RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 TMEM136Q6ZRR5 245 aa12.54□□□□□ -0.4
CIRBP-217ENST00000588230 MRPL52Q86TS9 123 aaKnown RBP12.54□□□□□ -0.4
CIRBP-217ENST00000588230 ORMDL3Q8N138 153 aa12.54□□□□□ -0.4
CIRBP-217ENST00000588230 GAGE12HA6NDE8 117 aa12.53□□□□□ -0.4
CIRBP-217ENST00000588230 PHOX2AO14813 284 aa12.53□□□□□ -0.4
CIRBP-217ENST00000588230 TCAPO15273 167 aa12.53□□□□□ -0.4
CIRBP-217ENST00000588230 PRSS1P07477 247 aa12.53□□□□□ -0.4
CIRBP-217ENST00000588230 SMAGPQ0VAQ4 97 aa12.53□□□□□ -0.4
CIRBP-217ENST00000588230 IMMP2LQ96T52 175 aa12.53□□□□□ -0.4
CIRBP-217ENST00000588230 SMIM2Q9BVW6 85 aa12.53□□□□□ -0.4
CIRBP-217ENST00000588230 CTDSP1Q9GZU7 261 aa12.53□□□□□ -0.4
CIRBP-217ENST00000588230 CLRN3Q8NCR9 226 aa12.52□□□□□ -0.41
CIRBP-217ENST00000588230 CHCHD10Q8WYQ3 142 aaPredicted RBP12.52□□□□□ -0.41
CIRBP-217ENST00000588230 PRELID3AQ96N28 172 aa12.52□□□□□ -0.41
CIRBP-217ENST00000588230 FAM30AQ9NZY2 134 aa12.52□□□□□ -0.41
CIRBP-217ENST00000588230 TMEM18Q96B42 140 aa12.51□□□□□ -0.41
CIRBP-217ENST00000588230 CDC42SE2Q9NRR3 84 aa12.51□□□□□ -0.41
CIRBP-217ENST00000588230 HAMPP81172 84 aa12.5□□□□□ -0.41
CIRBP-217ENST00000588230 ZNF664Q8N3J9 261 aa12.5□□□□□ -0.41
CIRBP-217ENST00000588230 hDV102S1A0JD36 115 aa12.49□□□□□ -0.41
CIRBP-217ENST00000588230 LINC00959A0A1B0GUT2 108 aa12.48□□□□□ -0.41
CIRBP-217ENST00000588230 SS18Q15532 418 aa12.48□□□□□ -0.41
CIRBP-217ENST00000588230 CFAP161Q6P656 301 aa12.48□□□□□ -0.41
CIRBP-217ENST00000588230 AP5S1Q9NUS5 200 aa12.48□□□□□ -0.41
CIRBP-217ENST00000588230 LAMTOR2Q9Y2Q5 125 aa12.48□□□□□ -0.41
CIRBP-217ENST00000588230 UBE2D4Q9Y2X8 147 aa12.48□□□□□ -0.41
CIRBP-217ENST00000588230 CSDC2Q9Y534 153 aaKnown RBP12.48□□□□□ -0.41
CIRBP-217ENST00000588230 EPM2AB3EWF7 344 aa12.47□□□□□ -0.41
CIRBP-217ENST00000588230 RAB5AP20339 215 aa12.47□□□□□ -0.41
CIRBP-217ENST00000588230 XCL1P47992 114 aa12.47□□□□□ -0.41
CIRBP-217ENST00000588230 TRAV9-1A0A075B6T8 112 aa12.46□□□□□ -0.41
CIRBP-217ENST00000588230 CCL25O15444 150 aa12.46□□□□□ -0.41
CIRBP-217ENST00000588230 SMR3BP02814 79 aaPredicted RBP12.46□□□□□ -0.41
CIRBP-217ENST00000588230 S100PP25815 95 aa12.46□□□□□ -0.41
CIRBP-217ENST00000588230 Q6ZSA8 131 aa12.46□□□□□ -0.41
CIRBP-217ENST00000588230 TIMM21Q9BVV7 248 aa12.46□□□□□ -0.41
CIRBP-217ENST00000588230 SRRM2Q9UQ35 2752 aaKnown RBP12.46□□□□□ -0.42
CIRBP-217ENST00000588230 LOC389332A0A1B0GUA5 103 aa12.45□□□□□ -0.42
CIRBP-217ENST00000588230 C10orf91Q5T1B1 145 aa12.45□□□□□ -0.42
CIRBP-217ENST00000588230 Q5VSD8 79 aa12.45□□□□□ -0.42
CIRBP-217ENST00000588230 MAP1LC3AQ9H492 121 aa12.45□□□□□ -0.42
CIRBP-217ENST00000588230 CARHSP1Q9Y2V2 147 aaKnown RBP12.45□□□□□ -0.42
CIRBP-217ENST00000588230 RPL39P62891 51 aaKnown RBP12.44□□□□□ -0.42
CIRBP-217ENST00000588230 FOXI1Q12951 378 aa12.44□□□□□ -0.42
CIRBP-217ENST00000588230 C9orf163Q8N9P6 203 aa12.44□□□□□ -0.42
CIRBP-217ENST00000588230 MYCBP2O75592 4640 aa12.43□□□□□ -0.42
CIRBP-217ENST00000588230 PRSS47A8MTI9 375 aa12.43□□□□□ -0.42
CIRBP-217ENST00000588230 CNBPP62633 177 aaKnown RBP12.43□□□□□ -0.42
CIRBP-217ENST00000588230 RNASE13Q5GAN3 156 aaKnown RBP12.43□□□□□ -0.42
CIRBP-217ENST00000588230 C15orf56Q8N910 161 aa12.43□□□□□ -0.42
CIRBP-217ENST00000588230 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.42□□□□□ -0.42
CIRBP-217ENST00000588230 C1orf196B1AJZ1 125 aa12.42□□□□□ -0.42
CIRBP-217ENST00000588230 RHEBQ15382 184 aa12.42□□□□□ -0.42
CIRBP-217ENST00000588230 CD164L2Q6UWJ8 174 aa12.42□□□□□ -0.42
CIRBP-217ENST00000588230 Q6ZUT4 128 aa12.42□□□□□ -0.42
CIRBP-217ENST00000588230 RPS10P5Q9NQ39 176 aa12.42□□□□□ -0.42
CIRBP-217ENST00000588230 SPANXA1Q9NS26 97 aa12.42□□□□□ -0.42
CIRBP-217ENST00000588230 TRAV13-1A0A0B4J241 112 aa12.41□□□□□ -0.42
CIRBP-217ENST00000588230 HIGD2BQ4VC39 106 aa12.41□□□□□ -0.42
CIRBP-217ENST00000588230 FAM229AH3BQW9 127 aa12.4□□□□□ -0.42
CIRBP-217ENST00000588230 Q8N8P6 123 aa12.4□□□□□ -0.42
CIRBP-217ENST00000588230 CHAC1Q9BUX1 264 aa12.4□□□□□ -0.42
CIRBP-217ENST00000588230 SLPIP03973 132 aa12.39□□□□□ -0.43
CIRBP-217ENST00000588230 SCXQ7RTU7 201 aa12.39□□□□□ -0.43
CIRBP-217ENST00000588230 GVQW2A0A096LPI5 108 aaPredicted RBP12.38□□□□□ -0.43
CIRBP-217ENST00000588230 IGHV1-58A0A0C4DH39 117 aa12.38□□□□□ -0.43
CIRBP-217ENST00000588230 KIAA1644Q3SXP7 199 aa12.38□□□□□ -0.43
CIRBP-217ENST00000588230 OPRPNQ99935 248 aaPredicted RBP12.38□□□□□ -0.43
CIRBP-217ENST00000588230 GNB1LQ9BYB4 327 aa12.38□□□□□ -0.43
CIRBP-217ENST00000588230 FLG2Q5D862 2391 aaPredicted RBP12.37□□□□□ -0.43
CIRBP-217ENST00000588230 APOC3P02656 99 aa12.37□□□□□ -0.43
CIRBP-217ENST00000588230 IFI27P40305 119 aaPredicted RBP12.37□□□□□ -0.43
CIRBP-217ENST00000588230 MRPS36P82909 103 aaKnown RBP12.37□□□□□ -0.43
CIRBP-217ENST00000588230 NDUFA5Q16718 116 aa12.37□□□□□ -0.43
CIRBP-217ENST00000588230 COX19Q49B96 90 aa12.37□□□□□ -0.43
CIRBP-217ENST00000588230 SDIM1Q6ZPB5 146 aa12.37□□□□□ -0.43
CIRBP-217ENST00000588230 NXT2Q9NPJ8 142 aaKnown RBP12.37□□□□□ -0.43
CIRBP-217ENST00000588230 IGHV3-64A0A075B6Q5 118 aa12.36□□□□□ -0.43
CIRBP-217ENST00000588230 COX7A2LO14548 114 aa12.36□□□□□ -0.43
CIRBP-217ENST00000588230 MALP21145 153 aa12.36□□□□□ -0.43
CIRBP-217ENST00000588230 HERC1Q15751 4861 aa12.36□□□□□ -0.43
CIRBP-217ENST00000588230 K7EMI3 77 aa12.35□□□□□ -0.43
CIRBP-217ENST00000588230 INAFM2P0DMQ5 153 aa12.35□□□□□ -0.43
CIRBP-217ENST00000588230 ORMDL2Q53FV1 153 aa12.35□□□□□ -0.43
CIRBP-217ENST00000588230 CIRBP-AS1Q8TBR5 109 aa12.35□□□□□ -0.43
CIRBP-217ENST00000588230 FAM104AQ969W3 186 aa12.35□□□□□ -0.43
CIRBP-217ENST00000588230 CYSLTR1Q9Y271 337 aa12.35□□□□□ -0.43
CIRBP-217ENST00000588230 PYGO1Q9Y3Y4 419 aa12.35□□□□□ -0.43
CIRBP-217ENST00000588230 IFITM10A6NMD0 228 aa12.33□□□□□ -0.44
CIRBP-217ENST00000588230 ZNF561-AS1K7EIQ3 104 aa12.33□□□□□ -0.44
CIRBP-217ENST00000588230 SNAPINO95295 136 aa12.33□□□□□ -0.44
CIRBP-217ENST00000588230 MT-ND6P03923 174 aa12.33□□□□□ -0.44
CIRBP-217ENST00000588230 C2orf66Q6UXQ4 117 aa12.33□□□□□ -0.44
CIRBP-217ENST00000588230 LINC00528Q8N1L1 170 aa12.33□□□□□ -0.44
CIRBP-217ENST00000588230 SVBPQ8N300 66 aa12.33□□□□□ -0.44
CIRBP-217ENST00000588230 DMBT1Q9UGM3 2413 aaPredicted RBP12.32□□□□□ -0.44
CIRBP-217ENST00000588230 C5orf38Q86SI9 138 aa12.32□□□□□ -0.44
CIRBP-217ENST00000588230 LINC00526Q96FQ7 95 aa12.32□□□□□ -0.44
CIRBP-217ENST00000588230 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.32□□□□□ -0.44
CIRBP-217ENST00000588230 IGLV4-3A0A075B6K6 122 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms