RNA–Protein interactions for RNA: ENST00000589064.5

MBD3-205, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 1,475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-205ENST00000589064 SLPIP03973 132 aa13.36□□□□□ -0.27
MBD3-205ENST00000589064 SUMO2P61956 95 aaKnown RBP13.36□□□□□ -0.27
MBD3-205ENST00000589064 MRPL54Q6P161 138 aaKnown RBP13.36□□□□□ -0.27
MBD3-205ENST00000589064 SDIM1Q6ZPB5 146 aa13.36□□□□□ -0.27
MBD3-205ENST00000589064 OR5A1Q8NGJ0 315 aa13.36□□□□□ -0.27
MBD3-205ENST00000589064 AP5S1Q9NUS5 200 aa13.36□□□□□ -0.27
MBD3-205ENST00000589064 FCER1GP30273 86 aa13.35□□□□□ -0.27
MBD3-205ENST00000589064 CNBPP62633 177 aaKnown RBP13.35□□□□□ -0.27
MBD3-205ENST00000589064 CFAP161Q6P656 301 aa13.35□□□□□ -0.27
MBD3-205ENST00000589064 C7orf77A4D0Y5 90 aa13.34□□□□□ -0.27
MBD3-205ENST00000589064 C15orf56Q8N910 161 aa13.34□□□□□ -0.27
MBD3-205ENST00000589064 CKS2P33552 79 aa13.33□□□□□ -0.28
MBD3-205ENST00000589064 C10orf91Q5T1B1 145 aa13.33□□□□□ -0.28
MBD3-205ENST00000589064 MRPL52Q86TS9 123 aaKnown RBP13.33□□□□□ -0.28
MBD3-205ENST00000589064 CDC42SE2Q9NRR3 84 aa13.33□□□□□ -0.28
MBD3-205ENST00000589064 LINC00959A0A1B0GUT2 108 aa13.32□□□□□ -0.28
MBD3-205ENST00000589064 KIR2DL4Q99706 377 aa13.32□□□□□ -0.28
MBD3-205ENST00000589064 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.32□□□□□ -0.28
MBD3-205ENST00000589064 PANO1I0J062 215 aa13.31□□□□□ -0.28
MBD3-205ENST00000589064 PPP1R2P9O14990 202 aa13.31□□□□□ -0.28
MBD3-205ENST00000589064 MT-ND4LP03901 98 aa13.31□□□□□ -0.28
MBD3-205ENST00000589064 XCL1P47992 114 aa13.31□□□□□ -0.28
MBD3-205ENST00000589064 HBBP68871 147 aa13.31□□□□□ -0.28
MBD3-205ENST00000589064 FOXI1Q12951 378 aa13.31□□□□□ -0.28
MBD3-205ENST00000589064 HIGD2BQ4VC39 106 aa13.31□□□□□ -0.28
MBD3-205ENST00000589064 SLC7A5P1Q8MH63 180 aa13.31□□□□□ -0.28
MBD3-205ENST00000589064 ZNF664Q8N3J9 261 aa13.31□□□□□ -0.28
MBD3-205ENST00000589064 CARHSP1Q9Y2V2 147 aaKnown RBP13.31□□□□□ -0.28
MBD3-205ENST00000589064 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.3□□□□□ -0.28
MBD3-205ENST00000589064 A0A1B0GXF2 115 aa13.3□□□□□ -0.28
MBD3-205ENST00000589064 CCL25O15444 150 aa13.3□□□□□ -0.28
MBD3-205ENST00000589064 S100A8P05109 93 aa13.3□□□□□ -0.28
MBD3-205ENST00000589064 ANAPC16Q96DE5 110 aa13.3□□□□□ -0.28
MBD3-205ENST00000589064 FLG2Q5D862 2391 aaPredicted RBP13.3□□□□□ -0.28
MBD3-205ENST00000589064 TRBV24-1A0A075B6N3 115 aa13.29□□□□□ -0.28
MBD3-205ENST00000589064 C20orf78Q9BR46 151 aa13.29□□□□□ -0.28
MBD3-205ENST00000589064 IGHV3-64A0A075B6Q5 118 aa13.29□□□□□ -0.28
MBD3-205ENST00000589064 TNFRSF6BO95407 300 aa13.29□□□□□ -0.28
MBD3-205ENST00000589064 D6R8Y8 96 aa13.28□□□□□ -0.28
MBD3-205ENST00000589064 SS18Q15532 418 aa13.28□□□□□ -0.28
MBD3-205ENST00000589064 DPH3Q96FX2 82 aa13.27□□□□□ -0.29
MBD3-205ENST00000589064 UBE2D4Q9Y2X8 147 aa13.27□□□□□ -0.29
MBD3-205ENST00000589064 APOC3P02656 99 aa13.25□□□□□ -0.29
MBD3-205ENST00000589064 KRTAP10-4P60372 401 aaPredicted RBP13.25□□□□□ -0.29
MBD3-205ENST00000589064 RPL32P62910 135 aaKnown RBP13.25□□□□□ -0.29
MBD3-205ENST00000589064 NDUFA5Q16718 116 aa13.25□□□□□ -0.29
MBD3-205ENST00000589064 RNASE13Q5GAN3 156 aaKnown RBP13.25□□□□□ -0.29
MBD3-205ENST00000589064 CSDC2Q9Y534 153 aaKnown RBP13.25□□□□□ -0.29
MBD3-205ENST00000589064 MYCBP2O75592 4640 aa13.25□□□□□ -0.29
MBD3-205ENST00000589064 GVQW2A0A096LPI5 108 aaPredicted RBP13.24□□□□□ -0.29
MBD3-205ENST00000589064 NPYP01303 97 aa13.24□□□□□ -0.29
MBD3-205ENST00000589064 SMAGPQ0VAQ4 97 aa13.24□□□□□ -0.29
MBD3-205ENST00000589064 PPBPP02775 128 aa13.23□□□□□ -0.29
MBD3-205ENST00000589064 CHTF8P0CG12 524 aa13.23□□□□□ -0.29
MBD3-205ENST00000589064 CIRBPQ14011 172 aaKnown RBP13.23□□□□□ -0.29
MBD3-205ENST00000589064 CD164L2Q6UWJ8 174 aa13.23□□□□□ -0.29
MBD3-205ENST00000589064 ATP5L2Q7Z4Y8 100 aa13.23□□□□□ -0.29
MBD3-205ENST00000589064 TMEM18Q96B42 140 aa13.23□□□□□ -0.29
MBD3-205ENST00000589064 SMIM2Q9BVW6 85 aa13.23□□□□□ -0.29
MBD3-205ENST00000589064 CTDSP1Q9GZU7 261 aa13.23□□□□□ -0.29
MBD3-205ENST00000589064 IGHV1-58A0A0C4DH39 117 aa13.22□□□□□ -0.29
MBD3-205ENST00000589064 COX6A2Q02221 97 aa13.22□□□□□ -0.29
MBD3-205ENST00000589064 RHEBQ15382 184 aa13.22□□□□□ -0.29
MBD3-205ENST00000589064 TMEM136Q6ZRR5 245 aa13.22□□□□□ -0.29
MBD3-205ENST00000589064 LINC00526Q96FQ7 95 aa13.22□□□□□ -0.29
MBD3-205ENST00000589064 TIMM21Q9BVV7 248 aa13.22□□□□□ -0.29
MBD3-205ENST00000589064 TRAV13-1A0A0B4J241 112 aa13.21□□□□□ -0.3
MBD3-205ENST00000589064 C1orf196B1AJZ1 125 aa13.21□□□□□ -0.3
MBD3-205ENST00000589064 PHOX2AO14813 284 aa13.21□□□□□ -0.3
MBD3-205ENST00000589064 TCAPO15273 167 aa13.21□□□□□ -0.3
MBD3-205ENST00000589064 RPL39P62891 51 aaKnown RBP13.21□□□□□ -0.3
MBD3-205ENST00000589064 ORMDL3Q8N138 153 aa13.21□□□□□ -0.3
MBD3-205ENST00000589064 SVBPQ8N300 66 aa13.21□□□□□ -0.3
MBD3-205ENST00000589064 HERC1Q15751 4861 aa13.2□□□□□ -0.3
MBD3-205ENST00000589064 RPL37AP61513 92 aaKnown RBP13.2□□□□□ -0.3
MBD3-205ENST00000589064 Q6ZUT4 128 aa13.2□□□□□ -0.3
MBD3-205ENST00000589064 PRSS3P2Q8NHM4 247 aa13.2□□□□□ -0.3
MBD3-205ENST00000589064 PRELID3AQ96N28 172 aa13.2□□□□□ -0.3
MBD3-205ENST00000589064 RPS10P5Q9NQ39 176 aa13.2□□□□□ -0.3
MBD3-205ENST00000589064 DMBT1Q9UGM3 2413 aaPredicted RBP13.19□□□□□ -0.3
MBD3-205ENST00000589064 A0A087WYN8 130 aa13.19□□□□□ -0.3
MBD3-205ENST00000589064 SNAPINO95295 136 aa13.19□□□□□ -0.3
MBD3-205ENST00000589064 IMMP2LQ96T52 175 aa13.19□□□□□ -0.3
MBD3-205ENST00000589064 SPACA4Q8TDM5 124 aa13.18□□□□□ -0.3
MBD3-205ENST00000589064 J3QL48 77 aa13.16□□□□□ -0.3
MBD3-205ENST00000589064 ZNF561-AS1K7EIQ3 104 aa13.16□□□□□ -0.3
MBD3-205ENST00000589064 MALP21145 153 aa13.16□□□□□ -0.3
MBD3-205ENST00000589064 FAM104AQ969W3 186 aa13.16□□□□□ -0.3
MBD3-205ENST00000589064 OPRPNQ99935 248 aaPredicted RBP13.16□□□□□ -0.3
MBD3-205ENST00000589064 COX7A2LO14548 114 aa13.16□□□□□ -0.3
MBD3-205ENST00000589064 RAB5AP20339 215 aa13.16□□□□□ -0.3
MBD3-205ENST00000589064 IGKV2-24A0A0C4DH68 120 aa13.15□□□□□ -0.3
MBD3-205ENST00000589064 LOC389332A0A1B0GUA5 103 aa13.15□□□□□ -0.3
MBD3-205ENST00000589064 MAJINQ3KP22 176 aa13.15□□□□□ -0.3
MBD3-205ENST00000589064 C5orf38Q86SI9 138 aa13.15□□□□□ -0.3
MBD3-205ENST00000589064 SPANXA1Q9NS26 97 aa13.15□□□□□ -0.3
MBD3-205ENST00000589064 KRTAP29-1A8MX34 341 aaPredicted RBP13.14□□□□□ -0.31
MBD3-205ENST00000589064 PLAC8Q9NZF1 115 aa13.14□□□□□ -0.31
MBD3-205ENST00000589064 S100PP25815 95 aa13.13□□□□□ -0.31
MBD3-205ENST00000589064 SYCNQ0VAF6 134 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 174.6 ms