RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 PANO1I0J062 215 aa11.6□□□□□ -0.55
CCDC12-208ENST00000603885 VCYO14598 125 aa11.6□□□□□ -0.55
CCDC12-208ENST00000603885 MRPL52Q86TS9 123 aaKnown RBP11.6□□□□□ -0.55
CCDC12-208ENST00000603885 FCER1GP30273 86 aa11.59□□□□□ -0.55
CCDC12-208ENST00000603885 RPL37AP61513 92 aaKnown RBP11.59□□□□□ -0.55
CCDC12-208ENST00000603885 CIRBPQ14011 172 aaKnown RBP11.59□□□□□ -0.55
CCDC12-208ENST00000603885 HIGD2BQ4VC39 106 aa11.59□□□□□ -0.55
CCDC12-208ENST00000603885 LINC00959A0A1B0GUT2 108 aa11.58□□□□□ -0.56
CCDC12-208ENST00000603885 A0A1B0GW15 77 aa11.58□□□□□ -0.56
CCDC12-208ENST00000603885 KRTAP29-1A8MX34 341 aaPredicted RBP11.58□□□□□ -0.56
CCDC12-208ENST00000603885 XCL1P47992 114 aa11.58□□□□□ -0.56
CCDC12-208ENST00000603885 CAMPP49913 170 aa11.58□□□□□ -0.56
CCDC12-208ENST00000603885 SUMO2P61956 95 aaKnown RBP11.58□□□□□ -0.56
CCDC12-208ENST00000603885 FOXI1Q12951 378 aa11.58□□□□□ -0.56
CCDC12-208ENST00000603885 FAM104BQ5XKR9 115 aa11.58□□□□□ -0.56
CCDC12-208ENST00000603885 NRACQ8N912 160 aa11.58□□□□□ -0.56
CCDC12-208ENST00000603885 PKHD1L1Q86WI1 4243 aa11.57□□□□□ -0.56
CCDC12-208ENST00000603885 GVQW2A0A096LPI5 108 aaPredicted RBP11.57□□□□□ -0.56
CCDC12-208ENST00000603885 PPP1R2P9O14990 202 aa11.57□□□□□ -0.56
CCDC12-208ENST00000603885 CCL25O15444 150 aa11.57□□□□□ -0.56
CCDC12-208ENST00000603885 MRPL51Q4U2R6 128 aaKnown RBP11.57□□□□□ -0.56
CCDC12-208ENST00000603885 DPH3Q96FX2 82 aa11.57□□□□□ -0.56
CCDC12-208ENST00000603885 KIR2DL4Q99706 377 aa11.57□□□□□ -0.56
CCDC12-208ENST00000603885 CDC42SE2Q9NRR3 84 aa11.57□□□□□ -0.56
CCDC12-208ENST00000603885 SMAGPQ0VAQ4 97 aa11.56□□□□□ -0.56
CCDC12-208ENST00000603885 SS18Q15532 418 aa11.56□□□□□ -0.56
CCDC12-208ENST00000603885 ZNF664Q8N3J9 261 aa11.56□□□□□ -0.56
CCDC12-208ENST00000603885 LINC00862A6NCI5 91 aa11.55□□□□□ -0.56
CCDC12-208ENST00000603885 CHTF8P0CG12 524 aa11.55□□□□□ -0.56
CCDC12-208ENST00000603885 S100A8P05109 93 aa11.54□□□□□ -0.56
CCDC12-208ENST00000603885 SPACA4Q8TDM5 124 aa11.54□□□□□ -0.56
CCDC12-208ENST00000603885 A0A087WYN8 130 aa11.53□□□□□ -0.56
CCDC12-208ENST00000603885 IGHV1-58A0A0C4DH39 117 aa11.53□□□□□ -0.56
CCDC12-208ENST00000603885 CKS2P33552 79 aa11.53□□□□□ -0.56
CCDC12-208ENST00000603885 HBBP68871 147 aa11.53□□□□□ -0.56
CCDC12-208ENST00000603885 COX6A2Q02221 97 aa11.53□□□□□ -0.56
CCDC12-208ENST00000603885 MRPL54Q6P161 138 aaKnown RBP11.53□□□□□ -0.56
CCDC12-208ENST00000603885 CD164L2Q6UWJ8 174 aa11.53□□□□□ -0.56
CCDC12-208ENST00000603885 C20orf78Q9BR46 151 aa11.53□□□□□ -0.56
CCDC12-208ENST00000603885 CSDC2Q9Y534 153 aaKnown RBP11.53□□□□□ -0.56
CCDC12-208ENST00000603885 F8W036 122 aa11.52□□□□□ -0.57
CCDC12-208ENST00000603885 UBE2D4Q9Y2X8 147 aa11.52□□□□□ -0.57
CCDC12-208ENST00000603885 LRP1Q07954 4544 aaKnown RBP11.51□□□□□ -0.57
CCDC12-208ENST00000603885 TRBV24-1A0A075B6N3 115 aa11.51□□□□□ -0.57
CCDC12-208ENST00000603885 TMEM18Q96B42 140 aa11.51□□□□□ -0.57
CCDC12-208ENST00000603885 A0A1B0GXF2 115 aa11.5□□□□□ -0.57
CCDC12-208ENST00000603885 C1orf196B1AJZ1 125 aa11.5□□□□□ -0.57
CCDC12-208ENST00000603885 TCAPO15273 167 aa11.5□□□□□ -0.57
CCDC12-208ENST00000603885 TNFRSF6BO95407 300 aa11.5□□□□□ -0.57
CCDC12-208ENST00000603885 OXTP01178 125 aa11.5□□□□□ -0.57
CCDC12-208ENST00000603885 RPL32P62910 135 aaKnown RBP11.5□□□□□ -0.57
CCDC12-208ENST00000603885 PRSS3P2Q8NHM4 247 aa11.5□□□□□ -0.57
CCDC12-208ENST00000603885 FAT3Q8TDW7 4589 aa11.5□□□□□ -0.57
CCDC12-208ENST00000603885 D6R8Y8 96 aa11.49□□□□□ -0.57
CCDC12-208ENST00000603885 TIMM21Q9BVV7 248 aa11.49□□□□□ -0.57
CCDC12-208ENST00000603885 PLAC8Q9NZF1 115 aa11.49□□□□□ -0.57
CCDC12-208ENST00000603885 PKIGQ9Y2B9 76 aa11.49□□□□□ -0.57
CCDC12-208ENST00000603885 IGKV2-24A0A0C4DH68 120 aa11.48□□□□□ -0.57
CCDC12-208ENST00000603885 ZNF561-AS1K7EIQ3 104 aa11.48□□□□□ -0.57
CCDC12-208ENST00000603885 MAJINQ3KP22 176 aa11.48□□□□□ -0.57
CCDC12-208ENST00000603885 RNASE13Q5GAN3 156 aaKnown RBP11.48□□□□□ -0.57
CCDC12-208ENST00000603885 CARD19Q96LW7 228 aa11.48□□□□□ -0.57
CCDC12-208ENST00000603885 SMIM2Q9BVW6 85 aa11.48□□□□□ -0.57
CCDC12-208ENST00000603885 PPBPP02775 128 aa11.47□□□□□ -0.57
CCDC12-208ENST00000603885 MALP21145 153 aa11.47□□□□□ -0.57
CCDC12-208ENST00000603885 HNRNPA3P51991 378 aaKnown RBP11.47□□□□□ -0.57
CCDC12-208ENST00000603885 RAB14P61106 215 aa11.47□□□□□ -0.57
CCDC12-208ENST00000603885 Q6ZUT4 128 aa11.47□□□□□ -0.57
CCDC12-208ENST00000603885 ATP5L2Q7Z4Y8 100 aa11.47□□□□□ -0.57
CCDC12-208ENST00000603885 LINC00526Q96FQ7 95 aa11.47□□□□□ -0.57
CCDC12-208ENST00000603885 TRAV13-1A0A0B4J241 112 aa11.46□□□□□ -0.57
CCDC12-208ENST00000603885 COX7A2LO14548 114 aa11.46□□□□□ -0.57
CCDC12-208ENST00000603885 PHOX2AO14813 284 aa11.46□□□□□ -0.57
CCDC12-208ENST00000603885 NPYP01303 97 aa11.46□□□□□ -0.57
CCDC12-208ENST00000603885 SYCNQ0VAF6 134 aa11.45□□□□□ -0.58
CCDC12-208ENST00000603885 PNRC1Q12796 327 aaPredicted RBP11.45□□□□□ -0.58
CCDC12-208ENST00000603885 C7orf33Q8WU49 177 aa11.45□□□□□ -0.58
CCDC12-208ENST00000603885 LINC00474Q9P2X8 69 aa11.45□□□□□ -0.58
CCDC12-208ENST00000603885 A0A096LNI7 61 aa11.44□□□□□ -0.58
CCDC12-208ENST00000603885 RPL39P62891 51 aaKnown RBP11.44□□□□□ -0.58
CCDC12-208ENST00000603885 ORMDL3Q8N138 153 aa11.44□□□□□ -0.58
CCDC12-208ENST00000603885 STPG4Q8N801 248 aa11.44□□□□□ -0.58
CCDC12-208ENST00000603885 SPANXA1Q9NS26 97 aa11.43□□□□□ -0.58
CCDC12-208ENST00000603885 IGLV4-69A0A075B6H9 119 aa11.42□□□□□ -0.58
CCDC12-208ENST00000603885 MT-ND4LP03901 98 aa11.42□□□□□ -0.58
CCDC12-208ENST00000603885 TMEM136Q6ZRR5 245 aa11.42□□□□□ -0.58
CCDC12-208ENST00000603885 ANAPC16Q96DE5 110 aa11.42□□□□□ -0.58
CCDC12-208ENST00000603885 C5orf38Q86SI9 138 aa11.41□□□□□ -0.58
CCDC12-208ENST00000603885 PRELID3AQ96N28 172 aa11.41□□□□□ -0.58
CCDC12-208ENST00000603885 APOMO95445 188 aa11.4□□□□□ -0.58
CCDC12-208ENST00000603885 RAB5AP20339 215 aa11.4□□□□□ -0.58
CCDC12-208ENST00000603885 MRPS36P82909 103 aaKnown RBP11.4□□□□□ -0.58
CCDC12-208ENST00000603885 Q6ZRU5 148 aa11.39□□□□□ -0.59
CCDC12-208ENST00000603885 CAMK2N2Q96S95 79 aa11.39□□□□□ -0.59
CCDC12-208ENST00000603885 LOC107984640A0A0U1RRK4 108 aa11.38□□□□□ -0.59
CCDC12-208ENST00000603885 FAM104AQ969W3 186 aa11.38□□□□□ -0.59
CCDC12-208ENST00000603885 C2orf48Q96LS8 159 aa11.38□□□□□ -0.59
CCDC12-208ENST00000603885 OPRPNQ99935 248 aaPredicted RBP11.38□□□□□ -0.59
CCDC12-208ENST00000603885 LAMTOR2Q9Y2Q5 125 aa11.38□□□□□ -0.59
CCDC12-208ENST00000603885 IFITM10A6NMD0 228 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms