RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 MMGT1Q8N4V1 131 aa0.3□□□□□ -2.36
SMAD4-207ENST00000589076 ERG28Q9UKR5 140 aa0.3□□□□□ -2.36
SMAD4-207ENST00000589076 LSM2Q9Y333 95 aaKnown RBP0.3□□□□□ -2.36
SMAD4-207ENST00000589076 MYO7AQ13402 2215 aa0.3□□□□□ -2.36
SMAD4-207ENST00000589076 COL14A1Q05707 1796 aaKnown RBP0.29□□□□□ -2.36
SMAD4-207ENST00000589076 RB1CC1Q8TDY2 1594 aa0.29□□□□□ -2.36
SMAD4-207ENST00000589076 LPAP08519 4548 aa0.29□□□□□ -2.36
SMAD4-207ENST00000589076 TFF1P04155 84 aa0.29□□□□□ -2.36
SMAD4-207ENST00000589076 SLC25A6P12236 298 aa0.29□□□□□ -2.36
SMAD4-207ENST00000589076 NCS1P62166 190 aa0.29□□□□□ -2.36
SMAD4-207ENST00000589076 OR2T2Q6IF00 324 aa0.29□□□□□ -2.36
SMAD4-207ENST00000589076 CYP2G1PQ6ZSU1 146 aa0.29□□□□□ -2.36
SMAD4-207ENST00000589076 MUC22E2RYF6 1773 aaPredicted RBP0.29□□□□□ -2.36
SMAD4-207ENST00000589076 UNC13BO14795 1591 aa0.28□□□□□ -2.36
SMAD4-207ENST00000589076 ARHGEF10O15013 1369 aa0.28□□□□□ -2.36
SMAD4-207ENST00000589076 CDK13Q14004 1512 aaKnown RBP0.28□□□□□ -2.37
SMAD4-207ENST00000589076 LAMC1P11047 1609 aa0.27□□□□□ -2.37
SMAD4-207ENST00000589076 ARFGEF1Q9Y6D6 1849 aa0.27□□□□□ -2.37
SMAD4-207ENST00000589076 TRBV20-1A0A075B6N2 111 aa0.27□□□□□ -2.37
SMAD4-207ENST00000589076 F2Z2F3 143 aa0.27□□□□□ -2.37
SMAD4-207ENST00000589076 ELOF1P60002 83 aaKnown RBP0.27□□□□□ -2.37
SMAD4-207ENST00000589076 EMX2Q04743 252 aa0.27□□□□□ -2.37
SMAD4-207ENST00000589076 PRR15LQ9BU68 103 aa0.27□□□□□ -2.37
SMAD4-207ENST00000589076 PROK2Q9HC23 129 aa0.27□□□□□ -2.37
SMAD4-207ENST00000589076 DISP2A7MBM2 1401 aa0.27□□□□□ -2.37
SMAD4-207ENST00000589076 TNXBP22105 4242 aa0.26□□□□□ -2.37
SMAD4-207ENST00000589076 RBAKDNA6NC62 111 aa0.26□□□□□ -2.37
SMAD4-207ENST00000589076 VMO1Q7Z5L0 202 aa0.26□□□□□ -2.37
SMAD4-207ENST00000589076 IFI27L1Q96BM0 104 aa0.26□□□□□ -2.37
SMAD4-207ENST00000589076 BPESC1Q9GZL8 116 aa0.26□□□□□ -2.37
SMAD4-207ENST00000589076 BATF3Q9NR55 127 aa0.26□□□□□ -2.37
SMAD4-207ENST00000589076 GSKIPQ9P0R6 139 aa0.26□□□□□ -2.37
SMAD4-207ENST00000589076 C10orf71Q711Q0 1435 aa0.26□□□□□ -2.37
SMAD4-207ENST00000589076 ABCC10Q5T3U5 1492 aa0.26□□□□□ -2.37
SMAD4-207ENST00000589076 ADGRB1O14514 1584 aa0.26□□□□□ -2.37
SMAD4-207ENST00000589076 CUL7Q14999 1698 aa0.26□□□□□ -2.37
SMAD4-207ENST00000589076 SIPA1L3O60292 1781 aaPredicted RBP0.26□□□□□ -2.37
SMAD4-207ENST00000589076 DNAH6Q9C0G6 4158 aa0.26□□□□□ -2.37
SMAD4-207ENST00000589076 ZC3H13Q5T200 1668 aaKnown RBP0.25□□□□□ -2.37
SMAD4-207ENST00000589076 SHROOM2Q13796 1616 aa0.25□□□□□ -2.37
SMAD4-207ENST00000589076 MADDQ8WXG6 1647 aa0.25□□□□□ -2.37
SMAD4-207ENST00000589076 SOGA1O94964 1423 aa0.25□□□□□ -2.37
SMAD4-207ENST00000589076 LCE6AA0A183 80 aa0.25□□□□□ -2.37
SMAD4-207ENST00000589076 ARPC5O15511 151 aa0.25□□□□□ -2.37
SMAD4-207ENST00000589076 CKS1BP61024 79 aa0.25□□□□□ -2.37
SMAD4-207ENST00000589076 HIST1H1AQ02539 215 aaPredicted RBP0.25□□□□□ -2.37
SMAD4-207ENST00000589076 LZICQ8WZA0 190 aa0.25□□□□□ -2.37
SMAD4-207ENST00000589076 SAR1AQ9NR31 198 aa0.25□□□□□ -2.37
SMAD4-207ENST00000589076 SPEF2Q9C093 1822 aa0.24□□□□□ -2.37
SMAD4-207ENST00000589076 PRG4Q92954 1404 aaPredicted RBP0.24□□□□□ -2.37
SMAD4-207ENST00000589076 NCR2O95944 276 aa0.24□□□□□ -2.37
SMAD4-207ENST00000589076 TSPAN19P0C672 248 aa0.24□□□□□ -2.37
SMAD4-207ENST00000589076 IGLC6P0CF74 106 aa0.24□□□□□ -2.37
SMAD4-207ENST00000589076 CCL3L1P16619 93 aa0.24□□□□□ -2.37
SMAD4-207ENST00000589076 VSTM2AQ8TAG5 236 aa0.24□□□□□ -2.37
SMAD4-207ENST00000589076 DNAH10Q8IVF4 4471 aa0.24□□□□□ -2.37
SMAD4-207ENST00000589076 PREX1Q8TCU6 1659 aa0.24□□□□□ -2.37
SMAD4-207ENST00000589076 KIF21BO75037 1637 aa0.24□□□□□ -2.37
SMAD4-207ENST00000589076 DOCK11Q5JSL3 2073 aa0.23□□□□□ -2.37
SMAD4-207ENST00000589076 J3QR89 54 aa0.23□□□□□ -2.37
SMAD4-207ENST00000589076 COX4I1P13073 169 aa0.23□□□□□ -2.37
SMAD4-207ENST00000589076 SSBP1Q04837 148 aaKnown RBP0.23□□□□□ -2.37
SMAD4-207ENST00000589076 FAM74A4Q5TZK3 123 aa0.23□□□□□ -2.37
SMAD4-207ENST00000589076 LINC01545Q5VT33 79 aa0.23□□□□□ -2.37
SMAD4-207ENST00000589076 SMIM3Q9BZL3 60 aa0.23□□□□□ -2.37
SMAD4-207ENST00000589076 PAPPA2Q9BXP8 1791 aa0.23□□□□□ -2.37
SMAD4-207ENST00000589076 PLCE1Q9P212 2302 aa0.22□□□□□ -2.37
SMAD4-207ENST00000589076 FHAD1B1AJZ9 1412 aa0.22□□□□□ -2.37
SMAD4-207ENST00000589076 PPIP5K1Q6PFW1 1433 aa0.22□□□□□ -2.37
SMAD4-207ENST00000589076 A0A087WTM6 91 aa0.22□□□□□ -2.37
SMAD4-207ENST00000589076 TRAV12-3A0A0B4J271 114 aa0.22□□□□□ -2.37
SMAD4-207ENST00000589076 FAM236AA0A1B0GUQ0 79 aa0.22□□□□□ -2.37
SMAD4-207ENST00000589076 FAM236BA0A1B0GV22 79 aa0.22□□□□□ -2.37
SMAD4-207ENST00000589076 NPC2P61916 151 aa0.22□□□□□ -2.37
SMAD4-207ENST00000589076 SPCS2Q15005 226 aa0.22□□□□□ -2.37
SMAD4-207ENST00000589076 SPANXN1Q5VSR9 72 aa0.22□□□□□ -2.37
SMAD4-207ENST00000589076 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.22□□□□□ -2.37
SMAD4-207ENST00000589076 CTAGE3PQ8IX95 158 aa0.22□□□□□ -2.37
SMAD4-207ENST00000589076 SMIM11BQ8TCY0 68 aa0.22□□□□□ -2.37
SMAD4-207ENST00000589076 NDUFA12Q9UI09 145 aa0.22□□□□□ -2.37
SMAD4-207ENST00000589076 MYH9P35579 1960 aaKnown RBP0.21□□□□□ -2.38
SMAD4-207ENST00000589076 MYH8P13535 1937 aa0.21□□□□□ -2.38
SMAD4-207ENST00000589076 LRRC37A3O60309 1634 aa0.21□□□□□ -2.38
SMAD4-207ENST00000589076 ALX1Q15699 326 aa0.21□□□□□ -2.38
SMAD4-207ENST00000589076 SLC48A1Q6P1K1 146 aa0.21□□□□□ -2.38
SMAD4-207ENST00000589076 C4orf33Q8N1A6 199 aa0.21□□□□□ -2.38
SMAD4-207ENST00000589076 VPS13BQ7Z7G8 4022 aa0.21□□□□□ -2.38
SMAD4-207ENST00000589076 GOLGA3Q08378 1498 aa0.21□□□□□ -2.38
SMAD4-207ENST00000589076 MUC17Q685J3 4493 aa0.21□□□□□ -2.38
SMAD4-207ENST00000589076 PREX2Q70Z35 1606 aa0.2□□□□□ -2.38
SMAD4-207ENST00000589076 DNAH3Q8TD57 4116 aa0.2□□□□□ -2.38
SMAD4-207ENST00000589076 TMEM2Q9UHN6 1383 aa0.2□□□□□ -2.38
SMAD4-207ENST00000589076 DCAF1Q9Y4B6 1507 aa0.2□□□□□ -2.38
SMAD4-207ENST00000589076 GVQW2A0A096LPI5 108 aaPredicted RBP0.2□□□□□ -2.38
SMAD4-207ENST00000589076 M0R2Z0 102 aa0.2□□□□□ -2.38
SMAD4-207ENST00000589076 APODP05090 189 aa0.2□□□□□ -2.38
SMAD4-207ENST00000589076 LINC00694P0DN24 101 aa0.2□□□□□ -2.38
SMAD4-207ENST00000589076 MIC13Q5XKP0 118 aa0.2□□□□□ -2.38
SMAD4-207ENST00000589076 C20orf197Q8N268 126 aa0.2□□□□□ -2.38
SMAD4-207ENST00000589076 COX7B2Q8TF08 81 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms