RNA–Protein interactions for RNA: ENST00000590941.5

RUNDC3A-206, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-206ENST00000590941 CEND1Q8N111 149 aa18.42■□□□□ 0.54
RUNDC3A-206ENST00000590941 RNF183Q96D59 192 aa18.42■□□□□ 0.54
RUNDC3A-206ENST00000590941 TEP1Q99973 2627 aaKnown RBP18.42■□□□□ 0.54
RUNDC3A-206ENST00000590941 J3QQQ9 107 aa18.41■□□□□ 0.54
RUNDC3A-206ENST00000590941 TAX1BP3O14907 124 aa18.41■□□□□ 0.54
RUNDC3A-206ENST00000590941 FAM222AQ5U5X8 452 aa18.41■□□□□ 0.54
RUNDC3A-206ENST00000590941 SCGB1D4Q6XE38 83 aa18.41■□□□□ 0.54
RUNDC3A-206ENST00000590941 GCSHP23434 173 aa18.41■□□□□ 0.54
RUNDC3A-206ENST00000590941 TIRAPP58753 221 aa18.41■□□□□ 0.54
RUNDC3A-206ENST00000590941 TMEM101Q96IK0 257 aa18.41■□□□□ 0.54
RUNDC3A-206ENST00000590941 PRO0255Q9UI72 69 aa18.41■□□□□ 0.54
RUNDC3A-206ENST00000590941 H3BRM9 83 aa18.4■□□□□ 0.54
RUNDC3A-206ENST00000590941 UBE2D1P51668 147 aa18.4■□□□□ 0.54
RUNDC3A-206ENST00000590941 OR5A1Q8NGJ0 315 aa18.4■□□□□ 0.54
RUNDC3A-206ENST00000590941 A8MZ25 164 aa18.39■□□□□ 0.53
RUNDC3A-206ENST00000590941 EGFEM1PQ0D2K5 195 aa18.39■□□□□ 0.53
RUNDC3A-206ENST00000590941 AMMECR1LQ6DCA0 310 aa18.39■□□□□ 0.53
RUNDC3A-206ENST00000590941 HIST1H4GQ99525 98 aa18.39■□□□□ 0.53
RUNDC3A-206ENST00000590941 GEMIN7Q9H840 131 aaKnown RBP18.39■□□□□ 0.53
RUNDC3A-206ENST00000590941 IGHV4-28A0A0C4DH34 117 aa18.38■□□□□ 0.53
RUNDC3A-206ENST00000590941 TEX48A0A1B0GUV7 120 aa18.38■□□□□ 0.53
RUNDC3A-206ENST00000590941 FAM19A3Q7Z5A8 133 aa18.38■□□□□ 0.53
RUNDC3A-206ENST00000590941 NIPBLQ6KC79 2804 aaeCLIP18.38■□□□□ 0.53
RUNDC3A-206ENST00000590941 LOC100131303A0A0U1RQF7 123 aa18.38■□□□□ 0.53
RUNDC3A-206ENST00000590941 PTTG1IPP53801 180 aa18.37■□□□□ 0.53
RUNDC3A-206ENST00000590941 Q8NAQ8 132 aa18.37■□□□□ 0.53
RUNDC3A-206ENST00000590941 TRBV6-8A0A0A6YYG3 113 aa18.36■□□□□ 0.53
RUNDC3A-206ENST00000590941 HERVK_113P63121 156 aa18.36■□□□□ 0.53
RUNDC3A-206ENST00000590941 RNASE13Q5GAN3 156 aaKnown RBP18.35■□□□□ 0.53
RUNDC3A-206ENST00000590941 ATRQ13535 2644 aa18.35■□□□□ 0.53
RUNDC3A-206ENST00000590941 IGLV5-45A0A087WSX0 123 aa18.34■□□□□ 0.53
RUNDC3A-206ENST00000590941 DAD1P61803 113 aa18.34■□□□□ 0.53
RUNDC3A-206ENST00000590941 IGHV1-58A0A0C4DH39 117 aa18.34■□□□□ 0.53
RUNDC3A-206ENST00000590941 SMIM13P0DJ93 91 aa18.34■□□□□ 0.53
RUNDC3A-206ENST00000590941 CDC42SE2Q9NRR3 84 aa18.34■□□□□ 0.53
RUNDC3A-206ENST00000590941 SPANXB1Q9NS25 103 aaPredicted RBP18.34■□□□□ 0.53
RUNDC3A-206ENST00000590941 SPART-AS1P0CW21 52 aa18.33■□□□□ 0.52
RUNDC3A-206ENST00000590941 OXLD1Q5BKU9 147 aa18.33■□□□□ 0.52
RUNDC3A-206ENST00000590941 LINC00469Q8N7U9 141 aa18.33■□□□□ 0.52
RUNDC3A-206ENST00000590941 ATP6V0E2Q8NHE4 81 aa18.33■□□□□ 0.52
RUNDC3A-206ENST00000590941 GYPEP15421 78 aa18.32■□□□□ 0.52
RUNDC3A-206ENST00000590941 FXYD2P54710 66 aa18.32■□□□□ 0.52
RUNDC3A-206ENST00000590941 TSPEAR-AS2P59090 65 aa18.32■□□□□ 0.52
RUNDC3A-206ENST00000590941 TMEM238LA0A1B0GVL6 79 aa18.31■□□□□ 0.52
RUNDC3A-206ENST00000590941 A6NJY4 79 aa18.31■□□□□ 0.52
RUNDC3A-206ENST00000590941 PRIMA1Q86XR5 153 aa18.31■□□□□ 0.52
RUNDC3A-206ENST00000590941 NOTCH3Q9UM47 2321 aa18.31■□□□□ 0.52
RUNDC3A-206ENST00000590941 TENM1Q9UKZ4 2725 aa18.31■□□□□ 0.52
RUNDC3A-206ENST00000590941 A0A0J9YY99 117 aa18.31■□□□□ 0.52
RUNDC3A-206ENST00000590941 ATP5G1P05496 136 aa18.31■□□□□ 0.52
RUNDC3A-206ENST00000590941 PAX4O43316 350 aa18.3■□□□□ 0.52
RUNDC3A-206ENST00000590941 IGHV3-30-3P0DP02 117 aa18.3■□□□□ 0.52
RUNDC3A-206ENST00000590941 C9orf118A6NHY6 69 aa18.29■□□□□ 0.52
RUNDC3A-206ENST00000590941 SRSF9Q13242 221 aaKnown RBP eCLIP18.29■□□□□ 0.52
RUNDC3A-206ENST00000590941 VSIG2Q96IQ7 327 aa18.28■□□□□ 0.52
RUNDC3A-206ENST00000590941 KRTAP10-11P60412 298 aa18.27■□□□□ 0.52
RUNDC3A-206ENST00000590941 VAMP3Q15836 100 aa18.27■□□□□ 0.52
RUNDC3A-206ENST00000590941 CHCHD5Q9BSY4 110 aa18.27■□□□□ 0.52
RUNDC3A-206ENST00000590941 LINC00242Q5T6M2 205 aa18.26■□□□□ 0.51
RUNDC3A-206ENST00000590941 Q6ZVH6 145 aa18.26■□□□□ 0.51
RUNDC3A-206ENST00000590941 TRAV26-1A0A087WT03 109 aa18.25■□□□□ 0.51
RUNDC3A-206ENST00000590941 VWFP04275 2813 aa18.25■□□□□ 0.51
RUNDC3A-206ENST00000590941 UBE2V1Q13404 147 aa18.25■□□□□ 0.51
RUNDC3A-206ENST00000590941 NHP2Q9NX24 153 aaKnown RBP18.25■□□□□ 0.51
RUNDC3A-206ENST00000590941 IGHV3-64A0A075B6Q5 118 aa18.24■□□□□ 0.51
RUNDC3A-206ENST00000590941 TMEM238C9JI98 176 aa18.24■□□□□ 0.51
RUNDC3A-206ENST00000590941 GAGE6Q13070 117 aa18.24■□□□□ 0.51
RUNDC3A-206ENST00000590941 SH2D6Q7Z4S9 175 aa18.24■□□□□ 0.51
RUNDC3A-206ENST00000590941 CDKN2A-AS1Q9UH64 79 aa18.24■□□□□ 0.51
RUNDC3A-206ENST00000590941 DEFB4AO15263 64 aa18.23■□□□□ 0.51
RUNDC3A-206ENST00000590941 A0A1B0GWB2 263 aa18.22■□□□□ 0.51
RUNDC3A-206ENST00000590941 TRAV13-1A0A0B4J241 112 aa18.22■□□□□ 0.51
RUNDC3A-206ENST00000590941 ZFAND6Q6FIF0 208 aa18.22■□□□□ 0.51
RUNDC3A-206ENST00000590941 TRAV8-3A0A0A6YYJ7 113 aa18.21■□□□□ 0.51
RUNDC3A-206ENST00000590941 SPINK8P0C7L1 97 aa18.21■□□□□ 0.51
RUNDC3A-206ENST00000590941 CELA1Q9UNI1 258 aa18.21■□□□□ 0.51
RUNDC3A-206ENST00000590941 NDUFA12Q9UI09 145 aa18.2■□□□□ 0.5
RUNDC3A-206ENST00000590941 A0A1B0GUV1 79 aa18.19■□□□□ 0.5
RUNDC3A-206ENST00000590941 K7EP13 123 aa18.19■□□□□ 0.5
RUNDC3A-206ENST00000590941 C12orf74Q32Q52 190 aa18.19■□□□□ 0.5
RUNDC3A-206ENST00000590941 IGLV5-39A0A0G2JS06 123 aa18.18■□□□□ 0.5
RUNDC3A-206ENST00000590941 RAB37Q96AX2 223 aa18.18■□□□□ 0.5
RUNDC3A-206ENST00000590941 A0A0J9YXY3 114 aa18.18■□□□□ 0.5
RUNDC3A-206ENST00000590941 H3BUT2 72 aa18.17■□□□□ 0.5
RUNDC3A-206ENST00000590941 IGHV3-30P01768 117 aa18.17■□□□□ 0.5
RUNDC3A-206ENST00000590941 IGHV3-30-5P0DP03 117 aa18.17■□□□□ 0.5
RUNDC3A-206ENST00000590941 COX6A2Q02221 97 aa18.17■□□□□ 0.5
RUNDC3A-206ENST00000590941 MRPL23Q16540 153 aaKnown RBP18.17■□□□□ 0.5
RUNDC3A-206ENST00000590941 C10orf126Q8N4M7 172 aa18.17■□□□□ 0.5
RUNDC3A-206ENST00000590941 GTF2H5Q6ZYL4 71 aa18.16■□□□□ 0.5
RUNDC3A-206ENST00000590941 C11orf68Q9H3H3 251 aaKnown RBP18.16■□□□□ 0.5
RUNDC3A-206ENST00000590941 F5H768 121 aa18.15■□□□□ 0.5
RUNDC3A-206ENST00000590941 NDUFA1O15239 70 aa18.15■□□□□ 0.5
RUNDC3A-206ENST00000590941 TIMM17BO60830 172 aa18.15■□□□□ 0.5
RUNDC3A-206ENST00000590941 A0A1W2PPM0 123 aa18.14■□□□□ 0.49
RUNDC3A-206ENST00000590941 SAMD5Q5TGI4 173 aa18.14■□□□□ 0.49
RUNDC3A-206ENST00000590941 ICOSQ9Y6W8 199 aa18.14■□□□□ 0.49
RUNDC3A-206ENST00000590941 SMIM1B2RUZ4 78 aa18.13■□□□□ 0.49
RUNDC3A-206ENST00000590941 CCL25O15444 150 aa18.13■□□□□ 0.49
RUNDC3A-206ENST00000590941 IGLV4-60A0A075B6I1 120 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms