RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 TIMM21Q9BVV7 248 aa14.04□□□□□ -0.16
MBD3-209ENST00000592012 NTM-AS1Q6ZSK4 140 aa14.03□□□□□ -0.16
MBD3-209ENST00000592012 IGHV3-30-3P0DP02 117 aa14.03□□□□□ -0.16
MBD3-209ENST00000592012 TMEM238LA0A1B0GVL6 79 aa14.02□□□□□ -0.16
MBD3-209ENST00000592012 A6NJY4 79 aa14.02□□□□□ -0.16
MBD3-209ENST00000592012 IGHV3-30P01768 117 aa14.02□□□□□ -0.16
MBD3-209ENST00000592012 IGHV3-30-5P0DP03 117 aa14.02□□□□□ -0.16
MBD3-209ENST00000592012 UBE2D1P51668 147 aa14.02□□□□□ -0.16
MBD3-209ENST00000592012 SPATA3Q8NHX4 192 aa14.02□□□□□ -0.16
MBD3-209ENST00000592012 GAGE12JA6NER3 117 aa14.02□□□□□ -0.17
MBD3-209ENST00000592012 GAGE4Q13068 117 aa14.02□□□□□ -0.17
MBD3-209ENST00000592012 GAGE5Q13069 117 aa14.02□□□□□ -0.17
MBD3-209ENST00000592012 GAGE13Q4V321 117 aa14.02□□□□□ -0.17
MBD3-209ENST00000592012 LINC00694P0DN24 101 aa14.01□□□□□ -0.17
MBD3-209ENST00000592012 CIDEAO60543 219 aa14.01□□□□□ -0.17
MBD3-209ENST00000592012 DGAT2L7PQ6IED9 249 aa14.01□□□□□ -0.17
MBD3-209ENST00000592012 TRAV8-3A0A0A6YYJ7 113 aa14□□□□□ -0.17
MBD3-209ENST00000592012 IGHV1-58A0A0C4DH39 117 aa14□□□□□ -0.17
MBD3-209ENST00000592012 INSL3P51460 131 aa14□□□□□ -0.17
MBD3-209ENST00000592012 C10orf126Q8N4M7 172 aa14□□□□□ -0.17
MBD3-209ENST00000592012 TRBV6-4A0A1B0GX49 114 aa13.99□□□□□ -0.17
MBD3-209ENST00000592012 SBSPONQ8IVN8 264 aa13.98□□□□□ -0.17
MBD3-209ENST00000592012 CSDC2Q9Y534 153 aaKnown RBP13.98□□□□□ -0.17
MBD3-209ENST00000592012 TRRAPQ9Y4A5 3859 aa13.98□□□□□ -0.17
MBD3-209ENST00000592012 ATRQ13535 2644 aa13.98□□□□□ -0.17
MBD3-209ENST00000592012 VSIG2Q96IQ7 327 aa13.97□□□□□ -0.17
MBD3-209ENST00000592012 GEMIN7Q9H840 131 aaKnown RBP13.97□□□□□ -0.17
MBD3-209ENST00000592012 TIRAPP58753 221 aa13.97□□□□□ -0.17
MBD3-209ENST00000592012 NBEAL2Q6ZNJ1 2754 aa13.97□□□□□ -0.17
MBD3-209ENST00000592012 LOC100131303A0A0U1RQF7 123 aa13.96□□□□□ -0.17
MBD3-209ENST00000592012 FOSL1P15407 271 aa13.96□□□□□ -0.17
MBD3-209ENST00000592012 C9orf66Q5T8R8 295 aa13.96□□□□□ -0.17
MBD3-209ENST00000592012 GTSF1LQ9H1H1 148 aa13.96□□□□□ -0.17
MBD3-209ENST00000592012 IGLV5-45A0A087WSX0 123 aa13.96□□□□□ -0.18
MBD3-209ENST00000592012 TRGV4A0A0C4DH28 118 aa13.96□□□□□ -0.18
MBD3-209ENST00000592012 A0A0J9YXY3 114 aa13.96□□□□□ -0.18
MBD3-209ENST00000592012 CRLF1O75462 422 aa13.96□□□□□ -0.18
MBD3-209ENST00000592012 FHL2Q14192 279 aa13.96□□□□□ -0.18
MBD3-209ENST00000592012 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.96□□□□□ -0.18
MBD3-209ENST00000592012 PGPEP1Q9NXJ5 209 aa13.96□□□□□ -0.18
MBD3-209ENST00000592012 SPINK8P0C7L1 97 aa13.95□□□□□ -0.18
MBD3-209ENST00000592012 OCIAD2Q56VL3 154 aa13.95□□□□□ -0.18
MBD3-209ENST00000592012 CDKN2A-AS1Q9UH64 79 aa13.95□□□□□ -0.18
MBD3-209ENST00000592012 TEP1Q99973 2627 aaKnown RBP13.95□□□□□ -0.18
MBD3-209ENST00000592012 APOMO95445 188 aa13.95□□□□□ -0.18
MBD3-209ENST00000592012 CFC1BP0CG36 223 aa13.94□□□□□ -0.18
MBD3-209ENST00000592012 CFC1P0CG37 223 aa13.94□□□□□ -0.18
MBD3-209ENST00000592012 A8MZ25 164 aa13.94□□□□□ -0.18
MBD3-209ENST00000592012 COX6A2Q02221 97 aa13.94□□□□□ -0.18
MBD3-209ENST00000592012 LINC00242Q5T6M2 205 aa13.93□□□□□ -0.18
MBD3-209ENST00000592012 CITED1Q99966 193 aa13.93□□□□□ -0.18
MBD3-209ENST00000592012 CDC42SE2Q9NRR3 84 aa13.93□□□□□ -0.18
MBD3-209ENST00000592012 KIR2DL5BQ8NHK3 375 aa13.93□□□□□ -0.18
MBD3-209ENST00000592012 NDUFA12Q9UI09 145 aa13.93□□□□□ -0.18
MBD3-209ENST00000592012 TMEM238C9JI98 176 aa13.92□□□□□ -0.18
MBD3-209ENST00000592012 FAM19A3Q7Z5A8 133 aa13.92□□□□□ -0.18
MBD3-209ENST00000592012 RBX1P62877 108 aa13.91□□□□□ -0.18
MBD3-209ENST00000592012 LITAFQ99732 161 aa13.91□□□□□ -0.18
MBD3-209ENST00000592012 TMEM243Q9BU79 118 aa13.91□□□□□ -0.18
MBD3-209ENST00000592012 X6R8D5 127 aa13.91□□□□□ -0.18
MBD3-209ENST00000592012 TSPAN13O95857 204 aa13.91□□□□□ -0.18
MBD3-209ENST00000592012 LINC00612Q8N6U2 182 aa13.91□□□□□ -0.18
MBD3-209ENST00000592012 HERVK_113P63121 156 aa13.9□□□□□ -0.18
MBD3-209ENST00000592012 MUSTN1Q8IVN3 82 aa13.9□□□□□ -0.18
MBD3-209ENST00000592012 DEFB130BP0DP73 79 aa13.9□□□□□ -0.18
MBD3-209ENST00000592012 DEFB130AP0DP74 79 aa13.9□□□□□ -0.18
MBD3-209ENST00000592012 SMAGPQ0VAQ4 97 aa13.9□□□□□ -0.18
MBD3-209ENST00000592012 ZFAND6Q6FIF0 208 aa13.9□□□□□ -0.18
MBD3-209ENST00000592012 TMEM101Q96IK0 257 aa13.9□□□□□ -0.18
MBD3-209ENST00000592012 A4D1N5 150 aa13.89□□□□□ -0.19
MBD3-209ENST00000592012 H3BMG7 143 aa13.89□□□□□ -0.19
MBD3-209ENST00000592012 UBE2L6O14933 153 aa13.89□□□□□ -0.19
MBD3-209ENST00000592012 TRAV13-1A0A0B4J241 112 aa13.88□□□□□ -0.19
MBD3-209ENST00000592012 SMIM9A6NGZ8 99 aa13.88□□□□□ -0.19
MBD3-209ENST00000592012 CYSRT1A8MQ03 144 aa13.88□□□□□ -0.19
MBD3-209ENST00000592012 RPL24P83731 157 aaKnown RBP13.88□□□□□ -0.19
MBD3-209ENST00000592012 H7C423 109 aa13.87□□□□□ -0.19
MBD3-209ENST00000592012 ADAMTSL4-AS1Q5T5F5 129 aa13.87□□□□□ -0.19
MBD3-209ENST00000592012 PRO1854Q9UHT4 67 aa13.87□□□□□ -0.19
MBD3-209ENST00000592012 EIF4EBP3O60516 100 aaPredicted RBP13.87□□□□□ -0.19
MBD3-209ENST00000592012 IGLV5-39A0A0G2JS06 123 aa13.86□□□□□ -0.19
MBD3-209ENST00000592012 TRBV6-8A0A0A6YYG3 113 aa13.85□□□□□ -0.19
MBD3-209ENST00000592012 F8W1H4 67 aa13.85□□□□□ -0.19
MBD3-209ENST00000592012 K7ERU9 68 aa13.85□□□□□ -0.19
MBD3-209ENST00000592012 SFTA2Q6UW10 78 aa13.85□□□□□ -0.19
MBD3-209ENST00000592012 SPANXDQ9BXN6 97 aa13.84□□□□□ -0.19
MBD3-209ENST00000592012 SPANXCQ9NY87 97 aa13.84□□□□□ -0.19
MBD3-209ENST00000592012 LOC107984156A0A0G2JMH3 177 aa13.83□□□□□ -0.19
MBD3-209ENST00000592012 NDUFA1O15239 70 aa13.83□□□□□ -0.19
MBD3-209ENST00000592012 ARL17AQ8IVW1 177 aa13.83□□□□□ -0.19
MBD3-209ENST00000592012 SMIM1B2RUZ4 78 aa13.83□□□□□ -0.2
MBD3-209ENST00000592012 PRSS2P07478 247 aa13.83□□□□□ -0.2
MBD3-209ENST00000592012 WFDC9Q8NEX5 89 aa13.83□□□□□ -0.2
MBD3-209ENST00000592012 F8P00451 2351 aa13.83□□□□□ -0.2
MBD3-209ENST00000592012 A0A0B4J2C4 111 aa13.82□□□□□ -0.2
MBD3-209ENST00000592012 GAGE6Q13070 117 aa13.82□□□□□ -0.2
MBD3-209ENST00000592012 F5H768 121 aa13.82□□□□□ -0.2
MBD3-209ENST00000592012 WFDC2Q14508 124 aa13.82□□□□□ -0.2
MBD3-209ENST00000592012 RNF151Q2KHN1 245 aa13.82□□□□□ -0.2
MBD3-209ENST00000592012 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms