□□□□ -0.12
CBWD3-212ENST00000616550 PHOX2AO14813 284 aa14.31□□□□□ -0.12
CBWD3-212ENST00000616550 XCL1P47992 114 aa14.31□□□□□ -0.12
CBWD3-212ENST00000616550 CSDC2Q9Y534 153 aaKnown RBP14.31□□□□□ -0.12
CBWD3-212ENST00000616550 CCL25O15444 150 aa14.3□□□□□ -0.12
CBWD3-212ENST00000616550 NPYP01303 97 aa14.3□□□□□ -0.12
CBWD3-212ENST00000616550 FOXI1Q12951 378 aa14.3□□□□□ -0.12
CBWD3-212ENST00000616550 ORMDL3Q8N138 153 aa14.3□□□□□ -0.12
CBWD3-212ENST00000616550 LINC00528Q8N1L1 170 aa14.3□□□□□ -0.12
CBWD3-212ENST00000616550 C15orf56Q8N910 161 aa14.3□□□□□ -0.12
CBWD3-212ENST00000616550 CIRBP-AS1Q8TBR5 109 aa14.3□□□□□ -0.12
CBWD3-212ENST00000616550 SMIM2Q9BVW6 85 aa14.3□□□□□ -0.12
CBWD3-212ENST00000616550 UBE2D4Q9Y2X8 147 aa14.3□□□□□ -0.12
CBWD3-212ENST00000616550 PLA2G1BP04054 148 aaKnown RBP14.29□□□□□ -0.12
CBWD3-212ENST00000616550 TMEM136Q6ZRR5 245 aa14.29□□□□□ -0.12
CBWD3-212ENST00000616550 SLPIP03973 132 aa14.28□□□□□ -0.12
CBWD3-212ENST00000616550 SDIM1Q6ZPB5 146 aa14.28□□□□□ -0.12
CBWD3-212ENST00000616550 PRELID3AQ96N28 172 aa14.28□□□□□ -0.12
CBWD3-212ENST00000616550 IGHV3-64A0A075B6Q5 118 aa14.27□□□□□ -0.13
CBWD3-212ENST00000616550 TMEM218A2RU14 115 aa14.27□□□□□ -0.13
CBWD3-212ENST00000616550 HIGD2BQ4VC39 106 aa14.27□□□□□ -0.13
CBWD3-212ENST00000616550 TIMM21Q9BVV7 248 aa14.27□□□□□ -0.13
CBWD3-212ENST00000616550 DNAH8Q96JB1 4490 aa14.26□□□□□ -0.13
CBWD3-212ENST00000616550 CD164L2Q6UWJ8 174 aa14.26□□□□□ -0.13
CBWD3-212ENST00000616550 C1orf196B1AJZ1 125 aa14.25□□□□□ -0.13
CBWD3-212ENST00000616550 GVQW2A0A096LPI5 108 aaPredicted RBP14.24□□□□□ -0.13
CBWD3-212ENST00000616550 ADCYAP1P18509 176 aa14.24□□□□□ -0.13
CBWD3-212ENST00000616550 RAB5AP20339 215 aa14.24□□□□□ -0.13
CBWD3-212ENST00000616550 RNASE13Q5GAN3 156 aaKnown RBP14.24□□□□□ -0.13
CBWD3-212ENST00000616550 IMMP2LQ96T52 175 aa14.24□□□□□ -0.13
CBWD3-212ENST00000616550 IGHV1-58A0A0C4DH39 117 aa14.23□□□□□ -0.13
CBWD3-212ENST00000616550 RPL39P62891 51 aaKnown RBP14.23□□□□□ -0.13
CBWD3-212ENST00000616550 LAMTOR2Q9Y2Q5 125 aa14.23□□□□□ -0.13
CBWD3-212ENST00000616550 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.23□□□□□ -0.13
CBWD3-212ENST00000616550 FAT1Q14517 4588 aa14.23□□□□□ -0.13
CBWD3-212ENST00000616550 TRAV13-1A0A0B4J241 112 aa14.22□□□□□ -0.13
CBWD3-212ENST00000616550 DPH3Q96FX2 82 aa14.22□□□□□ -0.13
CBWD3-212ENST00000616550 Q6ZUT4 128 aa14.21□□□□□ -0.13
CBWD3-212ENST00000616550 COMMD7Q86VX2 200 aa14.21□□□□□ -0.13
CBWD3-212ENST00000616550 SEC11CQ9BY50 192 aa14.21□□□□□ -0.13
CBWD3-212ENST00000616550 CTDSP1Q9GZU7 261 aa14.21□□□□□ -0.13
CBWD3-212ENST00000616550 SPANXA1Q9NS26 97 aa14.21□□□□□ -0.13
CBWD3-212ENST00000616550 MAP1LC3AQ9H492 121 aa14.2□□□□□ -0.14
CBWD3-212ENST00000616550 LOC389332A0A1B0GUA5 103 aa14.19□□□□□ -0.14
CBWD3-212ENST00000616550 PRSS47A8MTI9 375 aa14.19□□□□□ -0.14
CBWD3-212ENST00000616550 MALP21145 153 aa14.19□□□□□ -0.14
CBWD3-212ENST00000616550 PANO1I0J062 215 aa14.18□□□□□ -0.14
CBWD3-212ENST00000616550 COX7A2LO14548 114 aa14.18□□□□□ -0.14
CBWD3-212ENST00000616550 VPS13BQ7Z7G8 4022 aa14.17□□□□□ -0.14
CBWD3-212ENST00000616550 ZNF561-AS1K7EIQ3 104 aa14.17□□□□□ -0.14
CBWD3-212ENST00000616550 SRRM2Q9UQ35 2752 aaKnown RBP14.16□□□□□ -0.14
CBWD3-212ENST00000616550 MRPS36P82909 103 aaKnown RBP14.16□□□□□ -0.14
CBWD3-212ENST00000616550 COX6A2Q02221 97 aa14.16□□□□□ -0.14
CBWD3-212ENST00000616550 CIRBPQ14011 172 aaKnown RBP14.16□□□□□ -0.14
CBWD3-212ENST00000616550 TRAV9-1A0A075B6T8 112 aa14.15□□□□□ -0.14
CBWD3-212ENST00000616550 IFI27P40305 119 aaPredicted RBP14.15□□□□□ -0.14
CBWD3-212ENST00000616550 LINC00526Q96FQ7 95 aa14.15□□□□□ -0.14
CBWD3-212ENST00000616550 OPRPNQ99935 248 aaPredicted RBP14.15□□□□□ -0.14
CBWD3-212ENST00000616550 FLG2Q5D862 2391 aaPredicted RBP14.14□□□□□ -0.15
CBWD3-212ENST00000616550 CHTF8P0CG12 524 aa14.14□□□□□ -0.15
CBWD3-212ENST00000616550 S100PP25815 95 aa14.14□□□□□ -0.15
CBWD3-212ENST00000616550 Q8N8P6 123 aa14.14□□□□□ -0.15
CBWD3-212ENST00000616550 FAM104AQ969W3 186 aa14.14□□□□□ -0.15
CBWD3-212ENST00000616550 C5orf38Q86SI9 138 aa14.13□□□□□ -0.15
CBWD3-212ENST00000616550 PRSS3P2Q8NHM4 247 aa14.13□□□□□ -0.15
CBWD3-212ENST00000616550 CARD19Q96LW7 228 aa14.13□□□□□ -0.15
CBWD3-212ENST00000616550 APOMO95445 188 aa14.12□□□□□ -0.15
CBWD3-212ENST00000616550 SPACA4Q8TDM5 124 aa14.12□□□□□ -0.15
CBWD3-212ENST00000616550 PKIGQ9Y2B9 76 aa14.12□□□□□ -0.15
CBWD3-212ENST00000616550 PYGO1Q9Y3Y4 419 aa14.12□□□□□ -0.15
CBWD3-212ENST00000616550 A0A087WYN8 130 aa14.11□□□□□ -0.15
CBWD3-212ENST00000616550 IFITM10A6NMD0 228 aa14.11□□□□□ -0.15
CBWD3-212ENST00000616550 RPL37AP61513 92 aaKnown RBP14.11□□□□□ -0.15
CBWD3-212ENST00000616550 SYCNQ0VAF6 134 aa14.11□□□□□ -0.15
CBWD3-212ENST00000616550 ORMDL2Q53FV1 153 aa14.1□□□□□ -0.15
CBWD3-212ENST00000616550 NXT2Q9NPJ8 142 aaKnown RBP14.1□□□□□ -0.15
CBWD3-212ENST00000616550 IGLV4-69A0A075B6H9 119 aa14.09□□□□□ -0.15
CBWD3-212ENST00000616550 IGKV2-24A0A0C4DH68 120 aa14.09□□□□□ -0.15
CBWD3-212ENST00000616550 K7EMI3 77 aa14.09□□□□□ -0.15
CBWD3-212ENST00000616550 MAJINQ3KP22 176 aa14.09□□□□□ -0.15
CBWD3-212ENST00000616550 KIAA1644Q3SXP7 199 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms