RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 NOTCH3Q9UM47 2321 aa8.53□□□□□ -1.04
USP6NL-206ENST00000609853 GAGE12BA1L429 117 aa8.52□□□□□ -1.05
USP6NL-206ENST00000609853 H7C423 109 aa8.52□□□□□ -1.05
USP6NL-206ENST00000609853 GAGE7O76087 117 aa8.52□□□□□ -1.05
USP6NL-206ENST00000609853 GAGE12FP0CL80 117 aa8.52□□□□□ -1.05
USP6NL-206ENST00000609853 GAGE12GP0CL81 117 aa8.52□□□□□ -1.05
USP6NL-206ENST00000609853 GAGE12IP0CL82 117 aa8.52□□□□□ -1.05
USP6NL-206ENST00000609853 TIRAPP58753 221 aa8.52□□□□□ -1.05
USP6NL-206ENST00000609853 TSPEAR-AS2P59090 65 aa8.52□□□□□ -1.05
USP6NL-206ENST00000609853 KIR2DL5BQ8NHK3 375 aa8.52□□□□□ -1.05
USP6NL-206ENST00000609853 CITED1Q99966 193 aa8.52□□□□□ -1.05
USP6NL-206ENST00000609853 FN1P02751 2386 aaKnown RBP8.52□□□□□ -1.05
USP6NL-206ENST00000609853 LCE2BO14633 110 aa8.51□□□□□ -1.05
USP6NL-206ENST00000609853 CEMP1Q6PRD7 247 aaPredicted RBP8.51□□□□□ -1.05
USP6NL-206ENST00000609853 IGHV1-58A0A0C4DH39 117 aa8.51□□□□□ -1.05
USP6NL-206ENST00000609853 IGLL5B9A064 214 aa8.51□□□□□ -1.05
USP6NL-206ENST00000609853 UBE2D1P51668 147 aa8.51□□□□□ -1.05
USP6NL-206ENST00000609853 Q6ZUT4 128 aa8.51□□□□□ -1.05
USP6NL-206ENST00000609853 FAM19A3Q7Z5A8 133 aa8.51□□□□□ -1.05
USP6NL-206ENST00000609853 GEMIN7Q9H840 131 aaKnown RBP8.51□□□□□ -1.05
USP6NL-206ENST00000609853 SPCS1Q9Y6A9 102 aa8.51□□□□□ -1.05
USP6NL-206ENST00000609853 IGLV5-45A0A087WSX0 123 aa8.5□□□□□ -1.05
USP6NL-206ENST00000609853 TRGV4A0A0C4DH28 118 aa8.5□□□□□ -1.05
USP6NL-206ENST00000609853 K7ERJ3 54 aa8.5□□□□□ -1.05
USP6NL-206ENST00000609853 IGHV3-30-3P0DP02 117 aa8.5□□□□□ -1.05
USP6NL-206ENST00000609853 SBSPONQ8IVN8 264 aa8.5□□□□□ -1.05
USP6NL-206ENST00000609853 LINC00612Q8N6U2 182 aa8.5□□□□□ -1.05
USP6NL-206ENST00000609853 GAGE12JA6NER3 117 aa8.49□□□□□ -1.05
USP6NL-206ENST00000609853 TMEM238C9JI98 176 aa8.49□□□□□ -1.05
USP6NL-206ENST00000609853 IGHV3-30P01768 117 aa8.49□□□□□ -1.05
USP6NL-206ENST00000609853 IGHV3-30-5P0DP03 117 aa8.49□□□□□ -1.05
USP6NL-206ENST00000609853 HERVK_113P63121 156 aa8.49□□□□□ -1.05
USP6NL-206ENST00000609853 GAGE4Q13068 117 aa8.49□□□□□ -1.05
USP6NL-206ENST00000609853 GAGE5Q13069 117 aa8.49□□□□□ -1.05
USP6NL-206ENST00000609853 GAGE13Q4V321 117 aa8.49□□□□□ -1.05
USP6NL-206ENST00000609853 HIVEP1P15822 2718 aa8.49□□□□□ -1.05
USP6NL-206ENST00000609853 NTM-AS1Q6ZSK4 140 aa8.49□□□□□ -1.05
USP6NL-206ENST00000609853 VSIG2Q96IQ7 327 aa8.49□□□□□ -1.05
USP6NL-206ENST00000609853 TMEM243Q9BU79 118 aa8.49□□□□□ -1.05
USP6NL-206ENST00000609853 UBE2L6O14933 153 aa8.48□□□□□ -1.05
USP6NL-206ENST00000609853 APOC4P55056 127 aa8.48□□□□□ -1.05
USP6NL-206ENST00000609853 FHL2Q14192 279 aa8.48□□□□□ -1.05
USP6NL-206ENST00000609853 TMEM101Q96IK0 257 aa8.48□□□□□ -1.05
USP6NL-206ENST00000609853 RNASE13Q5GAN3 156 aaKnown RBP8.47□□□□□ -1.05
USP6NL-206ENST00000609853 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.47□□□□□ -1.05
USP6NL-206ENST00000609853 WFDC9Q8NEX5 89 aa8.47□□□□□ -1.05
USP6NL-206ENST00000609853 NAA38Q9BRA0 125 aaKnown RBP8.47□□□□□ -1.05
USP6NL-206ENST00000609853 WIPF1O43516 503 aa8.46□□□□□ -1.05
USP6NL-206ENST00000609853 RPL24P83731 157 aaKnown RBP8.46□□□□□ -1.05
USP6NL-206ENST00000609853 CDC42SE2Q9NRR3 84 aa8.46□□□□□ -1.05
USP6NL-206ENST00000609853 IGHV3-64A0A075B6Q5 118 aa8.46□□□□□ -1.06
USP6NL-206ENST00000609853 A0A0J9YXY3 114 aa8.46□□□□□ -1.06
USP6NL-206ENST00000609853 LYRM9A8MSI8 78 aa8.46□□□□□ -1.06
USP6NL-206ENST00000609853 LINC00694P0DN24 101 aa8.46□□□□□ -1.06
USP6NL-206ENST00000609853 LYRM7Q5U5X0 104 aa8.46□□□□□ -1.06
USP6NL-206ENST00000609853 ZFAND6Q6FIF0 208 aa8.46□□□□□ -1.06
USP6NL-206ENST00000609853 NDUFA12Q9UI09 145 aa8.46□□□□□ -1.06
USP6NL-206ENST00000609853 X6R8D5 127 aa8.46□□□□□ -1.06
USP6NL-206ENST00000609853 F8P00451 2351 aa8.45□□□□□ -1.06
USP6NL-206ENST00000609853 TIMM17BO60830 172 aa8.45□□□□□ -1.06
USP6NL-206ENST00000609853 LINC00242Q5T6M2 205 aa8.45□□□□□ -1.06
USP6NL-206ENST00000609853 C10orf126Q8N4M7 172 aa8.45□□□□□ -1.06
USP6NL-206ENST00000609853 TRAV8-3A0A0A6YYJ7 113 aa8.44□□□□□ -1.06
USP6NL-206ENST00000609853 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.44□□□□□ -1.06
USP6NL-206ENST00000609853 PGPEP1Q9NXJ5 209 aa8.44□□□□□ -1.06
USP6NL-206ENST00000609853 CDKN2A-AS1Q9UH64 79 aa8.44□□□□□ -1.06
USP6NL-206ENST00000609853 TRBV6-8A0A0A6YYG3 113 aa8.43□□□□□ -1.06
USP6NL-206ENST00000609853 IGLV5-39A0A0G2JS06 123 aa8.43□□□□□ -1.06
USP6NL-206ENST00000609853 SPINK8P0C7L1 97 aa8.43□□□□□ -1.06
USP6NL-206ENST00000609853 SPANXDQ9BXN6 97 aa8.43□□□□□ -1.06
USP6NL-206ENST00000609853 SPANXCQ9NY87 97 aa8.43□□□□□ -1.06
USP6NL-206ENST00000609853 VWFP04275 2813 aa8.43□□□□□ -1.06
USP6NL-206ENST00000609853 NDUFA1O15239 70 aa8.43□□□□□ -1.06
USP6NL-206ENST00000609853 DEFB130BP0DP73 79 aa8.43□□□□□ -1.06
USP6NL-206ENST00000609853 DEFB130AP0DP74 79 aa8.43□□□□□ -1.06
USP6NL-206ENST00000609853 RNF183Q96D59 192 aa8.43□□□□□ -1.06
USP6NL-206ENST00000609853 A0A0B4J2C4 111 aa8.42□□□□□ -1.06
USP6NL-206ENST00000609853 LOC100131303A0A0U1RQF7 123 aa8.42□□□□□ -1.06
USP6NL-206ENST00000609853 F8W1H4 67 aa8.42□□□□□ -1.06
USP6NL-206ENST00000609853 APOMO95445 188 aa8.42□□□□□ -1.06
USP6NL-206ENST00000609853 CFC1BP0CG36 223 aa8.42□□□□□ -1.06
USP6NL-206ENST00000609853 CFC1P0CG37 223 aa8.42□□□□□ -1.06
USP6NL-206ENST00000609853 PRO1854Q9UHT4 67 aa8.42□□□□□ -1.06
USP6NL-206ENST00000609853 PRO0255Q9UI72 69 aa8.42□□□□□ -1.06
USP6NL-206ENST00000609853 K7ERU9 68 aa8.41□□□□□ -1.06
USP6NL-206ENST00000609853 CIRBPQ14011 172 aaKnown RBP8.41□□□□□ -1.06
USP6NL-206ENST00000609853 OCIAD2Q56VL3 154 aa8.41□□□□□ -1.06
USP6NL-206ENST00000609853 SPATA3Q8NHX4 192 aa8.41□□□□□ -1.06
USP6NL-206ENST00000609853 LITAFQ99732 161 aa8.41□□□□□ -1.06
USP6NL-206ENST00000609853 TENM1Q9UKZ4 2725 aa8.41□□□□□ -1.06
USP6NL-206ENST00000609853 TRAV13-1A0A0B4J241 112 aa8.4□□□□□ -1.06
USP6NL-206ENST00000609853 A4D1N5 150 aa8.4□□□□□ -1.06
USP6NL-206ENST00000609853 TSPAN13O95857 204 aa8.4□□□□□ -1.06
USP6NL-206ENST00000609853 IFITM1P13164 125 aa8.4□□□□□ -1.06
USP6NL-206ENST00000609853 MIFP14174 115 aa8.4□□□□□ -1.06
USP6NL-206ENST00000609853 COX6A2Q02221 97 aa8.4□□□□□ -1.06
USP6NL-206ENST00000609853 MUSTN1Q8IVN3 82 aa8.4□□□□□ -1.06
USP6NL-206ENST00000609853 ATRQ13535 2644 aa8.4□□□□□ -1.06
USP6NL-206ENST00000609853 MIAQ16674 131 aa8.4□□□□□ -1.07
USP6NL-206ENST00000609853 ATP6V0E2Q8NHE4 81 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms