RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 PPDPFLQ8WWR9 84 aa4.18□□□□□ -1.74
SYNCRIP-204ENST00000616122 GAGE12HA6NDE8 117 aa4.18□□□□□ -1.74
SYNCRIP-204ENST00000616122 LGALS9O00182 355 aa4.18□□□□□ -1.74
SYNCRIP-204ENST00000616122 PRM2P04554 102 aa4.18□□□□□ -1.74
SYNCRIP-204ENST00000616122 SOCS3O14543 225 aa4.18□□□□□ -1.74
SYNCRIP-204ENST00000616122 P0DMU3 169 aa4.18□□□□□ -1.74
SYNCRIP-204ENST00000616122 FAM231AP0DMU4 169 aa4.18□□□□□ -1.74
SYNCRIP-204ENST00000616122 FAM231CP0DMU5 169 aa4.18□□□□□ -1.74
SYNCRIP-204ENST00000616122 DEFB114Q30KQ6 69 aa4.18□□□□□ -1.74
SYNCRIP-204ENST00000616122 ZNF22P17026 224 aaPredicted RBP4.18□□□□□ -1.74
SYNCRIP-204ENST00000616122 Q6ZSV7 163 aa4.18□□□□□ -1.74
SYNCRIP-204ENST00000616122 SLC25A29Q8N8R3 303 aa4.18□□□□□ -1.74
SYNCRIP-204ENST00000616122 PTH2Q96A98 100 aa4.18□□□□□ -1.74
SYNCRIP-204ENST00000616122 CDKN2A-AS1Q9UH64 79 aa4.18□□□□□ -1.74
SYNCRIP-204ENST00000616122 LINC00158P58513 81 aa4.17□□□□□ -1.74
SYNCRIP-204ENST00000616122 C2orf82Q6UX34 121 aa4.17□□□□□ -1.74
SYNCRIP-204ENST00000616122 Q6YL49 198 aa4.17□□□□□ -1.74
SYNCRIP-204ENST00000616122 RNF152Q8N8N0 203 aa4.17□□□□□ -1.74
SYNCRIP-204ENST00000616122 PAX4O43316 350 aa4.17□□□□□ -1.74
SYNCRIP-204ENST00000616122 CFAP161Q6P656 301 aa4.17□□□□□ -1.74
SYNCRIP-204ENST00000616122 NTN5Q8WTR8 489 aaPredicted RBP4.17□□□□□ -1.74
SYNCRIP-204ENST00000616122 SLC25A20O43772 301 aa4.17□□□□□ -1.74
SYNCRIP-204ENST00000616122 TEN1Q86WV5 123 aa4.17□□□□□ -1.74
SYNCRIP-204ENST00000616122 BBC3Q96PG8 261 aaPredicted RBP4.17□□□□□ -1.74
SYNCRIP-204ENST00000616122 Q9H8V8 135 aa4.17□□□□□ -1.74
SYNCRIP-204ENST00000616122 NOP10Q9NPE3 64 aaKnown RBP4.17□□□□□ -1.74
SYNCRIP-204ENST00000616122 IGIPA6NJ69 53 aa4.17□□□□□ -1.74
SYNCRIP-204ENST00000616122 TMEM243Q9BU79 118 aa4.17□□□□□ -1.74
SYNCRIP-204ENST00000616122 J3QKU1 62 aa4.17□□□□□ -1.74
SYNCRIP-204ENST00000616122 GAGE2BQ13066 116 aa4.17□□□□□ -1.74
SYNCRIP-204ENST00000616122 GAGE2EQ4V326 116 aa4.17□□□□□ -1.74
SYNCRIP-204ENST00000616122 Q6ZTI0 123 aa4.17□□□□□ -1.74
SYNCRIP-204ENST00000616122 MUSTN1Q8IVN3 82 aa4.17□□□□□ -1.74
SYNCRIP-204ENST00000616122 MAP6D1Q9H9H5 199 aa4.17□□□□□ -1.74
SYNCRIP-204ENST00000616122 GAGE2DQ9UEU5 116 aa4.17□□□□□ -1.74
SYNCRIP-204ENST00000616122 KIF25-AS1Q9Y6Z4 181 aa4.17□□□□□ -1.74
SYNCRIP-204ENST00000616122 IGLV4-3A0A075B6K6 122 aa4.16□□□□□ -1.74
SYNCRIP-204ENST00000616122 SPTBN5Q9NRC6 3674 aaKnown RBP4.16□□□□□ -1.74
SYNCRIP-204ENST00000616122 IGHV4-31P0DP07 118 aa4.16□□□□□ -1.74
SYNCRIP-204ENST00000616122 C9orf85Q96MD7 179 aa4.16□□□□□ -1.74
SYNCRIP-204ENST00000616122 ZNF580Q9UK33 172 aa4.16□□□□□ -1.74
SYNCRIP-204ENST00000616122 TRBV10-1A0A0K0K1A3 114 aa4.16□□□□□ -1.74
SYNCRIP-204ENST00000616122 TRBV7-3A0A075B6L6 115 aa4.16□□□□□ -1.74
SYNCRIP-204ENST00000616122 SPINK8P0C7L1 97 aa4.16□□□□□ -1.74
SYNCRIP-204ENST00000616122 PROK1P58294 105 aa4.16□□□□□ -1.74
SYNCRIP-204ENST00000616122 LINC00315P59091 139 aa4.16□□□□□ -1.74
SYNCRIP-204ENST00000616122 KLK9Q2XQG4 91 aa4.16□□□□□ -1.74
SYNCRIP-204ENST00000616122 VSIG2Q96IQ7 327 aa4.16□□□□□ -1.74
SYNCRIP-204ENST00000616122 ATXN8Q156A1 80 aa4.16□□□□□ -1.74
SYNCRIP-204ENST00000616122 ODF3L2Q3SX64 289 aa4.16□□□□□ -1.74
SYNCRIP-204ENST00000616122 NDUFA11Q86Y39 141 aa4.16□□□□□ -1.74
SYNCRIP-204ENST00000616122 TRAV25A0A0B4J276 109 aa4.16□□□□□ -1.74
SYNCRIP-204ENST00000616122 GAGE6Q13070 117 aa4.16□□□□□ -1.74
SYNCRIP-204ENST00000616122 TMEM86BQ8N661 226 aa4.16□□□□□ -1.74
SYNCRIP-204ENST00000616122 ZNF702PQ9H963 129 aa4.16□□□□□ -1.74
SYNCRIP-204ENST00000616122 PFN2P35080 140 aa4.15□□□□□ -1.74
SYNCRIP-204ENST00000616122 HERVK_113P63121 156 aa4.15□□□□□ -1.74
SYNCRIP-204ENST00000616122 PRSS47A8MTI9 375 aa4.15□□□□□ -1.74
SYNCRIP-204ENST00000616122 HIST2H2BDQ6DRA6 164 aa4.15□□□□□ -1.74
SYNCRIP-204ENST00000616122 UFSP1Q6NVU6 142 aa4.15□□□□□ -1.74
SYNCRIP-204ENST00000616122 DAND5Q8N907 189 aa4.15□□□□□ -1.74
SYNCRIP-204ENST00000616122 LINC01620Q4KN68 170 aa4.15□□□□□ -1.75
SYNCRIP-204ENST00000616122 NDUFS5O43920 106 aa4.15□□□□□ -1.75
SYNCRIP-204ENST00000616122 CRPP02741 224 aa4.15□□□□□ -1.75
SYNCRIP-204ENST00000616122 Q6ZUT4 128 aa4.15□□□□□ -1.75
SYNCRIP-204ENST00000616122 C5orf38Q86SI9 138 aa4.15□□□□□ -1.75
SYNCRIP-204ENST00000616122 IGHV1-58A0A0C4DH39 117 aa4.14□□□□□ -1.75
SYNCRIP-204ENST00000616122 UBE2D1P51668 147 aa4.14□□□□□ -1.75
SYNCRIP-204ENST00000616122 NANOS2P60321 138 aaKnown RBP4.14□□□□□ -1.75
SYNCRIP-204ENST00000616122 HIST2H2BCQ6DN03 193 aa4.14□□□□□ -1.75
SYNCRIP-204ENST00000616122 C18orf65Q6ZTR6 163 aa4.14□□□□□ -1.75
SYNCRIP-204ENST00000616122 CRYBA4P53673 196 aa4.14□□□□□ -1.75
SYNCRIP-204ENST00000616122 DNAJC9-AS1A6NH13 148 aa4.14□□□□□ -1.75
SYNCRIP-204ENST00000616122 NXPH4O95158 308 aa4.14□□□□□ -1.75
SYNCRIP-204ENST00000616122 DNAJC30Q96LL9 226 aa4.14□□□□□ -1.75
SYNCRIP-204ENST00000616122 LEPROTO15243 131 aa4.14□□□□□ -1.75
SYNCRIP-204ENST00000616122 SEC61GP60059 68 aa4.14□□□□□ -1.75
SYNCRIP-204ENST00000616122 NFE4Q86UQ8 179 aa4.14□□□□□ -1.75
SYNCRIP-204ENST00000616122 LINC01006Q8NI28 216 aa4.14□□□□□ -1.75
SYNCRIP-204ENST00000616122 PYGO1Q9Y3Y4 419 aa4.14□□□□□ -1.75
SYNCRIP-204ENST00000616122 TNRC6BQ9UPQ9 1833 aaKnown RBP4.13□□□□□ -1.75
SYNCRIP-204ENST00000616122 A0A0J9YXY3 114 aa4.13□□□□□ -1.75
SYNCRIP-204ENST00000616122 K7ERS5 55 aa4.13□□□□□ -1.75
SYNCRIP-204ENST00000616122 IGHV3-33P01772 117 aa4.13□□□□□ -1.75
SYNCRIP-204ENST00000616122 A8MZ25 164 aa4.13□□□□□ -1.75
SYNCRIP-204ENST00000616122 LRRC75A-AS1Q8N1F1 130 aa4.13□□□□□ -1.75
SYNCRIP-204ENST00000616122 CSNK1G2-AS1Q8NCQ2 148 aa4.13□□□□□ -1.75
SYNCRIP-204ENST00000616122 FOXI1Q12951 378 aa4.13□□□□□ -1.75
SYNCRIP-204ENST00000616122 LINC00467Q9BRT7 94 aa4.13□□□□□ -1.75
SYNCRIP-204ENST00000616122 CELSR1Q9NYQ6 3014 aa4.13□□□□□ -1.75
SYNCRIP-204ENST00000616122 FAM222AQ5U5X8 452 aa4.13□□□□□ -1.75
SYNCRIP-204ENST00000616122 ZNF843Q8N446 348 aa4.13□□□□□ -1.75
SYNCRIP-204ENST00000616122 CKS1BP61024 79 aa4.12□□□□□ -1.75
SYNCRIP-204ENST00000616122 TMEM263Q8WUH6 116 aaKnown RBP4.12□□□□□ -1.75
SYNCRIP-204ENST00000616122 G3V4G9 280 aa4.12□□□□□ -1.75
SYNCRIP-204ENST00000616122 CFAP126Q5VTH2 177 aa4.12□□□□□ -1.75
SYNCRIP-204ENST00000616122 CDIP1Q9H305 208 aa4.12□□□□□ -1.75
SYNCRIP-204ENST00000616122 A0A096LPF7 62 aa4.12□□□□□ -1.75
SYNCRIP-204ENST00000616122 C4orf3Q8WVX3 66 aa4.12□□□□□ -1.75
SYNCRIP-204ENST00000616122 FAM110AQ9BQ89 295 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms