RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 COX11Q9Y6N1 276 aa12.79□□□□□ -0.36
DDX39A-214ENST00000590556 FA2HQ7L5A8 372 aa12.78□□□□□ -0.36
DDX39A-214ENST00000590556 C18orf32Q8TCD1 76 aa12.78□□□□□ -0.36
DDX39A-214ENST00000590556 C1orf43Q9BWL3 253 aa12.78□□□□□ -0.36
DDX39A-214ENST00000590556 CSDC2Q9Y534 153 aaKnown RBP12.78□□□□□ -0.36
DDX39A-214ENST00000590556 TRGC2P03986 189 aa12.77□□□□□ -0.37
DDX39A-214ENST00000590556 ZNF664Q8N3J9 261 aa12.77□□□□□ -0.37
DDX39A-214ENST00000590556 CDC42SE2Q9NRR3 84 aa12.77□□□□□ -0.37
DDX39A-214ENST00000590556 SPANXA1Q9NS26 97 aa12.77□□□□□ -0.37
DDX39A-214ENST00000590556 IGKV3OR2-268A0A0C4DH90 116 aa12.76□□□□□ -0.37
DDX39A-214ENST00000590556 G0S2P27469 103 aa12.76□□□□□ -0.37
DDX39A-214ENST00000590556 CYSLTR1Q9Y271 337 aa12.76□□□□□ -0.37
DDX39A-214ENST00000590556 TRAV8-4A0A0B4J246 113 aa12.75□□□□□ -0.37
DDX39A-214ENST00000590556 LINC01546A6NGU7 62 aa12.75□□□□□ -0.37
DDX39A-214ENST00000590556 C2orf66Q6UXQ4 117 aa12.75□□□□□ -0.37
DDX39A-214ENST00000590556 IGLV10-54A0A075B6I4 117 aa12.74□□□□□ -0.37
DDX39A-214ENST00000590556 FAT2Q9NYQ8 4349 aa12.74□□□□□ -0.37
DDX39A-214ENST00000590556 RAB5BP61020 215 aa12.73□□□□□ -0.37
DDX39A-214ENST00000590556 Q6ZUT4 128 aa12.73□□□□□ -0.37
DDX39A-214ENST00000590556 PYGO1Q9Y3Y4 419 aa12.73□□□□□ -0.37
DDX39A-214ENST00000590556 LINC00614P0C842 121 aa12.72□□□□□ -0.37
DDX39A-214ENST00000590556 RNASE13Q5GAN3 156 aaKnown RBP12.72□□□□□ -0.37
DDX39A-214ENST00000590556 OPRPNQ99935 248 aaPredicted RBP12.72□□□□□ -0.37
DDX39A-214ENST00000590556 AP5S1Q9NUS5 200 aa12.72□□□□□ -0.37
DDX39A-214ENST00000590556 A0A087WTM6 91 aa12.71□□□□□ -0.37
DDX39A-214ENST00000590556 EREGO14944 169 aa12.71□□□□□ -0.37
DDX39A-214ENST00000590556 MRPS36P82909 103 aaKnown RBP12.71□□□□□ -0.37
DDX39A-214ENST00000590556 MAPKAPK5-AS1Q8N8E1 139 aa12.71□□□□□ -0.37
DDX39A-214ENST00000590556 LINC00959A0A1B0GUT2 108 aa12.7□□□□□ -0.38
DDX39A-214ENST00000590556 KRTAP26-1Q6PEX3 210 aa12.7□□□□□ -0.38
DDX39A-214ENST00000590556 BAALCQ8WXS3 180 aa12.7□□□□□ -0.38
DDX39A-214ENST00000590556 FAM104AQ969W3 186 aa12.7□□□□□ -0.38
DDX39A-214ENST00000590556 TOMM6Q96B49 74 aa12.7□□□□□ -0.38
DDX39A-214ENST00000590556 URB1-AS1Q96HZ7 61 aa12.7□□□□□ -0.38
DDX39A-214ENST00000590556 A0A1B0GVY2 172 aa12.69□□□□□ -0.38
DDX39A-214ENST00000590556 LRCOL1A6NCL2 159 aa12.69□□□□□ -0.38
DDX39A-214ENST00000590556 IGLV4-3A0A075B6K6 122 aa12.68□□□□□ -0.38
DDX39A-214ENST00000590556 SS18Q15532 418 aa12.68□□□□□ -0.38
DDX39A-214ENST00000590556 BAGE3Q86Y29 109 aa12.68□□□□□ -0.38
DDX39A-214ENST00000590556 CHCHD10Q8WYQ3 142 aaPredicted RBP12.68□□□□□ -0.38
DDX39A-214ENST00000590556 TMEM141Q96I45 108 aa12.68□□□□□ -0.38
DDX39A-214ENST00000590556 GAGE12HA6NDE8 117 aa12.67□□□□□ -0.38
DDX39A-214ENST00000590556 LINC01549A6NIU2 74 aa12.67□□□□□ -0.38
DDX39A-214ENST00000590556 IGIPA6NJ69 53 aa12.67□□□□□ -0.38
DDX39A-214ENST00000590556 SCGB3A1Q96QR1 104 aa12.67□□□□□ -0.38
DDX39A-214ENST00000590556 TRAV13-1A0A0B4J241 112 aa12.66□□□□□ -0.38
DDX39A-214ENST00000590556 LECT2O14960 151 aa12.66□□□□□ -0.38
DDX39A-214ENST00000590556 CCL25O15444 150 aa12.66□□□□□ -0.38
DDX39A-214ENST00000590556 NPSP0C0P6 89 aa12.66□□□□□ -0.38
DDX39A-214ENST00000590556 CHCHD1Q96BP2 118 aaKnown RBP12.66□□□□□ -0.38
DDX39A-214ENST00000590556 TIMM17AQ99595 171 aa12.66□□□□□ -0.38
DDX39A-214ENST00000590556 IFITM10A6NMD0 228 aa12.65□□□□□ -0.38
DDX39A-214ENST00000590556 C1orf196B1AJZ1 125 aa12.65□□□□□ -0.38
DDX39A-214ENST00000590556 XCL1P47992 114 aa12.65□□□□□ -0.38
DDX39A-214ENST00000590556 WFDC2Q14508 124 aa12.65□□□□□ -0.38
DDX39A-214ENST00000590556 Q6ZN92 141 aa12.65□□□□□ -0.38
DDX39A-214ENST00000590556 ERASQ7Z444 233 aa12.65□□□□□ -0.38
DDX39A-214ENST00000590556 HECTD4Q9Y4D8 3996 aa12.64□□□□□ -0.39
DDX39A-214ENST00000590556 PKD1P98161 4303 aa12.64□□□□□ -0.39
DDX39A-214ENST00000590556 PMCHL1Q16048 86 aa12.64□□□□□ -0.39
DDX39A-214ENST00000590556 PAPPA-AS1Q5QFB9 102 aa12.64□□□□□ -0.39
DDX39A-214ENST00000590556 TEX43Q6ZNM6 134 aa12.64□□□□□ -0.39
DDX39A-214ENST00000590556 SPATA12Q7Z6I5 190 aa12.64□□□□□ -0.39
DDX39A-214ENST00000590556 VCX2Q9H322 139 aa12.64□□□□□ -0.39
DDX39A-214ENST00000590556 HBDP02042 147 aa12.63□□□□□ -0.39
DDX39A-214ENST00000590556 A0A096LNJ9 63 aa12.62□□□□□ -0.39
DDX39A-214ENST00000590556 USP17L23D6RBM5 183 aa12.62□□□□□ -0.39
DDX39A-214ENST00000590556 CD164L2Q6UWJ8 174 aa12.62□□□□□ -0.39
DDX39A-214ENST00000590556 Q8N814 137 aa12.62□□□□□ -0.39
DDX39A-214ENST00000590556 C2orf88Q9BSF0 95 aa12.62□□□□□ -0.39
DDX39A-214ENST00000590556 FOXI1Q12951 378 aa12.61□□□□□ -0.39
DDX39A-214ENST00000590556 ZC2HC1BQ5TFG8 222 aa12.61□□□□□ -0.39
DDX39A-214ENST00000590556 AMELXQ99217 191 aa12.61□□□□□ -0.39
DDX39A-214ENST00000590556 DNAH11Q96DT5 4516 aa12.6□□□□□ -0.39
DDX39A-214ENST00000590556 KRTAP10-2P60368 255 aa12.6□□□□□ -0.39
DDX39A-214ENST00000590556 C14orf177Q52M58 125 aa12.6□□□□□ -0.39
DDX39A-214ENST00000590556 LINC00173Q6ZV60 143 aa12.6□□□□□ -0.39
DDX39A-214ENST00000590556 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.59□□□□□ -0.39
DDX39A-214ENST00000590556 HSBP1O75506 76 aa12.59□□□□□ -0.39
DDX39A-214ENST00000590556 SERF1AO75920 110 aa12.59□□□□□ -0.39
DDX39A-214ENST00000590556 PDZD11Q5EBL8 140 aa12.59□□□□□ -0.39
DDX39A-214ENST00000590556 PGPEP1Q9NXJ5 209 aa12.59□□□□□ -0.39
DDX39A-214ENST00000590556 HIST1H2BKO60814 126 aa12.58□□□□□ -0.4
DDX39A-214ENST00000590556 HIST1H2BJP06899 126 aa12.58□□□□□ -0.4
DDX39A-214ENST00000590556 HIST1H2BOP23527 126 aa12.58□□□□□ -0.4
DDX39A-214ENST00000590556 HIST1H2BBP33778 126 aa12.58□□□□□ -0.4
DDX39A-214ENST00000590556 HIST1H2BDP58876 126 aa12.58□□□□□ -0.4
DDX39A-214ENST00000590556 HIST1H2BCP62807 126 aa12.58□□□□□ -0.4
DDX39A-214ENST00000590556 HIST2H2BEQ16778 126 aa12.58□□□□□ -0.4
DDX39A-214ENST00000590556 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.58□□□□□ -0.4
DDX39A-214ENST00000590556 CFAP161Q6P656 301 aa12.58□□□□□ -0.4
DDX39A-214ENST00000590556 HIST1H2BHQ93079 126 aa12.58□□□□□ -0.4
DDX39A-214ENST00000590556 HIST1H2BNQ99877 126 aa12.58□□□□□ -0.4
DDX39A-214ENST00000590556 HIST1H2BMQ99879 126 aa12.58□□□□□ -0.4
DDX39A-214ENST00000590556 FUSP35637 526 aaKnown RBP eCLIP12.57□□□□□ -0.4
DDX39A-214ENST00000590556 UBE2D1P51668 147 aa12.57□□□□□ -0.4
DDX39A-214ENST00000590556 NTN5Q8WTR8 489 aaPredicted RBP12.57□□□□□ -0.4
DDX39A-214ENST00000590556 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.56□□□□□ -0.4
DDX39A-214ENST00000590556 COX7A2LO14548 114 aa12.56□□□□□ -0.4
DDX39A-214ENST00000590556 ATP5LO75964 103 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms