RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 IGHV3-30P01768 117 aa4.96□□□□□ -1.62
VMP1-213ENST00000591877 IGHV3-33P01772 117 aa4.96□□□□□ -1.62
VMP1-213ENST00000591877 IGHV3-30-3P0DP02 117 aa4.96□□□□□ -1.62
VMP1-213ENST00000591877 IGHV3-30-5P0DP03 117 aa4.96□□□□□ -1.62
VMP1-213ENST00000591877 GNG4P50150 75 aa4.96□□□□□ -1.62
VMP1-213ENST00000591877 CENPWQ5EE01 88 aa4.96□□□□□ -1.62
VMP1-213ENST00000591877 OR10J3Q5JRS4 329 aa4.96□□□□□ -1.62
VMP1-213ENST00000591877 KCNIP4Q6PIL6 250 aa4.96□□□□□ -1.62
VMP1-213ENST00000591877 Q8N377 158 aa4.96□□□□□ -1.62
VMP1-213ENST00000591877 C10orf126Q8N4M7 172 aa4.96□□□□□ -1.62
VMP1-213ENST00000591877 YPEL4Q96NS1 127 aa4.96□□□□□ -1.62
VMP1-213ENST00000591877 TMSB15BA0A087X1C1 80 aa4.95□□□□□ -1.62
VMP1-213ENST00000591877 TRAV8-6A0A0B4J262 113 aa4.95□□□□□ -1.62
VMP1-213ENST00000591877 S100PP25815 95 aa4.95□□□□□ -1.62
VMP1-213ENST00000591877 UBE2G1P62253 170 aa4.95□□□□□ -1.62
VMP1-213ENST00000591877 ELOBQ15370 118 aa4.95□□□□□ -1.62
VMP1-213ENST00000591877 FAM162BQ5T6X4 162 aa4.95□□□□□ -1.62
VMP1-213ENST00000591877 LINC01561Q8N1V8 128 aa4.95□□□□□ -1.62
VMP1-213ENST00000591877 SFRP2Q96HF1 295 aa4.95□□□□□ -1.62
VMP1-213ENST00000591877 BTF3L4Q96K17 158 aa4.95□□□□□ -1.62
VMP1-213ENST00000591877 IMMP2LQ96T52 175 aa4.95□□□□□ -1.62
VMP1-213ENST00000591877 TRBV24-1A0A075B6N3 115 aa4.94□□□□□ -1.62
VMP1-213ENST00000591877 K7EN84 100 aa4.94□□□□□ -1.62
VMP1-213ENST00000591877 IGLV2-8P01709 118 aa4.94□□□□□ -1.62
VMP1-213ENST00000591877 SEC61GP60059 68 aa4.94□□□□□ -1.62
VMP1-213ENST00000591877 RPL19P84098 196 aaKnown RBP4.94□□□□□ -1.62
VMP1-213ENST00000591877 WFDC2Q14508 124 aa4.94□□□□□ -1.62
VMP1-213ENST00000591877 FAM231DQ6ZW35 169 aa4.94□□□□□ -1.62
VMP1-213ENST00000591877 BIN3Q9NQY0 253 aa4.94□□□□□ -1.62
VMP1-213ENST00000591877 OSTCQ9NRP0 149 aa4.94□□□□□ -1.62
VMP1-213ENST00000591877 TRAV9-1A0A075B6T8 112 aa4.93□□□□□ -1.62
VMP1-213ENST00000591877 M0R381 172 aa4.93□□□□□ -1.62
VMP1-213ENST00000591877 RAB5AP20339 215 aa4.93□□□□□ -1.62
VMP1-213ENST00000591877 RPL13AP40429 203 aaKnown RBP4.93□□□□□ -1.62
VMP1-213ENST00000591877 FAM74A4Q5TZK3 123 aa4.93□□□□□ -1.62
VMP1-213ENST00000591877 DAZ4Q86SG3 579 aaKnown RBP4.93□□□□□ -1.62
VMP1-213ENST00000591877 BAGE2Q86Y30 109 aa4.93□□□□□ -1.62
VMP1-213ENST00000591877 Q8N814 137 aa4.93□□□□□ -1.62
VMP1-213ENST00000591877 DAZ3Q9NR90 486 aaKnown RBP4.93□□□□□ -1.62
VMP1-213ENST00000591877 SRRM2Q9UQ35 2752 aaKnown RBP4.93□□□□□ -1.62
VMP1-213ENST00000591877 PHLDA3Q9Y5J5 127 aa4.93□□□□□ -1.62
VMP1-213ENST00000591877 URGCP-MRPS24S4R325 110 aa4.93□□□□□ -1.62
VMP1-213ENST00000591877 SNAI2O43623 268 aa4.92□□□□□ -1.62
VMP1-213ENST00000591877 PSCAO43653 123 aa4.92□□□□□ -1.62
VMP1-213ENST00000591877 HNRNPA3P51991 378 aaKnown RBP4.92□□□□□ -1.62
VMP1-213ENST00000591877 C6orf226Q5I0X4 101 aa4.92□□□□□ -1.62
VMP1-213ENST00000591877 NIT1Q86X76 327 aa4.92□□□□□ -1.62
VMP1-213ENST00000591877 ZFP82Q8N141 532 aa4.92□□□□□ -1.62
VMP1-213ENST00000591877 OR10AG1Q8NH19 301 aa4.92□□□□□ -1.62
VMP1-213ENST00000591877 DNAJC30Q96LL9 226 aa4.92□□□□□ -1.62
VMP1-213ENST00000591877 V9GYV3 84 aa4.92□□□□□ -1.62
VMP1-213ENST00000591877 FAT1Q14517 4588 aa4.92□□□□□ -1.62
VMP1-213ENST00000591877 TGIF2-C20orf24A0A0A6YYL0 155 aa4.91□□□□□ -1.62
VMP1-213ENST00000591877 MUC21A0A0G2JKD1 596 aa4.91□□□□□ -1.62
VMP1-213ENST00000591877 MUC21A0A140T8X8 626 aa4.91□□□□□ -1.62
VMP1-213ENST00000591877 C1orf196B1AJZ1 125 aa4.91□□□□□ -1.62
VMP1-213ENST00000591877 SMR3BP02814 79 aaPredicted RBP4.91□□□□□ -1.62
VMP1-213ENST00000591877 CXCL1P09341 107 aa4.91□□□□□ -1.62
VMP1-213ENST00000591877 KRTAP10-5P60370 271 aa4.91□□□□□ -1.62
VMP1-213ENST00000591877 RAB5BP61020 215 aa4.91□□□□□ -1.62
VMP1-213ENST00000591877 UBE2D3P61077 147 aa4.91□□□□□ -1.62
VMP1-213ENST00000591877 UBE2D2P62837 147 aa4.91□□□□□ -1.62
VMP1-213ENST00000591877 HAMPP81172 84 aa4.91□□□□□ -1.62
VMP1-213ENST00000591877 KIF25-AS1Q9Y6Z4 181 aa4.91□□□□□ -1.62
VMP1-213ENST00000591877 TRBV7-3A0A075B6L6 115 aa4.9□□□□□ -1.63
VMP1-213ENST00000591877 TRBV10-1A0A0K0K1A3 114 aa4.9□□□□□ -1.63
VMP1-213ENST00000591877 C19orf71A6NCJ1 209 aa4.9□□□□□ -1.63
VMP1-213ENST00000591877 LECT2O14960 151 aa4.9□□□□□ -1.63
VMP1-213ENST00000591877 GATCO43716 136 aaKnown RBP4.9□□□□□ -1.63
VMP1-213ENST00000591877 OR5AL1P0C617 328 aa4.9□□□□□ -1.63
VMP1-213ENST00000591877 RPS10P46783 165 aaKnown RBP4.9□□□□□ -1.63
VMP1-213ENST00000591877 Q5VSD8 79 aa4.9□□□□□ -1.63
VMP1-213ENST00000591877 RNASE7Q9H1E1 156 aaKnown RBP4.9□□□□□ -1.63
VMP1-213ENST00000591877 TRAV8-3A0A0A6YYJ7 113 aa4.89□□□□□ -1.63
VMP1-213ENST00000591877 SMIM27A0A1W2PRY6 76 aa4.89□□□□□ -1.63
VMP1-213ENST00000591877 FAM231BA6NCW3 169 aa4.89□□□□□ -1.63
VMP1-213ENST00000591877 E9PLD3 99 aa4.89□□□□□ -1.63
VMP1-213ENST00000591877 GZMBP10144 247 aa4.89□□□□□ -1.63
VMP1-213ENST00000591877 MT3P25713 68 aa4.89□□□□□ -1.63
VMP1-213ENST00000591877 RAB4BP61018 213 aa4.89□□□□□ -1.63
VMP1-213ENST00000591877 COX19Q49B96 90 aa4.89□□□□□ -1.63
VMP1-213ENST00000591877 REG3GQ6UW15 175 aa4.89□□□□□ -1.63
VMP1-213ENST00000591877 BAALCQ8WXS3 180 aa4.89□□□□□ -1.63
VMP1-213ENST00000591877 TMEM70Q9BUB7 260 aa4.89□□□□□ -1.63
VMP1-213ENST00000591877 RPP21Q9H633 154 aaKnown RBP4.89□□□□□ -1.63
VMP1-213ENST00000591877 KLK12Q9UKR0 248 aa4.89□□□□□ -1.63
VMP1-213ENST00000591877 VPS13BQ7Z7G8 4022 aa4.88□□□□□ -1.63
VMP1-213ENST00000591877 DNAH8Q96JB1 4490 aa4.88□□□□□ -1.63
VMP1-213ENST00000591877 TRBV6-8A0A0A6YYG3 113 aa4.88□□□□□ -1.63
VMP1-213ENST00000591877 A8MWL6 223 aa4.88□□□□□ -1.63
VMP1-213ENST00000591877 P01737 135 aa4.88□□□□□ -1.63
VMP1-213ENST00000591877 IGLC6P0CF74 106 aa4.88□□□□□ -1.63
VMP1-213ENST00000591877 INAFM2P0DMQ5 153 aa4.88□□□□□ -1.63
VMP1-213ENST00000591877 ZNF56Q15929 161 aa4.88□□□□□ -1.63
VMP1-213ENST00000591877 RASL11AQ6T310 242 aa4.88□□□□□ -1.63
VMP1-213ENST00000591877 NTM-AS1Q6ZSK4 140 aa4.88□□□□□ -1.63
VMP1-213ENST00000591877 TSKUQ8WUA8 353 aa4.88□□□□□ -1.63
VMP1-213ENST00000591877 GFRA4Q9GZZ7 299 aa4.88□□□□□ -1.63
VMP1-213ENST00000591877 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.87□□□□□ -1.63
VMP1-213ENST00000591877 MT-ND6P03923 174 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms