RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 FAM104AQ969W3 186 aa21.38■■□□□ 1.01
CAPNS1-206ENST00000588815 CST9LQ9H4G1 147 aa21.38■■□□□ 1.01
CAPNS1-206ENST00000588815 PRSS29PA6NIE9 313 aa21.37■■□□□ 1.01
CAPNS1-206ENST00000588815 F8VRH5 84 aa21.37■■□□□ 1.01
CAPNS1-206ENST00000588815 LINC00518Q8N0U6 118 aa21.37■■□□□ 1.01
CAPNS1-206ENST00000588815 OPRPNQ99935 248 aaPredicted RBP21.37■■□□□ 1.01
CAPNS1-206ENST00000588815 TRAV8-6A0A0B4J262 113 aa21.36■■□□□ 1.01
CAPNS1-206ENST00000588815 CHTOPQ9Y3Y2 248 aaKnown RBP21.36■■□□□ 1.01
CAPNS1-206ENST00000588815 IGLL5B9A064 214 aa21.35■■□□□ 1.01
CAPNS1-206ENST00000588815 Q6ZUT4 128 aa21.35■■□□□ 1.01
CAPNS1-206ENST00000588815 C12orf57Q99622 126 aa21.35■■□□□ 1.01
CAPNS1-206ENST00000588815 CDC42SE2Q9NRR3 84 aa21.35■■□□□ 1.01
CAPNS1-206ENST00000588815 NUPR2A6NF83 97 aa21.34■■□□□ 1.01
CAPNS1-206ENST00000588815 ZNF664Q8N3J9 261 aa21.34■■□□□ 1.01
CAPNS1-206ENST00000588815 C2orf88Q9BSF0 95 aa21.34■■□□□ 1.01
CAPNS1-206ENST00000588815 TMEM262E9PQX1 116 aa21.32■■□□□ 1
CAPNS1-206ENST00000588815 PLNP26678 52 aa21.32■■□□□ 1
CAPNS1-206ENST00000588815 MRPL35Q9NZE8 188 aaKnown RBP21.32■■□□□ 1
CAPNS1-206ENST00000588815 DPM2O94777 84 aa21.32■■□□□ 1
CAPNS1-206ENST00000588815 S100A12P80511 92 aa21.32■■□□□ 1
CAPNS1-206ENST00000588815 ESRGQ1W209 222 aa21.32■■□□□ 1
CAPNS1-206ENST00000588815 PMCHL2Q9BQD1 86 aa21.31■■□□□ 1
CAPNS1-206ENST00000588815 IGKCP01834 107 aa21.3■■□□□ 1
CAPNS1-206ENST00000588815 RBX1P62877 108 aa21.29■■□□□ 1
CAPNS1-206ENST00000588815 KLK5Q9Y337 293 aaPredicted RBP21.29■■□□□ 1
CAPNS1-206ENST00000588815 TCTAP57738 103 aa21.28■■□□□ 1
CAPNS1-206ENST00000588815 MPV17L2Q567V2 206 aa21.28■■□□□ 1
CAPNS1-206ENST00000588815 ZC2HC1BQ5TFG8 222 aa21.27■■□□□ 1
CAPNS1-206ENST00000588815 IGLV4-60A0A075B6I1 120 aa21.26■□□□□ 0.99
CAPNS1-206ENST00000588815 CDPF1Q6NVV7 123 aa21.26■□□□□ 0.99
CAPNS1-206ENST00000588815 CCL18P55774 89 aa21.26■□□□□ 0.99
CAPNS1-206ENST00000588815 RNASE13Q5GAN3 156 aaKnown RBP21.26■□□□□ 0.99
CAPNS1-206ENST00000588815 NFE4Q86UQ8 179 aa21.25■□□□□ 0.99
CAPNS1-206ENST00000588815 ATOH7Q8N100 152 aa21.25■□□□□ 0.99
CAPNS1-206ENST00000588815 VAMP8Q9BV40 100 aa21.25■□□□□ 0.99
CAPNS1-206ENST00000588815 IGLV4-69A0A075B6H9 119 aa21.24■□□□□ 0.99
CAPNS1-206ENST00000588815 TRAV9-2A0A087WT02 112 aa21.24■□□□□ 0.99
CAPNS1-206ENST00000588815 FBN3Q75N90 2809 aa21.23■□□□□ 0.99
CAPNS1-206ENST00000588815 IGLC3P0DOY3 106 aa21.23■□□□□ 0.99
CAPNS1-206ENST00000588815 SEC11AP67812 179 aa21.23■□□□□ 0.99
CAPNS1-206ENST00000588815 FAM19A3Q7Z5A8 133 aa21.23■□□□□ 0.99
CAPNS1-206ENST00000588815 HSBP1L1C9JCN9 74 aa21.22■□□□□ 0.99
CAPNS1-206ENST00000588815 UBE2D1P51668 147 aa21.22■□□□□ 0.99
CAPNS1-206ENST00000588815 MRPS16Q9Y3D3 137 aaKnown RBP21.22■□□□□ 0.99
CAPNS1-206ENST00000588815 APLNQ9ULZ1 77 aa21.21■□□□□ 0.99
CAPNS1-206ENST00000588815 TINCRA0A1B0GVN0 87 aa21.2■□□□□ 0.98
CAPNS1-206ENST00000588815 CCL25O15444 150 aa21.19■□□□□ 0.98
CAPNS1-206ENST00000588815 WFDC10BQ8IUB3 73 aa21.19■□□□□ 0.98
CAPNS1-206ENST00000588815 CHAC1Q9BUX1 264 aa21.19■□□□□ 0.98
CAPNS1-206ENST00000588815 C11orf86A6NJI1 115 aa21.18■□□□□ 0.98
CAPNS1-206ENST00000588815 LINC00588Q9Y4M8 146 aa21.18■□□□□ 0.98
CAPNS1-206ENST00000588815 A0A0J9YXV3 536 aa21.17■□□□□ 0.98
CAPNS1-206ENST00000588815 UPK3BQ9BT76 320 aa21.17■□□□□ 0.98
CAPNS1-206ENST00000588815 ANGP03950 147 aaKnown RBP21.16■□□□□ 0.98
CAPNS1-206ENST00000588815 HERVK_113P63121 156 aa21.15■□□□□ 0.98
CAPNS1-206ENST00000588815 LINC01556Q5JQF7 62 aa21.15■□□□□ 0.98
CAPNS1-206ENST00000588815 PAM16Q9Y3D7 125 aa21.15■□□□□ 0.98
CAPNS1-206ENST00000588815 TRAV13-1A0A0B4J241 112 aa21.14■□□□□ 0.98
CAPNS1-206ENST00000588815 hDV102S1A0JD36 115 aa21.13■□□□□ 0.97
CAPNS1-206ENST00000588815 GEMIN7Q9H840 131 aaKnown RBP21.13■□□□□ 0.97
CAPNS1-206ENST00000588815 DNAH10OSP0CZ25 163 aa21.13■□□□□ 0.97
CAPNS1-206ENST00000588815 SPATA45Q537H7 98 aa21.13■□□□□ 0.97
CAPNS1-206ENST00000588815 LINC00242Q5T6M2 205 aa21.13■□□□□ 0.97
CAPNS1-206ENST00000588815 LINC00269Q8N2A0 174 aa21.12■□□□□ 0.97
CAPNS1-206ENST00000588815 MAJINQ3KP22 176 aa21.11■□□□□ 0.97
CAPNS1-206ENST00000588815 PRR34Q9NV39 138 aa21.11■□□□□ 0.97
CAPNS1-206ENST00000588815 IGLV5-45A0A087WSX0 123 aa21.1■□□□□ 0.97
CAPNS1-206ENST00000588815 LINC00959A0A1B0GUT2 108 aa21.1■□□□□ 0.97
CAPNS1-206ENST00000588815 ZNF22P17026 224 aaPredicted RBP21.1■□□□□ 0.97
CAPNS1-206ENST00000588815 REG3AQ06141 175 aa21.1■□□□□ 0.97
CAPNS1-206ENST00000588815 SS18Q15532 418 aa21.1■□□□□ 0.97
CAPNS1-206ENST00000588815 TMEM170BQ5T4T1 132 aa21.1■□□□□ 0.97
CAPNS1-206ENST00000588815 Q8N3U1 123 aa21.1■□□□□ 0.97
CAPNS1-206ENST00000588815 WWC2-AS2Q96NR7 200 aa21.1■□□□□ 0.97
CAPNS1-206ENST00000588815 SIVA1O15304 175 aa21.09■□□□□ 0.97
CAPNS1-206ENST00000588815 STPG4Q8N801 248 aa21.09■□□□□ 0.97
CAPNS1-206ENST00000588815 MUC7Q8TAX7 377 aa21.09■□□□□ 0.97
CAPNS1-206ENST00000588815 IGHV3-30P01768 117 aa21.08■□□□□ 0.97
CAPNS1-206ENST00000588815 IGHV3-33P01772 117 aa21.08■□□□□ 0.97
CAPNS1-206ENST00000588815 IGHV3-30-3P0DP02 117 aa21.08■□□□□ 0.97
CAPNS1-206ENST00000588815 IGHV3-30-5P0DP03 117 aa21.08■□□□□ 0.97
CAPNS1-206ENST00000588815 HERVK_113P61574 105 aa21.08■□□□□ 0.97
CAPNS1-206ENST00000588815 KLK12Q9UKR0 248 aa21.07■□□□□ 0.96
CAPNS1-206ENST00000588815 DYNC2H1Q8NCM8 4307 aaKnown RBP21.07■□□□□ 0.96
CAPNS1-206ENST00000588815 IGKV3OR2-268A0A0C4DH90 116 aa21.07■□□□□ 0.96
CAPNS1-206ENST00000588815 DNAH7Q8WXX0 4024 aa21.06■□□□□ 0.96
CAPNS1-206ENST00000588815 H3BRM9 83 aa21.06■□□□□ 0.96
CAPNS1-206ENST00000588815 LINC00469Q8N7U9 141 aa21.05■□□□□ 0.96
CAPNS1-206ENST00000588815 K7EP13 123 aa21.04■□□□□ 0.96
CAPNS1-206ENST00000588815 CRPP02741 224 aa21.04■□□□□ 0.96
CAPNS1-206ENST00000588815 ANKRD39Q53RE8 183 aa21.04■□□□□ 0.96
CAPNS1-206ENST00000588815 TRAV8-4A0A0B4J246 113 aa21.02■□□□□ 0.96
CAPNS1-206ENST00000588815 TMEM223A0PJW6 202 aa21.02■□□□□ 0.96
CAPNS1-206ENST00000588815 E9PLD3 99 aa21.02■□□□□ 0.96
CAPNS1-206ENST00000588815 COX6A2Q02221 97 aa21.02■□□□□ 0.96
CAPNS1-206ENST00000588815 CLPSL2Q6UWE3 100 aa21.02■□□□□ 0.96
CAPNS1-206ENST00000588815 UBE2DNLQ8IWF7 75 aa21.02■□□□□ 0.96
CAPNS1-206ENST00000588815 TSTD3H0UI37 97 aa21.01■□□□□ 0.95
CAPNS1-206ENST00000588815 CDKN2A-AS1Q9UH64 79 aa21.01■□□□□ 0.95
CAPNS1-206ENST00000588815 MIAQ16674 131 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms