RNA–Protein interactions for RNA: ENST00000614478.1

GEN1-208, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

Gene GEN1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-208ENST00000614478 PRKDCP78527 4128 aaKnown RBP12.46□□□□□ -0.41
GEN1-208ENST00000614478 IGLV4-3A0A075B6K6 122 aa12.46□□□□□ -0.42
GEN1-208ENST00000614478 E9PLD3 99 aa12.46□□□□□ -0.42
GEN1-208ENST00000614478 BVES-AS1Q5T3Y7 98 aa12.46□□□□□ -0.42
GEN1-208ENST00000614478 NFE4Q86UQ8 179 aa12.46□□□□□ -0.42
GEN1-208ENST00000614478 OPRPNQ99935 248 aaPredicted RBP12.46□□□□□ -0.42
GEN1-208ENST00000614478 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.45□□□□□ -0.42
GEN1-208ENST00000614478 IGKV2-29A2NJV5 120 aaPredicted RBP12.45□□□□□ -0.42
GEN1-208ENST00000614478 HSD52Q0P140 79 aa12.44□□□□□ -0.42
GEN1-208ENST00000614478 AMELXQ99217 191 aa12.44□□□□□ -0.42
GEN1-208ENST00000614478 TIMM21Q9BVV7 248 aa12.44□□□□□ -0.42
GEN1-208ENST00000614478 VCX2Q9H322 139 aa12.44□□□□□ -0.42
GEN1-208ENST00000614478 C11orf86A6NJI1 115 aa12.44□□□□□ -0.42
GEN1-208ENST00000614478 HERVK_113P61574 105 aa12.44□□□□□ -0.42
GEN1-208ENST00000614478 NTM-AS1Q6ZSK4 140 aa12.44□□□□□ -0.42
GEN1-208ENST00000614478 PRO0255Q9UI72 69 aa12.44□□□□□ -0.42
GEN1-208ENST00000614478 TCTAP57738 103 aa12.43□□□□□ -0.42
GEN1-208ENST00000614478 B9D2Q9BPU9 175 aa12.43□□□□□ -0.42
GEN1-208ENST00000614478 CEMP1Q6PRD7 247 aaPredicted RBP12.42□□□□□ -0.42
GEN1-208ENST00000614478 UBE2D4Q9Y2X8 147 aa12.42□□□□□ -0.42
GEN1-208ENST00000614478 LINC00694P0DN24 101 aa12.42□□□□□ -0.42
GEN1-208ENST00000614478 SEC11AP67812 179 aa12.42□□□□□ -0.42
GEN1-208ENST00000614478 SMAGPQ0VAQ4 97 aa12.42□□□□□ -0.42
GEN1-208ENST00000614478 GTSF1LQ9H1H1 148 aa12.42□□□□□ -0.42
GEN1-208ENST00000614478 ATP5G1P05496 136 aa12.41□□□□□ -0.42
GEN1-208ENST00000614478 GYPEP15421 78 aa12.41□□□□□ -0.42
GEN1-208ENST00000614478 MRPS36P82909 103 aaKnown RBP12.41□□□□□ -0.42
GEN1-208ENST00000614478 TRBV25-1A0A075B6N4 114 aa12.4□□□□□ -0.42
GEN1-208ENST00000614478 FAM104AQ969W3 186 aa12.4□□□□□ -0.42
GEN1-208ENST00000614478 COL7A1Q02388 2944 aa12.4□□□□□ -0.42
GEN1-208ENST00000614478 TEX48A0A1B0GUV7 120 aa12.4□□□□□ -0.42
GEN1-208ENST00000614478 PAX4O43316 350 aa12.4□□□□□ -0.42
GEN1-208ENST00000614478 SBSPONQ8IVN8 264 aa12.4□□□□□ -0.42
GEN1-208ENST00000614478 TRAV8-6A0A0B4J262 113 aa12.39□□□□□ -0.43
GEN1-208ENST00000614478 TAL2Q16559 108 aa12.39□□□□□ -0.43
GEN1-208ENST00000614478 MYMXA0A1B0GTQ4 84 aa12.38□□□□□ -0.43
GEN1-208ENST00000614478 MAPKAPK5-AS1Q8N8E1 139 aa12.38□□□□□ -0.43
GEN1-208ENST00000614478 ORAOV1Q8WV07 137 aa12.38□□□□□ -0.43
GEN1-208ENST00000614478 CHAC1Q9BUX1 264 aa12.38□□□□□ -0.43
GEN1-208ENST00000614478 CSDC2Q9Y534 153 aaKnown RBP12.38□□□□□ -0.43
GEN1-208ENST00000614478 F5H768 121 aa12.38□□□□□ -0.43
GEN1-208ENST00000614478 TTTY13Q9BZ97 58 aa12.38□□□□□ -0.43
GEN1-208ENST00000614478 A0A0J9YY99 117 aa12.37□□□□□ -0.43
GEN1-208ENST00000614478 ATP6V0E2Q8NHE4 81 aa12.37□□□□□ -0.43
GEN1-208ENST00000614478 VSIG2Q96IQ7 327 aa12.37□□□□□ -0.43
GEN1-208ENST00000614478 TMEM243Q9BU79 118 aa12.37□□□□□ -0.43
GEN1-208ENST00000614478 H7C423 109 aa12.36□□□□□ -0.43
GEN1-208ENST00000614478 HTN3P15516 51 aa12.36□□□□□ -0.43
GEN1-208ENST00000614478 C12orf74Q32Q52 190 aa12.36□□□□□ -0.43
GEN1-208ENST00000614478 RNASE13Q5GAN3 156 aaKnown RBP12.36□□□□□ -0.43
GEN1-208ENST00000614478 TMEM170BQ5T4T1 132 aa12.36□□□□□ -0.43
GEN1-208ENST00000614478 Q6ZUT4 128 aa12.36□□□□□ -0.43
GEN1-208ENST00000614478 TM2D3Q9BRN9 247 aa12.36□□□□□ -0.43
GEN1-208ENST00000614478 C11orf68Q9H3H3 251 aaKnown RBP12.36□□□□□ -0.43
GEN1-208ENST00000614478 TRBV6-8A0A0A6YYG3 113 aa12.36□□□□□ -0.43
GEN1-208ENST00000614478 DGAT2L7PQ6IED9 249 aa12.36□□□□□ -0.43
GEN1-208ENST00000614478 TENM3Q9P273 2699 aa12.36□□□□□ -0.43
GEN1-208ENST00000614478 TGP01266 2768 aa12.35□□□□□ -0.43
GEN1-208ENST00000614478 TMEM223A0PJW6 202 aa12.35□□□□□ -0.43
GEN1-208ENST00000614478 A6NDN8 102 aa12.35□□□□□ -0.43
GEN1-208ENST00000614478 NHLRC4P0CG21 123 aaPredicted RBP12.35□□□□□ -0.43
GEN1-208ENST00000614478 SPATA25Q9BR10 227 aa12.35□□□□□ -0.43
GEN1-208ENST00000614478 TRAV26-1A0A087WT03 109 aa12.34□□□□□ -0.43
GEN1-208ENST00000614478 A0A0J9YXV3 536 aa12.34□□□□□ -0.43
GEN1-208ENST00000614478 TINCRA0A1B0GVN0 87 aa12.34□□□□□ -0.43
GEN1-208ENST00000614478 UBE2L6O14933 153 aa12.34□□□□□ -0.43
GEN1-208ENST00000614478 ZNF22P17026 224 aaPredicted RBP12.34□□□□□ -0.43
GEN1-208ENST00000614478 A0A0J9YWU9 116 aa12.34□□□□□ -0.43
GEN1-208ENST00000614478 COX11Q9Y6N1 276 aa12.34□□□□□ -0.43
GEN1-208ENST00000614478 A0A096LPF7 62 aa12.33□□□□□ -0.44
GEN1-208ENST00000614478 LEPROTO15243 131 aa12.33□□□□□ -0.44
GEN1-208ENST00000614478 ZNF25P17030 456 aaPredicted RBP12.33□□□□□ -0.44
GEN1-208ENST00000614478 TM2D2Q9BX73 214 aa12.33□□□□□ -0.44
GEN1-208ENST00000614478 AMMECR1LQ6DCA0 310 aa12.32□□□□□ -0.44
GEN1-208ENST00000614478 ZNF815PA8K554 130 aa12.31□□□□□ -0.44
GEN1-208ENST00000614478 TAX1BP3O14907 124 aa12.31□□□□□ -0.44
GEN1-208ENST00000614478 FAM19A3Q7Z5A8 133 aa12.31□□□□□ -0.44
GEN1-208ENST00000614478 PLEKHB2Q96CS7 222 aa12.31□□□□□ -0.44
GEN1-208ENST00000614478 DNAH9Q9NYC9 4486 aa12.31□□□□□ -0.44
GEN1-208ENST00000614478 TIRAPP58753 221 aa12.31□□□□□ -0.44
GEN1-208ENST00000614478 GAGE6Q13070 117 aa12.31□□□□□ -0.44
GEN1-208ENST00000614478 CEND1Q8N111 149 aa12.3□□□□□ -0.44
GEN1-208ENST00000614478 OR5A1Q8NGJ0 315 aa12.3□□□□□ -0.44
GEN1-208ENST00000614478 CHCHD5Q9BSY4 110 aa12.3□□□□□ -0.44
GEN1-208ENST00000614478 STAB2Q8WWQ8 2551 aa12.3□□□□□ -0.44
GEN1-208ENST00000614478 J3QQQ9 107 aa12.29□□□□□ -0.44
GEN1-208ENST00000614478 UBE2D1P51668 147 aa12.29□□□□□ -0.44
GEN1-208ENST00000614478 TMEM101Q96IK0 257 aa12.29□□□□□ -0.44
GEN1-208ENST00000614478 H3BRM9 83 aa12.29□□□□□ -0.44
GEN1-208ENST00000614478 LGALS3P17931 250 aaKnown RBP12.29□□□□□ -0.44
GEN1-208ENST00000614478 Q6ZTC4 211 aa12.29□□□□□ -0.44
GEN1-208ENST00000614478 CDC42SE2Q9NRR3 84 aa12.29□□□□□ -0.44
GEN1-208ENST00000614478 MRPL23Q16540 153 aaKnown RBP12.28□□□□□ -0.44
GEN1-208ENST00000614478 IGLV5-45A0A087WSX0 123 aa12.27□□□□□ -0.44
GEN1-208ENST00000614478 ICOSQ9Y6W8 199 aa12.27□□□□□ -0.44
GEN1-208ENST00000614478 GCSHP23434 173 aa12.27□□□□□ -0.45
GEN1-208ENST00000614478 C11orf45Q8TAV5 145 aa12.27□□□□□ -0.45
GEN1-208ENST00000614478 HIST1H4GQ99525 98 aa12.27□□□□□ -0.45
GEN1-208ENST00000614478 NANOS2P60321 138 aaKnown RBP12.26□□□□□ -0.45
GEN1-208ENST00000614478 SCGB1D4Q6XE38 83 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms