RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 PPP1R2P9O14990 202 aa9.35□□□□□ -0.91
SF3A2-204ENST00000589118 TWIST1Q15672 202 aa9.35□□□□□ -0.91
SF3A2-204ENST00000589118 SPINK6Q6UWN8 80 aa9.35□□□□□ -0.91
SF3A2-204ENST00000589118 NIT2Q9NQR4 276 aa9.35□□□□□ -0.91
SF3A2-204ENST00000589118 TRAV8-4A0A0B4J246 113 aa9.34□□□□□ -0.91
SF3A2-204ENST00000589118 MT-ND4LP03901 98 aa9.34□□□□□ -0.91
SF3A2-204ENST00000589118 RPS10P46783 165 aaKnown RBP9.34□□□□□ -0.91
SF3A2-204ENST00000589118 REG3GQ6UW15 175 aa9.34□□□□□ -0.91
SF3A2-204ENST00000589118 PGLYRP4Q96LB8 373 aa9.34□□□□□ -0.91
SF3A2-204ENST00000589118 CARHSP1Q9Y2V2 147 aaKnown RBP9.34□□□□□ -0.91
SF3A2-204ENST00000589118 V9GYV3 84 aa9.34□□□□□ -0.91
SF3A2-204ENST00000589118 HIGD1CA8MV81 97 aa9.33□□□□□ -0.92
SF3A2-204ENST00000589118 LINC00526Q96FQ7 95 aa9.33□□□□□ -0.92
SF3A2-204ENST00000589118 C10orf91Q5T1B1 145 aa9.32□□□□□ -0.92
SF3A2-204ENST00000589118 SMIM15Q7Z3B0 74 aa9.32□□□□□ -0.92
SF3A2-204ENST00000589118 SLC7A5P1Q8MH63 180 aa9.32□□□□□ -0.92
SF3A2-204ENST00000589118 GATD1Q8NB37 220 aa9.32□□□□□ -0.92
SF3A2-204ENST00000589118 BORCS7Q96B45 105 aa9.32□□□□□ -0.92
SF3A2-204ENST00000589118 ANAPC16Q96DE5 110 aa9.32□□□□□ -0.92
SF3A2-204ENST00000589118 A0A1B0GUT8 65 aa9.31□□□□□ -0.92
SF3A2-204ENST00000589118 APOC3P02656 99 aa9.31□□□□□ -0.92
SF3A2-204ENST00000589118 SVBPQ8N300 66 aa9.31□□□□□ -0.92
SF3A2-204ENST00000589118 TMEM243Q9BU79 118 aa9.31□□□□□ -0.92
SF3A2-204ENST00000589118 A0A1B0GUV1 79 aa9.3□□□□□ -0.92
SF3A2-204ENST00000589118 RHEBQ15382 184 aa9.3□□□□□ -0.92
SF3A2-204ENST00000589118 TMEM191AQ9H0A3 160 aa9.3□□□□□ -0.92
SF3A2-204ENST00000589118 SNAPINO95295 136 aa9.29□□□□□ -0.92
SF3A2-204ENST00000589118 CTDSP1Q9GZU7 261 aa9.29□□□□□ -0.92
SF3A2-204ENST00000589118 NAT8BQ9UHF3 227 aa9.29□□□□□ -0.92
SF3A2-204ENST00000589118 TRAV26-2A0A0B4J265 109 aa9.28□□□□□ -0.92
SF3A2-204ENST00000589118 TRBV6-5A0A0K0K1A5 114 aa9.28□□□□□ -0.92
SF3A2-204ENST00000589118 SMIM27A0A1W2PRY6 76 aa9.28□□□□□ -0.92
SF3A2-204ENST00000589118 NUP35Q8NFH5 326 aa9.28□□□□□ -0.92
SF3A2-204ENST00000589118 NCR2O95944 276 aa9.27□□□□□ -0.93
SF3A2-204ENST00000589118 CHCHD10Q8WYQ3 142 aaPredicted RBP9.27□□□□□ -0.93
SF3A2-204ENST00000589118 C7orf77A4D0Y5 90 aa9.26□□□□□ -0.93
SF3A2-204ENST00000589118 UBE2L6O14933 153 aa9.26□□□□□ -0.93
SF3A2-204ENST00000589118 RIGQ13278 110 aa9.26□□□□□ -0.93
SF3A2-204ENST00000589118 COTL1Q14019 142 aa9.26□□□□□ -0.93
SF3A2-204ENST00000589118 CFAP161Q6P656 301 aa9.26□□□□□ -0.93
SF3A2-204ENST00000589118 Q6ZRP5 223 aa9.26□□□□□ -0.93
SF3A2-204ENST00000589118 RPL39LQ96EH5 51 aaKnown RBP9.26□□□□□ -0.93
SF3A2-204ENST00000589118 RPS10P5Q9NQ39 176 aa9.26□□□□□ -0.93
SF3A2-204ENST00000589118 A0A1B0GW15 77 aa9.25□□□□□ -0.93
SF3A2-204ENST00000589118 RAB4AP20338 218 aa9.25□□□□□ -0.93
SF3A2-204ENST00000589118 S100PP25815 95 aa9.25□□□□□ -0.93
SF3A2-204ENST00000589118 AMTP48728 403 aa9.25□□□□□ -0.93
SF3A2-204ENST00000589118 MRAP2Q96G30 205 aa9.25□□□□□ -0.93
SF3A2-204ENST00000589118 GVQW2A0A096LPI5 108 aaPredicted RBP9.24□□□□□ -0.93
SF3A2-204ENST00000589118 SDHAF1A6NFY7 115 aa9.24□□□□□ -0.93
SF3A2-204ENST00000589118 PRR26Q8N8Z3 221 aa9.24□□□□□ -0.93
SF3A2-204ENST00000589118 IMMP2LQ96T52 175 aa9.24□□□□□ -0.93
SF3A2-204ENST00000589118 TMEM242Q9NWH2 141 aa9.24□□□□□ -0.93
SF3A2-204ENST00000589118 H7C423 109 aa9.23□□□□□ -0.93
SF3A2-204ENST00000589118 S100A8P05109 93 aa9.23□□□□□ -0.93
SF3A2-204ENST00000589118 FOXI1Q12951 378 aa9.23□□□□□ -0.93
SF3A2-204ENST00000589118 AMN1Q8IY45 258 aa9.23□□□□□ -0.93
SF3A2-204ENST00000589118 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.22□□□□□ -0.93
SF3A2-204ENST00000589118 TRBV27A0A0K0K1C4 114 aa9.22□□□□□ -0.93
SF3A2-204ENST00000589118 A0A1W2PNN7 141 aa9.22□□□□□ -0.93
SF3A2-204ENST00000589118 IGKV2-29A2NJV5 120 aaPredicted RBP9.22□□□□□ -0.93
SF3A2-204ENST00000589118 PPP1R17O96001 155 aa9.22□□□□□ -0.93
SF3A2-204ENST00000589118 POLR2KP53803 58 aaKnown RBP9.22□□□□□ -0.93
SF3A2-204ENST00000589118 ATP5L2Q7Z4Y8 100 aa9.22□□□□□ -0.93
SF3A2-204ENST00000589118 TRAV9-1A0A075B6T8 112 aa9.21□□□□□ -0.94
SF3A2-204ENST00000589118 I3L3M4 83 aa9.21□□□□□ -0.94
SF3A2-204ENST00000589118 GAGE2BQ13066 116 aa9.21□□□□□ -0.94
SF3A2-204ENST00000589118 FAM104BQ5XKR9 115 aa9.21□□□□□ -0.94
SF3A2-204ENST00000589118 MRPL54Q6P161 138 aaKnown RBP9.21□□□□□ -0.94
SF3A2-204ENST00000589118 BTF3L4Q96K17 158 aa9.21□□□□□ -0.94
SF3A2-204ENST00000589118 ST20Q9HBF5 79 aa9.21□□□□□ -0.94
SF3A2-204ENST00000589118 A0A1B0GXF2 115 aa9.2□□□□□ -0.94
SF3A2-204ENST00000589118 XCL1P47992 114 aa9.2□□□□□ -0.94
SF3A2-204ENST00000589118 HBBP68871 147 aa9.2□□□□□ -0.94
SF3A2-204ENST00000589118 RNASEKQ6P5S7 137 aaKnown RBP9.2□□□□□ -0.94
SF3A2-204ENST00000589118 PSORS1C2Q9UIG4 136 aa9.2□□□□□ -0.94
SF3A2-204ENST00000589118 KRTAP9-6A0A140TA67 174 aa9.19□□□□□ -0.94
SF3A2-204ENST00000589118 APCSP02743 223 aa9.19□□□□□ -0.94
SF3A2-204ENST00000589118 ESDP10768 282 aa9.19□□□□□ -0.94
SF3A2-204ENST00000589118 CAMPP49913 170 aa9.19□□□□□ -0.94
SF3A2-204ENST00000589118 AMMECR1LQ6DCA0 310 aa9.19□□□□□ -0.94
SF3A2-204ENST00000589118 NRACQ8N912 160 aa9.19□□□□□ -0.94
SF3A2-204ENST00000589118 CARD19Q96LW7 228 aa9.19□□□□□ -0.94
SF3A2-204ENST00000589118 FAT4Q6V0I7 4981 aa9.18□□□□□ -0.94
SF3A2-204ENST00000589118 TRBV24-1A0A075B6N3 115 aa9.18□□□□□ -0.94
SF3A2-204ENST00000589118 TSHBP01222 138 aa9.18□□□□□ -0.94
SF3A2-204ENST00000589118 ZNF25P17030 456 aaPredicted RBP9.18□□□□□ -0.94
SF3A2-204ENST00000589118 PMCHP20382 165 aa9.18□□□□□ -0.94
SF3A2-204ENST00000589118 MRPL51Q4U2R6 128 aaKnown RBP9.18□□□□□ -0.94
SF3A2-204ENST00000589118 LINC00474Q9P2X8 69 aa9.18□□□□□ -0.94
SF3A2-204ENST00000589118 CCL25O15444 150 aa9.17□□□□□ -0.94
SF3A2-204ENST00000589118 ATP6V1G1O75348 118 aa9.17□□□□□ -0.94
SF3A2-204ENST00000589118 RPL32P62910 135 aaKnown RBP9.17□□□□□ -0.94
SF3A2-204ENST00000589118 VCYO14598 125 aa9.16□□□□□ -0.94
SF3A2-204ENST00000589118 FGF6P10767 208 aa9.16□□□□□ -0.94
SF3A2-204ENST00000589118 S100A1P23297 94 aa9.16□□□□□ -0.94
SF3A2-204ENST00000589118 PTTG1IPP53801 180 aa9.16□□□□□ -0.94
SF3A2-204ENST00000589118 SUMO2P61956 95 aaKnown RBP9.16□□□□□ -0.94
SF3A2-204ENST00000589118 SYCNQ0VAF6 134 aa9.16□□□□□ -0.94
SF3A2-204ENST00000589118 C1orf137Q5JT78 98 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms