RNA–Protein interactions for RNA: ENST00000585843.1

DNMT1-204, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 911 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-204ENST00000585843 NDUFA5Q16718 116 aa9.22□□□□□ -0.93
DNMT1-204ENST00000585843 MRPL52Q86TS9 123 aaKnown RBP9.22□□□□□ -0.93
DNMT1-204ENST00000585843 LAMTOR2Q9Y2Q5 125 aa9.22□□□□□ -0.93
DNMT1-204ENST00000585843 APOC3P02656 99 aa9.21□□□□□ -0.94
DNMT1-204ENST00000585843 GCSHP23434 173 aa9.21□□□□□ -0.94
DNMT1-204ENST00000585843 C14orf177Q52M58 125 aa9.21□□□□□ -0.94
DNMT1-204ENST00000585843 DGAT2L7PQ6IED9 249 aa9.21□□□□□ -0.94
DNMT1-204ENST00000585843 KRTAP26-1Q6PEX3 210 aa9.21□□□□□ -0.94
DNMT1-204ENST00000585843 TMEM18Q96B42 140 aa9.21□□□□□ -0.94
DNMT1-204ENST00000585843 IGKV3OR2-268A0A0C4DH90 116 aa9.2□□□□□ -0.94
DNMT1-204ENST00000585843 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.19□□□□□ -0.94
DNMT1-204ENST00000585843 USP17L23D6RBM5 183 aa9.19□□□□□ -0.94
DNMT1-204ENST00000585843 CDK2AP2O75956 126 aa9.19□□□□□ -0.94
DNMT1-204ENST00000585843 SNAPINO95295 136 aa9.19□□□□□ -0.94
DNMT1-204ENST00000585843 RAB5AP20339 215 aa9.19□□□□□ -0.94
DNMT1-204ENST00000585843 SVBPQ8N300 66 aa9.19□□□□□ -0.94
DNMT1-204ENST00000585843 MAP1LC3AQ9H492 121 aa9.19□□□□□ -0.94
DNMT1-204ENST00000585843 LOC389332A0A1B0GUA5 103 aa9.18□□□□□ -0.94
DNMT1-204ENST00000585843 PRSS47A8MTI9 375 aa9.18□□□□□ -0.94
DNMT1-204ENST00000585843 KRTAP10-1P60331 282 aa9.18□□□□□ -0.94
DNMT1-204ENST00000585843 ZNF664Q8N3J9 261 aa9.18□□□□□ -0.94
DNMT1-204ENST00000585843 CDC42SE2Q9NRR3 84 aa9.18□□□□□ -0.94
DNMT1-204ENST00000585843 CSDC2Q9Y534 153 aaKnown RBP9.18□□□□□ -0.94
DNMT1-204ENST00000585843 HSPG2P98160 4391 aa9.17□□□□□ -0.94
DNMT1-204ENST00000585843 GAGE12HA6NDE8 117 aa9.17□□□□□ -0.94
DNMT1-204ENST00000585843 COX19Q49B96 90 aa9.17□□□□□ -0.94
DNMT1-204ENST00000585843 TIMM21Q9BVV7 248 aa9.17□□□□□ -0.94
DNMT1-204ENST00000585843 GNB1LQ9BYB4 327 aa9.17□□□□□ -0.94
DNMT1-204ENST00000585843 UBE2D4Q9Y2X8 147 aa9.17□□□□□ -0.94
DNMT1-204ENST00000585843 CHCHD10Q8WYQ3 142 aaPredicted RBP9.16□□□□□ -0.94
DNMT1-204ENST00000585843 LINC00959A0A1B0GUT2 108 aa9.15□□□□□ -0.94
DNMT1-204ENST00000585843 RPL39P62891 51 aaKnown RBP9.15□□□□□ -0.94
DNMT1-204ENST00000585843 SS18Q15532 418 aa9.15□□□□□ -0.94
DNMT1-204ENST00000585843 KIAA1644Q3SXP7 199 aa9.15□□□□□ -0.94
DNMT1-204ENST00000585843 Q8N8P6 123 aa9.15□□□□□ -0.94
DNMT1-204ENST00000585843 DNAH8Q96JB1 4490 aa9.15□□□□□ -0.95
DNMT1-204ENST00000585843 MT-ND6P03923 174 aa9.14□□□□□ -0.95
DNMT1-204ENST00000585843 PRSS1P07477 247 aa9.14□□□□□ -0.95
DNMT1-204ENST00000585843 XCL1P47992 114 aa9.14□□□□□ -0.95
DNMT1-204ENST00000585843 CFAP161Q6P656 301 aa9.14□□□□□ -0.95
DNMT1-204ENST00000585843 SPANXA1Q9NS26 97 aa9.14□□□□□ -0.95
DNMT1-204ENST00000585843 CCL25O15444 150 aa9.13□□□□□ -0.95
DNMT1-204ENST00000585843 Q6ZUT4 128 aa9.13□□□□□ -0.95
DNMT1-204ENST00000585843 NXT2Q9NPJ8 142 aaKnown RBP9.13□□□□□ -0.95
DNMT1-204ENST00000585843 TGIF2-C20orf24A0A0A6YYL0 155 aa9.12□□□□□ -0.95
DNMT1-204ENST00000585843 hDV102S1A0JD36 115 aa9.12□□□□□ -0.95
DNMT1-204ENST00000585843 K7EMI3 77 aa9.12□□□□□ -0.95
DNMT1-204ENST00000585843 FABP9Q0Z7S8 132 aa9.12□□□□□ -0.95
DNMT1-204ENST00000585843 ORMDL2Q53FV1 153 aa9.12□□□□□ -0.95
DNMT1-204ENST00000585843 RNASE13Q5GAN3 156 aaKnown RBP9.12□□□□□ -0.95
DNMT1-204ENST00000585843 SLC7A5P1Q8MH63 180 aa9.12□□□□□ -0.95
DNMT1-204ENST00000585843 MRPL18Q9H0U6 180 aaKnown RBP9.12□□□□□ -0.95
DNMT1-204ENST00000585843 C1orf196B1AJZ1 125 aa9.11□□□□□ -0.95
DNMT1-204ENST00000585843 IFI27P40305 119 aaPredicted RBP9.11□□□□□ -0.95
DNMT1-204ENST00000585843 MRPS36P82909 103 aaKnown RBP9.11□□□□□ -0.95
DNMT1-204ENST00000585843 FOXI1Q12951 378 aa9.11□□□□□ -0.95
DNMT1-204ENST00000585843 ALKBH7Q9BT30 221 aaPredicted RBP9.11□□□□□ -0.95
DNMT1-204ENST00000585843 TRAV13-1A0A0B4J241 112 aa9.1□□□□□ -0.95
DNMT1-204ENST00000585843 LINC01620Q4KN68 170 aa9.1□□□□□ -0.95
DNMT1-204ENST00000585843 CD164L2Q6UWJ8 174 aa9.1□□□□□ -0.95
DNMT1-204ENST00000585843 PRSS3P2Q8NHM4 247 aa9.1□□□□□ -0.95
DNMT1-204ENST00000585843 AP5S1Q9NUS5 200 aa9.1□□□□□ -0.95
DNMT1-204ENST00000585843 CYSLTR1Q9Y271 337 aa9.1□□□□□ -0.95
DNMT1-204ENST00000585843 PYGO1Q9Y3Y4 419 aa9.1□□□□□ -0.95
DNMT1-204ENST00000585843 G0S2P27469 103 aa9.09□□□□□ -0.95
DNMT1-204ENST00000585843 XGP55808 180 aa9.09□□□□□ -0.95
DNMT1-204ENST00000585843 C15orf56Q8N910 161 aa9.09□□□□□ -0.95
DNMT1-204ENST00000585843 OPRPNQ99935 248 aaPredicted RBP9.09□□□□□ -0.95
DNMT1-204ENST00000585843 TRAPPC1Q9Y5R8 145 aa9.09□□□□□ -0.95
DNMT1-204ENST00000585843 C2orf66Q6UXQ4 117 aa9.08□□□□□ -0.96
DNMT1-204ENST00000585843 FAM104AQ969W3 186 aa9.08□□□□□ -0.96
DNMT1-204ENST00000585843 IFITM10A6NMD0 228 aa9.07□□□□□ -0.96
DNMT1-204ENST00000585843 COX7A2LO14548 114 aa9.07□□□□□ -0.96
DNMT1-204ENST00000585843 CNBPP62633 177 aaKnown RBP9.07□□□□□ -0.96
DNMT1-204ENST00000585843 FAM30AQ9NZY2 134 aa9.07□□□□□ -0.96
DNMT1-204ENST00000585843 FAT1Q14517 4588 aa9.06□□□□□ -0.96
DNMT1-204ENST00000585843 IGLV4-3A0A075B6K6 122 aa9.06□□□□□ -0.96
DNMT1-204ENST00000585843 GVQW2A0A096LPI5 108 aaPredicted RBP9.06□□□□□ -0.96
DNMT1-204ENST00000585843 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.06□□□□□ -0.96
DNMT1-204ENST00000585843 IGHV1-58A0A0C4DH39 117 aa9.06□□□□□ -0.96
DNMT1-204ENST00000585843 HIGD2BQ4VC39 106 aa9.06□□□□□ -0.96
DNMT1-204ENST00000585843 C9orf163Q8N9P6 203 aa9.06□□□□□ -0.96
DNMT1-204ENST00000585843 TMEM141Q96I45 108 aa9.06□□□□□ -0.96
DNMT1-204ENST00000585843 SMCO4Q9NRQ5 59 aa9.06□□□□□ -0.96
DNMT1-204ENST00000585843 MALP21145 153 aa9.05□□□□□ -0.96
DNMT1-204ENST00000585843 Q6ZN92 141 aa9.05□□□□□ -0.96
DNMT1-204ENST00000585843 Q6ZSA8 131 aa9.05□□□□□ -0.96
DNMT1-204ENST00000585843 FA2HQ7L5A8 372 aa9.05□□□□□ -0.96
DNMT1-204ENST00000585843 YPEL4Q96NS1 127 aa9.05□□□□□ -0.96
DNMT1-204ENST00000585843 LINC01546A6NGU7 62 aa9.04□□□□□ -0.96
DNMT1-204ENST00000585843 SLPIP03973 132 aa9.04□□□□□ -0.96
DNMT1-204ENST00000585843 NPSP0C0P6 89 aa9.04□□□□□ -0.96
DNMT1-204ENST00000585843 HAMPP81172 84 aa9.04□□□□□ -0.96
DNMT1-204ENST00000585843 TEX43Q6ZNM6 134 aa9.04□□□□□ -0.96
DNMT1-204ENST00000585843 Q8N1X5 172 aa9.04□□□□□ -0.96
DNMT1-204ENST00000585843 TOMM6Q96B49 74 aa9.04□□□□□ -0.96
DNMT1-204ENST00000585843 C2orf88Q9BSF0 95 aa9.04□□□□□ -0.96
DNMT1-204ENST00000585843 VCX2Q9H322 139 aa9.04□□□□□ -0.96
DNMT1-204ENST00000585843 IGIPA6NJ69 53 aa9.03□□□□□ -0.96
DNMT1-204ENST00000585843 PAPPA-AS1Q5QFB9 102 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms