RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 CARHSP1Q9Y2V2 147 aaKnown RBP7.93□□□□□ -1.14
CTSA-210ENST00000606000 APOC3P02656 99 aa7.92□□□□□ -1.14
CTSA-210ENST00000606000 SLPIP03973 132 aa7.92□□□□□ -1.14
CTSA-210ENST00000606000 MRPL51Q4U2R6 128 aaKnown RBP7.92□□□□□ -1.14
CTSA-210ENST00000606000 C15orf56Q8N910 161 aa7.92□□□□□ -1.14
CTSA-210ENST00000606000 ANAPC16Q96DE5 110 aa7.92□□□□□ -1.14
CTSA-210ENST00000606000 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.92□□□□□ -1.14
CTSA-210ENST00000606000 TRBV27A0A0K0K1C4 114 aa7.91□□□□□ -1.14
CTSA-210ENST00000606000 H7C423 109 aa7.91□□□□□ -1.14
CTSA-210ENST00000606000 FAM104BQ5XKR9 115 aa7.91□□□□□ -1.14
CTSA-210ENST00000606000 C9orf163Q8N9P6 203 aa7.91□□□□□ -1.14
CTSA-210ENST00000606000 CLRN3Q8NCR9 226 aa7.91□□□□□ -1.14
CTSA-210ENST00000606000 CHCHD10Q8WYQ3 142 aaPredicted RBP7.91□□□□□ -1.14
CTSA-210ENST00000606000 VPS13BQ7Z7G8 4022 aa7.9□□□□□ -1.14
CTSA-210ENST00000606000 C7orf77A4D0Y5 90 aa7.9□□□□□ -1.14
CTSA-210ENST00000606000 SUMO2P61956 95 aaKnown RBP7.9□□□□□ -1.14
CTSA-210ENST00000606000 HIGD2BQ4VC39 106 aa7.9□□□□□ -1.14
CTSA-210ENST00000606000 DGAT2L7PQ6IED9 249 aa7.9□□□□□ -1.14
CTSA-210ENST00000606000 A0A1B0GXF2 115 aa7.89□□□□□ -1.15
CTSA-210ENST00000606000 ZNF25P17030 456 aaPredicted RBP7.89□□□□□ -1.15
CTSA-210ENST00000606000 KRTAP10-4P60372 401 aaPredicted RBP7.89□□□□□ -1.15
CTSA-210ENST00000606000 CNBPP62633 177 aaKnown RBP7.89□□□□□ -1.15
CTSA-210ENST00000606000 FOXI1Q12951 378 aa7.89□□□□□ -1.15
CTSA-210ENST00000606000 C4orf48Q5BLP8 95 aa7.89□□□□□ -1.15
CTSA-210ENST00000606000 OR5A1Q8NGJ0 315 aa7.89□□□□□ -1.15
CTSA-210ENST00000606000 BTF3L4Q96K17 158 aa7.89□□□□□ -1.15
CTSA-210ENST00000606000 RPS10P5Q9NQ39 176 aa7.89□□□□□ -1.15
CTSA-210ENST00000606000 LINC00959A0A1B0GUT2 108 aa7.88□□□□□ -1.15
CTSA-210ENST00000606000 CCL25O15444 150 aa7.88□□□□□ -1.15
CTSA-210ENST00000606000 PLA2G1BP04054 148 aaKnown RBP7.88□□□□□ -1.15
CTSA-210ENST00000606000 CHTF8P0CG12 524 aa7.88□□□□□ -1.15
CTSA-210ENST00000606000 FCER1GP30273 86 aa7.88□□□□□ -1.15
CTSA-210ENST00000606000 XCL1P47992 114 aa7.88□□□□□ -1.15
CTSA-210ENST00000606000 HBBP68871 147 aa7.88□□□□□ -1.15
CTSA-210ENST00000606000 RHEBQ15382 184 aa7.88□□□□□ -1.15
CTSA-210ENST00000606000 RNASE13Q5GAN3 156 aaKnown RBP7.88□□□□□ -1.15
CTSA-210ENST00000606000 SDIM1Q6ZPB5 146 aa7.88□□□□□ -1.15
CTSA-210ENST00000606000 TMEM101Q96IK0 257 aa7.88□□□□□ -1.15
CTSA-210ENST00000606000 CTDSP1Q9GZU7 261 aa7.88□□□□□ -1.15
CTSA-210ENST00000606000 D6R8Y8 96 aa7.87□□□□□ -1.15
CTSA-210ENST00000606000 VCYO14598 125 aa7.87□□□□□ -1.15
CTSA-210ENST00000606000 NPYP01303 97 aa7.87□□□□□ -1.15
CTSA-210ENST00000606000 CKS2P33552 79 aa7.87□□□□□ -1.15
CTSA-210ENST00000606000 MRPL52Q86TS9 123 aaKnown RBP7.87□□□□□ -1.15
CTSA-210ENST00000606000 CDC42SE2Q9NRR3 84 aa7.87□□□□□ -1.15
CTSA-210ENST00000606000 UBE2D4Q9Y2X8 147 aa7.87□□□□□ -1.15
CTSA-210ENST00000606000 A0A1B0GW15 77 aa7.86□□□□□ -1.15
CTSA-210ENST00000606000 TNFRSF6BO95407 300 aa7.86□□□□□ -1.15
CTSA-210ENST00000606000 SVBPQ8N300 66 aa7.86□□□□□ -1.15
CTSA-210ENST00000606000 ZNF664Q8N3J9 261 aa7.86□□□□□ -1.15
CTSA-210ENST00000606000 AP5S1Q9NUS5 200 aa7.86□□□□□ -1.15
CTSA-210ENST00000606000 IGHV3-64A0A075B6Q5 118 aa7.85□□□□□ -1.15
CTSA-210ENST00000606000 GVQW2A0A096LPI5 108 aaPredicted RBP7.85□□□□□ -1.15
CTSA-210ENST00000606000 SNAPINO95295 136 aa7.85□□□□□ -1.15
CTSA-210ENST00000606000 PPP1R17O96001 155 aa7.85□□□□□ -1.15
CTSA-210ENST00000606000 Q6ZUT4 128 aa7.85□□□□□ -1.15
CTSA-210ENST00000606000 ATP5L2Q7Z4Y8 100 aa7.85□□□□□ -1.15
CTSA-210ENST00000606000 LINC00526Q96FQ7 95 aa7.85□□□□□ -1.15
CTSA-210ENST00000606000 KIR2DL4Q99706 377 aa7.85□□□□□ -1.15
CTSA-210ENST00000606000 MYCBP2O75592 4640 aa7.85□□□□□ -1.15
CTSA-210ENST00000606000 TRBV24-1A0A075B6N3 115 aa7.84□□□□□ -1.15
CTSA-210ENST00000606000 S100A8P05109 93 aa7.84□□□□□ -1.15
CTSA-210ENST00000606000 S100PP25815 95 aa7.84□□□□□ -1.15
CTSA-210ENST00000606000 RPL39P62891 51 aaKnown RBP7.84□□□□□ -1.15
CTSA-210ENST00000606000 IMMP2LQ96T52 175 aa7.84□□□□□ -1.15
CTSA-210ENST00000606000 C20orf78Q9BR46 151 aa7.84□□□□□ -1.15
CTSA-210ENST00000606000 SMIM2Q9BVW6 85 aa7.84□□□□□ -1.15
CTSA-210ENST00000606000 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.83□□□□□ -1.16
CTSA-210ENST00000606000 TCAPO15273 167 aa7.83□□□□□ -1.16
CTSA-210ENST00000606000 LORP23490 312 aaPredicted RBP7.83□□□□□ -1.16
CTSA-210ENST00000606000 CIRBPQ14011 172 aaKnown RBP7.83□□□□□ -1.16
CTSA-210ENST00000606000 SS18Q15532 418 aa7.83□□□□□ -1.16
CTSA-210ENST00000606000 CFAP161Q6P656 301 aa7.83□□□□□ -1.16
CTSA-210ENST00000606000 FAM104AQ969W3 186 aa7.83□□□□□ -1.16
CTSA-210ENST00000606000 HNRNPA3P51991 378 aaKnown RBP7.82□□□□□ -1.16
CTSA-210ENST00000606000 RPL32P62910 135 aaKnown RBP7.82□□□□□ -1.16
CTSA-210ENST00000606000 COX6A2Q02221 97 aa7.82□□□□□ -1.16
CTSA-210ENST00000606000 PRSS3P2Q8NHM4 247 aa7.82□□□□□ -1.16
CTSA-210ENST00000606000 SPACA4Q8TDM5 124 aa7.82□□□□□ -1.16
CTSA-210ENST00000606000 OPRPNQ99935 248 aaPredicted RBP7.82□□□□□ -1.16
CTSA-210ENST00000606000 A0A087WYN8 130 aa7.81□□□□□ -1.16
CTSA-210ENST00000606000 TGIF2-C20orf24A0A0A6YYL0 155 aa7.81□□□□□ -1.16
CTSA-210ENST00000606000 TRAV13-1A0A0B4J241 112 aa7.81□□□□□ -1.16
CTSA-210ENST00000606000 RPL37AP61513 92 aaKnown RBP7.81□□□□□ -1.16
CTSA-210ENST00000606000 CD164L2Q6UWJ8 174 aa7.81□□□□□ -1.16
CTSA-210ENST00000606000 TMEM136Q6ZRR5 245 aa7.81□□□□□ -1.16
CTSA-210ENST00000606000 CSDC2Q9Y534 153 aaKnown RBP7.81□□□□□ -1.16
CTSA-210ENST00000606000 SRRM2Q9UQ35 2752 aaKnown RBP7.81□□□□□ -1.16
CTSA-210ENST00000606000 HERC1Q15751 4861 aa7.8□□□□□ -1.16
CTSA-210ENST00000606000 TRAV9-1A0A075B6T8 112 aa7.8□□□□□ -1.16
CTSA-210ENST00000606000 IGHV1-58A0A0C4DH39 117 aa7.8□□□□□ -1.16
CTSA-210ENST00000606000 IGKV2-24A0A0C4DH68 120 aa7.8□□□□□ -1.16
CTSA-210ENST00000606000 CBLN2Q8IUK8 224 aa7.8□□□□□ -1.16
CTSA-210ENST00000606000 ORMDL3Q8N138 153 aa7.8□□□□□ -1.16
CTSA-210ENST00000606000 PRELID3AQ96N28 172 aa7.8□□□□□ -1.16
CTSA-210ENST00000606000 A0A096LNI7 61 aa7.79□□□□□ -1.16
CTSA-210ENST00000606000 LOC105371267A0A1B0GV96 52 aa7.79□□□□□ -1.16
CTSA-210ENST00000606000 PPBPP02775 128 aa7.79□□□□□ -1.16
CTSA-210ENST00000606000 KIAA1644Q3SXP7 199 aa7.79□□□□□ -1.16
CTSA-210ENST00000606000 TIMM21Q9BVV7 248 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms