RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 TRAV25A0A0B4J276 109 aa10.78□□□□□ -0.68
VPS36-207ENST00000611132 F5H768 121 aa10.78□□□□□ -0.68
VPS36-207ENST00000611132 DAD1P61803 113 aa10.78□□□□□ -0.68
VPS36-207ENST00000611132 ZNF580Q9UK33 172 aa10.77□□□□□ -0.68
VPS36-207ENST00000611132 TRAV23DV6A0A075B6W5 121 aa10.77□□□□□ -0.69
VPS36-207ENST00000611132 GYPEP15421 78 aa10.77□□□□□ -0.69
VPS36-207ENST00000611132 Q6ZSV7 163 aa10.77□□□□□ -0.69
VPS36-207ENST00000611132 Q6ZTI0 123 aa10.77□□□□□ -0.69
VPS36-207ENST00000611132 ADAMTSL4-AS1Q5T5F5 129 aa10.76□□□□□ -0.69
VPS36-207ENST00000611132 FAM222AQ5U5X8 452 aa10.76□□□□□ -0.69
VPS36-207ENST00000611132 C5orf47Q569G3 176 aa10.75□□□□□ -0.69
VPS36-207ENST00000611132 IGLV10-54A0A075B6I4 117 aa10.75□□□□□ -0.69
VPS36-207ENST00000611132 CXCL5P42830 114 aa10.75□□□□□ -0.69
VPS36-207ENST00000611132 TMEM258P61165 79 aa10.75□□□□□ -0.69
VPS36-207ENST00000611132 RPL18AQ02543 176 aaKnown RBP10.75□□□□□ -0.69
VPS36-207ENST00000611132 C10orf99Q6UWK7 81 aa10.74□□□□□ -0.69
VPS36-207ENST00000611132 SERP2Q8N6R1 65 aa10.74□□□□□ -0.69
VPS36-207ENST00000611132 NCR3O14931 201 aa10.74□□□□□ -0.69
VPS36-207ENST00000611132 C20orf197Q8N268 126 aa10.74□□□□□ -0.69
VPS36-207ENST00000611132 IBA57-AS1B1ANH7 110 aa10.74□□□□□ -0.69
VPS36-207ENST00000611132 SLPIP03973 132 aa10.74□□□□□ -0.69
VPS36-207ENST00000611132 Q96MF0 132 aa10.74□□□□□ -0.69
VPS36-207ENST00000611132 KIF25-AS1Q9Y6Z4 181 aa10.74□□□□□ -0.69
VPS36-207ENST00000611132 IGLV1-40P01703 118 aa10.73□□□□□ -0.69
VPS36-207ENST00000611132 CEP295Q9C0D2 2601 aa10.73□□□□□ -0.69
VPS36-207ENST00000611132 AMELXQ99217 191 aa10.73□□□□□ -0.69
VPS36-207ENST00000611132 USP17L23D6RBM5 183 aa10.72□□□□□ -0.69
VPS36-207ENST00000611132 ATP5EP2Q5VTU8 51 aa10.72□□□□□ -0.69
VPS36-207ENST00000611132 NAV2Q8IVL1 2488 aa10.72□□□□□ -0.69
VPS36-207ENST00000611132 LINC00694P0DN24 101 aa10.72□□□□□ -0.69
VPS36-207ENST00000611132 C4orf3Q8WVX3 66 aa10.72□□□□□ -0.69
VPS36-207ENST00000611132 C1orf43Q9BWL3 253 aa10.72□□□□□ -0.69
VPS36-207ENST00000611132 FAM110AQ9BQ89 295 aa10.71□□□□□ -0.69
VPS36-207ENST00000611132 PRM2P04554 102 aa10.71□□□□□ -0.69
VPS36-207ENST00000611132 UPK3BQ9BT76 320 aa10.71□□□□□ -0.69
VPS36-207ENST00000611132 EDN2P20800 178 aa10.7□□□□□ -0.7
VPS36-207ENST00000611132 SBSPONQ8IVN8 264 aa10.7□□□□□ -0.7
VPS36-207ENST00000611132 H3BQ85 93 aa10.7□□□□□ -0.7
VPS36-207ENST00000611132 LINC00242Q5T6M2 205 aa10.7□□□□□ -0.7
VPS36-207ENST00000611132 MRAPQ8TCY5 172 aa10.7□□□□□ -0.7
VPS36-207ENST00000611132 NRGNQ92686 78 aa10.7□□□□□ -0.7
VPS36-207ENST00000611132 LRRC75A-AS1Q8N1F1 130 aa10.69□□□□□ -0.7
VPS36-207ENST00000611132 NKAPP1Q8N9T2 125 aa10.69□□□□□ -0.7
VPS36-207ENST00000611132 LINC00526Q96FQ7 95 aa10.69□□□□□ -0.7
VPS36-207ENST00000611132 F8WEM9 126 aa10.69□□□□□ -0.7
VPS36-207ENST00000611132 DEFB114Q30KQ6 69 aa10.69□□□□□ -0.7
VPS36-207ENST00000611132 PDE6GP18545 87 aa10.69□□□□□ -0.7
VPS36-207ENST00000611132 LINC00315P59091 139 aa10.68□□□□□ -0.7
VPS36-207ENST00000611132 SMIM11BQ8TCY0 68 aa10.68□□□□□ -0.7
VPS36-207ENST00000611132 CCDC168Q8NDH2 2452 aa10.68□□□□□ -0.7
VPS36-207ENST00000611132 CDSNQ15517 529 aa10.68□□□□□ -0.7
VPS36-207ENST00000611132 ENHOQ6UWT2 76 aa10.68□□□□□ -0.7
VPS36-207ENST00000611132 USP9XQ93008 2570 aaPredicted RBP10.68□□□□□ -0.7
VPS36-207ENST00000611132 C19orf84I3L1E1 186 aa10.67□□□□□ -0.7
VPS36-207ENST00000611132 CHCHD7Q9BUK0 85 aa10.67□□□□□ -0.7
VPS36-207ENST00000611132 PCSK5Q92824 1860 aa10.67□□□□□ -0.7
VPS36-207ENST00000611132 FAM236DA0A1B0GTK5 79 aa10.66□□□□□ -0.7
VPS36-207ENST00000611132 FAM236CP0DP71 79 aa10.66□□□□□ -0.7
VPS36-207ENST00000611132 SMIM1B2RUZ4 78 aa10.66□□□□□ -0.7
VPS36-207ENST00000611132 Q6JHZ5 121 aa10.66□□□□□ -0.7
VPS36-207ENST00000611132 USP9YO00507 2555 aaPredicted RBP10.66□□□□□ -0.7
VPS36-207ENST00000611132 NOTCH2Q04721 2471 aa10.65□□□□□ -0.7
VPS36-207ENST00000611132 TRBV7-7A0A0K0K1E9 115 aa10.65□□□□□ -0.7
VPS36-207ENST00000611132 SPAG11BQ08648 103 aa10.65□□□□□ -0.7
VPS36-207ENST00000611132 NDUFC2O95298 119 aa10.65□□□□□ -0.7
VPS36-207ENST00000611132 DPH3Q96FX2 82 aa10.65□□□□□ -0.71
VPS36-207ENST00000611132 SONP18583 2426 aaKnown RBP10.65□□□□□ -0.71
VPS36-207ENST00000611132 CDC42SE2Q9NRR3 84 aa10.64□□□□□ -0.71
VPS36-207ENST00000611132 NCOR2Q9Y618 2525 aa10.64□□□□□ -0.71
VPS36-207ENST00000611132 ANKRD11Q6UB99 2663 aaPredicted RBP10.64□□□□□ -0.71
VPS36-207ENST00000611132 BRI3O95415 125 aa10.64□□□□□ -0.71
VPS36-207ENST00000611132 APOC4P55056 127 aa10.64□□□□□ -0.71
VPS36-207ENST00000611132 NREPQ16612 68 aa10.64□□□□□ -0.71
VPS36-207ENST00000611132 DIRC1Q969H9 104 aa10.64□□□□□ -0.71
VPS36-207ENST00000611132 TRBV6-8A0A0A6YYG3 113 aa10.64□□□□□ -0.71
VPS36-207ENST00000611132 PRB1P04280 392 aa10.64□□□□□ -0.71
VPS36-207ENST00000611132 RPL28P46779 137 aaKnown RBP10.64□□□□□ -0.71
VPS36-207ENST00000611132 COX6A2Q02221 97 aa10.63□□□□□ -0.71
VPS36-207ENST00000611132 TLN2Q9Y4G6 2542 aa10.63□□□□□ -0.71
VPS36-207ENST00000611132 CCL18P55774 89 aa10.63□□□□□ -0.71
VPS36-207ENST00000611132 CHD9Q3L8U1 2897 aa10.63□□□□□ -0.71
VPS36-207ENST00000611132 TRBV6-4A0A1B0GX49 114 aa10.62□□□□□ -0.71
VPS36-207ENST00000611132 PRO0255Q9UI72 69 aa10.62□□□□□ -0.71
VPS36-207ENST00000611132 MYO18BQ8IUG5 2567 aa10.62□□□□□ -0.71
VPS36-207ENST00000611132 HIVEP3Q5T1R4 2406 aa10.62□□□□□ -0.71
VPS36-207ENST00000611132 ESM1Q9NQ30 184 aa10.62□□□□□ -0.71
VPS36-207ENST00000611132 CAMK2N2Q96S95 79 aa10.62□□□□□ -0.71
VPS36-207ENST00000611132 Q6YL49 198 aa10.61□□□□□ -0.71
VPS36-207ENST00000611132 DEFB105AQ8NG35 78 aa10.61□□□□□ -0.71
VPS36-207ENST00000611132 FUSP35637 526 aaKnown RBP eCLIP10.61□□□□□ -0.71
VPS36-207ENST00000611132 C6orf99Q4VX62 202 aa10.61□□□□□ -0.71
VPS36-207ENST00000611132 SETD2Q9BYW2 2564 aaPredicted RBP10.61□□□□□ -0.71
VPS36-207ENST00000611132 PRORYQ9H606 182 aa10.61□□□□□ -0.71
VPS36-207ENST00000611132 FAM19A4Q96LR4 140 aa10.6□□□□□ -0.71
VPS36-207ENST00000611132 KLK5Q9Y337 293 aaPredicted RBP10.59□□□□□ -0.71
VPS36-207ENST00000611132 A0A087WVE0 104 aa10.59□□□□□ -0.71
VPS36-207ENST00000611132 LINC00269Q8N2A0 174 aa10.59□□□□□ -0.71
VPS36-207ENST00000611132 SMIM9A6NGZ8 99 aa10.58□□□□□ -0.72
VPS36-207ENST00000611132 SHISA2Q6UWI4 295 aa10.58□□□□□ -0.72
VPS36-207ENST00000611132 CITED2Q99967 270 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 160.6 ms