RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 APOC4P55056 127 aa10.7□□□□□ -0.7
RETREG3-208ENST00000589797 TRAV25A0A0B4J276 109 aa10.69□□□□□ -0.7
RETREG3-208ENST00000589797 CRIP2P52943 208 aaPredicted RBP10.69□□□□□ -0.7
RETREG3-208ENST00000589797 HERVK_113P63121 156 aa10.69□□□□□ -0.7
RETREG3-208ENST00000589797 S100A7L2Q5SY68 101 aa10.69□□□□□ -0.7
RETREG3-208ENST00000589797 LEPROTO15243 131 aa10.69□□□□□ -0.7
RETREG3-208ENST00000589797 NDUFA7O95182 113 aa10.69□□□□□ -0.7
RETREG3-208ENST00000589797 PTH2Q96A98 100 aa10.69□□□□□ -0.7
RETREG3-208ENST00000589797 POLR2KP53803 58 aaKnown RBP10.69□□□□□ -0.7
RETREG3-208ENST00000589797 SPANXA1Q9NS26 97 aa10.69□□□□□ -0.7
RETREG3-208ENST00000589797 IGLV4-3A0A075B6K6 122 aa10.68□□□□□ -0.7
RETREG3-208ENST00000589797 C9orf66Q5T8R8 295 aa10.68□□□□□ -0.7
RETREG3-208ENST00000589797 UBE2WQ96B02 151 aa10.68□□□□□ -0.7
RETREG3-208ENST00000589797 VSIG2Q96IQ7 327 aa10.68□□□□□ -0.7
RETREG3-208ENST00000589797 Q9UF83 564 aa10.67□□□□□ -0.7
RETREG3-208ENST00000589797 FAM222AQ5U5X8 452 aa10.67□□□□□ -0.7
RETREG3-208ENST00000589797 CFC1BP0CG36 223 aa10.67□□□□□ -0.7
RETREG3-208ENST00000589797 CFC1P0CG37 223 aa10.67□□□□□ -0.7
RETREG3-208ENST00000589797 RBMY1BA6NDE4 496 aaKnown RBP10.66□□□□□ -0.7
RETREG3-208ENST00000589797 RBMY1EA6NEQ0 496 aaKnown RBP10.66□□□□□ -0.7
RETREG3-208ENST00000589797 IGHV3-30P01768 117 aa10.66□□□□□ -0.7
RETREG3-208ENST00000589797 IGHV3-33P01772 117 aa10.66□□□□□ -0.7
RETREG3-208ENST00000589797 RBMY1DP0C7P1 496 aaKnown RBP10.66□□□□□ -0.7
RETREG3-208ENST00000589797 RBMY1A1P0DJD3 496 aaKnown RBP10.66□□□□□ -0.7
RETREG3-208ENST00000589797 RBMY1CP0DJD4 496 aa10.66□□□□□ -0.7
RETREG3-208ENST00000589797 IGHV3-30-5P0DP03 117 aa10.66□□□□□ -0.7
RETREG3-208ENST00000589797 FAM110AQ9BQ89 295 aa10.66□□□□□ -0.7
RETREG3-208ENST00000589797 Q9HAA7 133 aa10.66□□□□□ -0.7
RETREG3-208ENST00000589797 TRBV27A0A0K0K1C4 114 aa10.66□□□□□ -0.7
RETREG3-208ENST00000589797 TAL2Q16559 108 aa10.66□□□□□ -0.7
RETREG3-208ENST00000589797 RNF152Q8N8N0 203 aa10.66□□□□□ -0.7
RETREG3-208ENST00000589797 SIGMAR1Q99720 223 aa10.66□□□□□ -0.7
RETREG3-208ENST00000589797 CELSR2Q9HCU4 2923 aa10.66□□□□□ -0.7
RETREG3-208ENST00000589797 IGHV4-4A0A075B6R2 117 aa10.65□□□□□ -0.7
RETREG3-208ENST00000589797 C9orf85Q96MD7 179 aa10.65□□□□□ -0.7
RETREG3-208ENST00000589797 ODF3Q96PU9 254 aa10.65□□□□□ -0.7
RETREG3-208ENST00000589797 TSHBP01222 138 aa10.65□□□□□ -0.7
RETREG3-208ENST00000589797 ZNF22P17026 224 aaPredicted RBP10.65□□□□□ -0.7
RETREG3-208ENST00000589797 ATXN8Q156A1 80 aa10.65□□□□□ -0.7
RETREG3-208ENST00000589797 PRB2P02812 416 aaPredicted RBP10.65□□□□□ -0.71
RETREG3-208ENST00000589797 DAZ2Q13117 558 aaKnown RBP10.65□□□□□ -0.71
RETREG3-208ENST00000589797 TTC32Q5I0X7 151 aa10.65□□□□□ -0.71
RETREG3-208ENST00000589797 DAZ4Q86SG3 579 aaKnown RBP10.65□□□□□ -0.71
RETREG3-208ENST00000589797 DAZ3Q9NR90 486 aaKnown RBP10.65□□□□□ -0.71
RETREG3-208ENST00000589797 ZNF580Q9UK33 172 aa10.65□□□□□ -0.71
RETREG3-208ENST00000589797 Q6ZSN1 163 aa10.64□□□□□ -0.71
RETREG3-208ENST00000589797 HIGD1BQ9P298 99 aa10.64□□□□□ -0.71
RETREG3-208ENST00000589797 HILS1P60008 231 aa10.63□□□□□ -0.71
RETREG3-208ENST00000589797 DNAJC30Q96LL9 226 aa10.63□□□□□ -0.71
RETREG3-208ENST00000589797 HRNRQ86YZ3 2850 aaPredicted RBP10.63□□□□□ -0.71
RETREG3-208ENST00000589797 COX8CQ7Z4L0 72 aa10.63□□□□□ -0.71
RETREG3-208ENST00000589797 TRAV26-1A0A087WT03 109 aa10.63□□□□□ -0.71
RETREG3-208ENST00000589797 FBN2P35556 2912 aa10.63□□□□□ -0.71
RETREG3-208ENST00000589797 TSPAN13O95857 204 aa10.62□□□□□ -0.71
RETREG3-208ENST00000589797 RBMY1FQ15415 496 aaKnown RBP10.62□□□□□ -0.71
RETREG3-208ENST00000589797 OXLD1Q5BKU9 147 aa10.62□□□□□ -0.71
RETREG3-208ENST00000589797 NTN5Q8WTR8 489 aaPredicted RBP10.62□□□□□ -0.71
RETREG3-208ENST00000589797 KLK12Q9UKR0 248 aa10.62□□□□□ -0.71
RETREG3-208ENST00000589797 SLC25A20O43772 301 aa10.62□□□□□ -0.71
RETREG3-208ENST00000589797 ATP5G1P05496 136 aa10.61□□□□□ -0.71
RETREG3-208ENST00000589797 SPART-AS1P0CW21 52 aa10.61□□□□□ -0.71
RETREG3-208ENST00000589797 C10orf126Q8N4M7 172 aa10.61□□□□□ -0.71
RETREG3-208ENST00000589797 IGHV1-58A0A0C4DH39 117 aa10.6□□□□□ -0.71
RETREG3-208ENST00000589797 C1orf158Q8N1D5 194 aa10.6□□□□□ -0.71
RETREG3-208ENST00000589797 IGLV2-18A0A075B6J9 118 aa10.6□□□□□ -0.71
RETREG3-208ENST00000589797 TRAV4A0A0B4J268 109 aa10.6□□□□□ -0.71
RETREG3-208ENST00000589797 F8W1H4 67 aa10.6□□□□□ -0.71
RETREG3-208ENST00000589797 NFE4Q86UQ8 179 aa10.6□□□□□ -0.71
RETREG3-208ENST00000589797 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.6□□□□□ -0.71
RETREG3-208ENST00000589797 TRAV8-4A0A0B4J246 113 aa10.59□□□□□ -0.71
RETREG3-208ENST00000589797 A0A0J9YXY3 114 aa10.59□□□□□ -0.71
RETREG3-208ENST00000589797 ZNF561-AS1K7EIQ3 104 aa10.59□□□□□ -0.71
RETREG3-208ENST00000589797 CLEC2BQ92478 149 aa10.59□□□□□ -0.71
RETREG3-208ENST00000589797 LINC00526Q96FQ7 95 aa10.59□□□□□ -0.71
RETREG3-208ENST00000589797 IGIPA6NJ69 53 aa10.59□□□□□ -0.71
RETREG3-208ENST00000589797 SCGB1A1P11684 91 aa10.59□□□□□ -0.71
RETREG3-208ENST00000589797 PRO0255Q9UI72 69 aa10.59□□□□□ -0.71
RETREG3-208ENST00000589797 TRBV20-1A0A075B6N2 111 aa10.58□□□□□ -0.72
RETREG3-208ENST00000589797 EDA2RQ9HAV5 297 aa10.58□□□□□ -0.72
RETREG3-208ENST00000589797 RS1O15537 224 aa10.58□□□□□ -0.72
RETREG3-208ENST00000589797 NDUFA11Q86Y39 141 aa10.58□□□□□ -0.72
RETREG3-208ENST00000589797 CARD19Q96LW7 228 aa10.58□□□□□ -0.72
RETREG3-208ENST00000589797 MIR7-3HGQ8N6C7 128 aa10.57□□□□□ -0.72
RETREG3-208ENST00000589797 TRBV6-5A0A0K0K1A5 114 aa10.57□□□□□ -0.72
RETREG3-208ENST00000589797 LINC00269Q8N2A0 174 aa10.57□□□□□ -0.72
RETREG3-208ENST00000589797 IGKV2D-24A0A075B6R9 120 aa10.57□□□□□ -0.72
RETREG3-208ENST00000589797 SVEP1Q4LDE5 3571 aa10.56□□□□□ -0.72
RETREG3-208ENST00000589797 TRBV10-1A0A0K0K1A3 114 aa10.56□□□□□ -0.72
RETREG3-208ENST00000589797 CSMD1Q96PZ7 3565 aa10.56□□□□□ -0.72
RETREG3-208ENST00000589797 PIK3CD-AS1Q5SR53 167 aa10.56□□□□□ -0.72
RETREG3-208ENST00000589797 SND1-IT1Q9HBX3 110 aa10.56□□□□□ -0.72
RETREG3-208ENST00000589797 LINC00694P0DN24 101 aa10.56□□□□□ -0.72
RETREG3-208ENST00000589797 ZMAT4Q9H898 229 aa10.56□□□□□ -0.72
RETREG3-208ENST00000589797 MRPL23Q16540 153 aaKnown RBP10.55□□□□□ -0.72
RETREG3-208ENST00000589797 TM2D2Q9BX73 214 aa10.55□□□□□ -0.72
RETREG3-208ENST00000589797 TMEM223A0PJW6 202 aa10.55□□□□□ -0.72
RETREG3-208ENST00000589797 GAGE2AQ6NT46 116 aa10.55□□□□□ -0.72
RETREG3-208ENST00000589797 UBE2DNLQ8IWF7 75 aa10.55□□□□□ -0.72
RETREG3-208ENST00000589797 CUBNO60494 3623 aa10.55□□□□□ -0.72
RETREG3-208ENST00000589797 COX7B2Q8TF08 81 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms