RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 C7orf77A4D0Y5 90 aa8.31□□□□□ -1.08
LIG1-212ENST00000596549 RPL37AP61513 92 aaKnown RBP8.31□□□□□ -1.08
LIG1-212ENST00000596549 MRPL52Q86TS9 123 aaKnown RBP8.31□□□□□ -1.08
LIG1-212ENST00000596549 SPACA4Q8TDM5 124 aa8.31□□□□□ -1.08
LIG1-212ENST00000596549 AP5S1Q9NUS5 200 aa8.31□□□□□ -1.08
LIG1-212ENST00000596549 FAT3Q8TDW7 4589 aa8.3□□□□□ -1.08
LIG1-212ENST00000596549 PKHD1L1Q86WI1 4243 aa8.3□□□□□ -1.08
LIG1-212ENST00000596549 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.3□□□□□ -1.08
LIG1-212ENST00000596549 LINC00959A0A1B0GUT2 108 aa8.3□□□□□ -1.08
LIG1-212ENST00000596549 J3QL48 77 aa8.3□□□□□ -1.08
LIG1-212ENST00000596549 CCL25O15444 150 aa8.3□□□□□ -1.08
LIG1-212ENST00000596549 SUMO2P61956 95 aaKnown RBP8.3□□□□□ -1.08
LIG1-212ENST00000596549 MRPL51Q4U2R6 128 aaKnown RBP8.3□□□□□ -1.08
LIG1-212ENST00000596549 BTF3L4Q96K17 158 aa8.3□□□□□ -1.08
LIG1-212ENST00000596549 XCL1P47992 114 aa8.29□□□□□ -1.08
LIG1-212ENST00000596549 PEA15Q15121 130 aa8.29□□□□□ -1.08
LIG1-212ENST00000596549 FAM104BQ5XKR9 115 aa8.29□□□□□ -1.08
LIG1-212ENST00000596549 TMEM101Q96IK0 257 aa8.29□□□□□ -1.08
LIG1-212ENST00000596549 CDC42SE2Q9NRR3 84 aa8.29□□□□□ -1.08
LIG1-212ENST00000596549 A0A087WYN8 130 aa8.28□□□□□ -1.08
LIG1-212ENST00000596549 A0A1B0GXF2 115 aa8.28□□□□□ -1.08
LIG1-212ENST00000596549 CAMPP49913 170 aa8.28□□□□□ -1.08
LIG1-212ENST00000596549 CFAP161Q6P656 301 aa8.28□□□□□ -1.08
LIG1-212ENST00000596549 SMDT1Q9H4I9 107 aa8.28□□□□□ -1.08
LIG1-212ENST00000596549 UBE2D4Q9Y2X8 147 aa8.28□□□□□ -1.08
LIG1-212ENST00000596549 COX6A2Q02221 97 aa8.27□□□□□ -1.09
LIG1-212ENST00000596549 RNASE13Q5GAN3 156 aaKnown RBP8.27□□□□□ -1.09
LIG1-212ENST00000596549 MRPL54Q6P161 138 aaKnown RBP8.27□□□□□ -1.09
LIG1-212ENST00000596549 ZNF664Q8N3J9 261 aa8.27□□□□□ -1.09
LIG1-212ENST00000596549 PRSS3P2Q8NHM4 247 aa8.27□□□□□ -1.09
LIG1-212ENST00000596549 VCYO14598 125 aa8.26□□□□□ -1.09
LIG1-212ENST00000596549 FCER1GP30273 86 aa8.26□□□□□ -1.09
LIG1-212ENST00000596549 Q6ZUT4 128 aa8.26□□□□□ -1.09
LIG1-212ENST00000596549 LINC00526Q96FQ7 95 aa8.26□□□□□ -1.09
LIG1-212ENST00000596549 PLAC8Q9NZF1 115 aa8.26□□□□□ -1.09
LIG1-212ENST00000596549 TRBV24-1A0A075B6N3 115 aa8.25□□□□□ -1.09
LIG1-212ENST00000596549 A0A096LNI7 61 aa8.25□□□□□ -1.09
LIG1-212ENST00000596549 PPP1R2P9O14990 202 aa8.25□□□□□ -1.09
LIG1-212ENST00000596549 PPP1R17O96001 155 aa8.25□□□□□ -1.09
LIG1-212ENST00000596549 HBBP68871 147 aa8.25□□□□□ -1.09
LIG1-212ENST00000596549 KIR2DL4Q99706 377 aa8.25□□□□□ -1.09
LIG1-212ENST00000596549 CSDC2Q9Y534 153 aaKnown RBP8.25□□□□□ -1.09
LIG1-212ENST00000596549 UBR4Q5T4S7 5183 aa8.25□□□□□ -1.09
LIG1-212ENST00000596549 IGHV1-58A0A0C4DH39 117 aa8.24□□□□□ -1.09
LIG1-212ENST00000596549 IGKV2-24A0A0C4DH68 120 aa8.24□□□□□ -1.09
LIG1-212ENST00000596549 A0A1B0GW15 77 aa8.24□□□□□ -1.09
LIG1-212ENST00000596549 LINC00862A6NCI5 91 aa8.24□□□□□ -1.09
LIG1-212ENST00000596549 D6R8Y8 96 aa8.24□□□□□ -1.09
LIG1-212ENST00000596549 TNFRSF6BO95407 300 aa8.24□□□□□ -1.09
LIG1-212ENST00000596549 NPYP01303 97 aa8.24□□□□□ -1.09
LIG1-212ENST00000596549 RPL32P62910 135 aaKnown RBP8.24□□□□□ -1.09
LIG1-212ENST00000596549 SS18Q15532 418 aa8.24□□□□□ -1.09
LIG1-212ENST00000596549 CD164L2Q6UWJ8 174 aa8.24□□□□□ -1.09
LIG1-212ENST00000596549 FAM104AQ969W3 186 aa8.24□□□□□ -1.09
LIG1-212ENST00000596549 SMIM2Q9BVW6 85 aa8.24□□□□□ -1.09
LIG1-212ENST00000596549 OXTP01178 125 aa8.23□□□□□ -1.09
LIG1-212ENST00000596549 CKS2P33552 79 aa8.23□□□□□ -1.09
LIG1-212ENST00000596549 C20orf78Q9BR46 151 aa8.23□□□□□ -1.09
LIG1-212ENST00000596549 PHOX2AO14813 284 aa8.22□□□□□ -1.09
LIG1-212ENST00000596549 RPL39P62891 51 aaKnown RBP8.22□□□□□ -1.09
LIG1-212ENST00000596549 CARD19Q96LW7 228 aa8.22□□□□□ -1.09
LIG1-212ENST00000596549 TIMM21Q9BVV7 248 aa8.22□□□□□ -1.09
LIG1-212ENST00000596549 MAJINQ3KP22 176 aa8.21□□□□□ -1.1
LIG1-212ENST00000596549 TRAV13-1A0A0B4J241 112 aa8.2□□□□□ -1.1
LIG1-212ENST00000596549 C1orf196B1AJZ1 125 aa8.2□□□□□ -1.1
LIG1-212ENST00000596549 F8W036 122 aa8.2□□□□□ -1.1
LIG1-212ENST00000596549 S100A8P05109 93 aa8.2□□□□□ -1.1
LIG1-212ENST00000596549 ATP5L2Q7Z4Y8 100 aa8.2□□□□□ -1.1
LIG1-212ENST00000596549 STPG4Q8N801 248 aa8.2□□□□□ -1.1
LIG1-212ENST00000596549 IGLV4-69A0A075B6H9 119 aa8.19□□□□□ -1.1
LIG1-212ENST00000596549 COX7A2LO14548 114 aa8.19□□□□□ -1.1
LIG1-212ENST00000596549 TCAPO15273 167 aa8.19□□□□□ -1.1
LIG1-212ENST00000596549 SYCNQ0VAF6 134 aa8.19□□□□□ -1.1
LIG1-212ENST00000596549 Q6ZRU5 148 aa8.19□□□□□ -1.1
LIG1-212ENST00000596549 TMEM18Q96B42 140 aa8.19□□□□□ -1.1
LIG1-212ENST00000596549 DPH3Q96FX2 82 aa8.19□□□□□ -1.1
LIG1-212ENST00000596549 ZNF561-AS1K7EIQ3 104 aa8.18□□□□□ -1.1
LIG1-212ENST00000596549 PPBPP02775 128 aa8.18□□□□□ -1.1
LIG1-212ENST00000596549 MT1HL1P0DM35 61 aa8.18□□□□□ -1.1
LIG1-212ENST00000596549 SMAGPQ0VAQ4 97 aa8.18□□□□□ -1.1
LIG1-212ENST00000596549 PNRC1Q12796 327 aaPredicted RBP8.18□□□□□ -1.1
LIG1-212ENST00000596549 OPRPNQ99935 248 aaPredicted RBP8.18□□□□□ -1.1
LIG1-212ENST00000596549 PRR3P79522 188 aaKnown RBP8.17□□□□□ -1.1
LIG1-212ENST00000596549 C5orf38Q86SI9 138 aa8.17□□□□□ -1.1
LIG1-212ENST00000596549 ORMDL3Q8N138 153 aa8.17□□□□□ -1.1
LIG1-212ENST00000596549 SPANXA1Q9NS26 97 aa8.17□□□□□ -1.1
LIG1-212ENST00000596549 MALP21145 153 aa8.16□□□□□ -1.1
LIG1-212ENST00000596549 MRPS36P82909 103 aaKnown RBP8.16□□□□□ -1.1
LIG1-212ENST00000596549 C7orf33Q8WU49 177 aa8.16□□□□□ -1.1
LIG1-212ENST00000596549 PRELID3AQ96N28 172 aa8.16□□□□□ -1.1
LIG1-212ENST00000596549 IGHV3OR16-9A0A0B4J2B5 98 aa8.15□□□□□ -1.1
LIG1-212ENST00000596549 ADCYAP1P18509 176 aa8.15□□□□□ -1.1
LIG1-212ENST00000596549 PTTG1IPP53801 180 aa8.15□□□□□ -1.1
LIG1-212ENST00000596549 SPAG11BQ08648 103 aa8.15□□□□□ -1.1
LIG1-212ENST00000596549 TMEM136Q6ZRR5 245 aa8.15□□□□□ -1.1
LIG1-212ENST00000596549 CAMK2N2Q96S95 79 aa8.15□□□□□ -1.1
LIG1-212ENST00000596549 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.14□□□□□ -1.11
LIG1-212ENST00000596549 CLLU1Q5K131 121 aa8.14□□□□□ -1.11
LIG1-212ENST00000596549 ANAPC16Q96DE5 110 aa8.14□□□□□ -1.11
LIG1-212ENST00000596549 C2orf48Q96LS8 159 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 197.5 ms