RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 MRPS10P82664 201 aaKnown RBP0.2□□□□□ -2.38
PPP4R1-227ENST00000583988 SVBPQ8N300 66 aa0.2□□□□□ -2.38
PPP4R1-227ENST00000583988 AMELXQ99217 191 aa0.2□□□□□ -2.38
PPP4R1-227ENST00000583988 SYNE1Q8NF91 8797 aaKnown RBP0.2□□□□□ -2.38
PPP4R1-227ENST00000583988 MYOM2P54296 1465 aa0.2□□□□□ -2.38
PPP4R1-227ENST00000583988 CUL7Q14999 1698 aa0.2□□□□□ -2.38
PPP4R1-227ENST00000583988 QRICH2Q9H0J4 1663 aa0.2□□□□□ -2.38
PPP4R1-227ENST00000583988 BIVM-ERCC5R4GMW8 1640 aa0.2□□□□□ -2.38
PPP4R1-227ENST00000583988 PLXNB2O15031 1838 aa0.2□□□□□ -2.38
PPP4R1-227ENST00000583988 SBF2Q86WG5 1849 aa0.2□□□□□ -2.38
PPP4R1-227ENST00000583988 UNC79Q9P2D8 2635 aa0.19□□□□□ -2.38
PPP4R1-227ENST00000583988 PLCE1Q9P212 2302 aa0.19□□□□□ -2.38
PPP4R1-227ENST00000583988 KIF21AQ7Z4S6 1674 aa0.19□□□□□ -2.38
PPP4R1-227ENST00000583988 A0A1B0GV90 55 aa0.19□□□□□ -2.38
PPP4R1-227ENST00000583988 M0R3E3 92 aa0.19□□□□□ -2.38
PPP4R1-227ENST00000583988 HMGN4O00479 90 aa0.19□□□□□ -2.38
PPP4R1-227ENST00000583988 PPP3R1P63098 170 aa0.19□□□□□ -2.38
PPP4R1-227ENST00000583988 TSLPQ969D9 159 aa0.19□□□□□ -2.38
PPP4R1-227ENST00000583988 FAIMQ9NVQ4 179 aa0.19□□□□□ -2.38
PPP4R1-227ENST00000583988 GNG8Q9UK08 70 aa0.19□□□□□ -2.38
PPP4R1-227ENST00000583988 IER3IP1Q9Y5U9 82 aa0.19□□□□□ -2.38
PPP4R1-227ENST00000583988 FSIP2Q5CZC0 6907 aa0.19□□□□□ -2.38
PPP4R1-227ENST00000583988 DMBT1Q9UGM3 2413 aaPredicted RBP0.18□□□□□ -2.38
PPP4R1-227ENST00000583988 C2CD3Q4AC94 2353 aa0.18□□□□□ -2.38
PPP4R1-227ENST00000583988 CHD9Q3L8U1 2897 aa0.18□□□□□ -2.38
PPP4R1-227ENST00000583988 PSME4Q14997 1843 aa0.18□□□□□ -2.38
PPP4R1-227ENST00000583988 SHANK2Q9UPX8 1470 aa0.18□□□□□ -2.38
PPP4R1-227ENST00000583988 NHSL1Q5SYE7 1610 aa0.18□□□□□ -2.38
PPP4R1-227ENST00000583988 IGLC7A0M8Q6 106 aa0.18□□□□□ -2.38
PPP4R1-227ENST00000583988 OOSP1A8MZH6 123 aa0.18□□□□□ -2.38
PPP4R1-227ENST00000583988 F6UZH7 168 aa0.18□□□□□ -2.38
PPP4R1-227ENST00000583988 DCDP81605 110 aaKnown RBP0.18□□□□□ -2.38
PPP4R1-227ENST00000583988 Q6JHZ5 121 aa0.18□□□□□ -2.38
PPP4R1-227ENST00000583988 Q8IZM0 81 aa0.18□□□□□ -2.38
PPP4R1-227ENST00000583988 LINC01558Q9Y6Z2 57 aa0.18□□□□□ -2.38
PPP4R1-227ENST00000583988 DOPEY2Q9Y3R5 2298 aa0.18□□□□□ -2.38
PPP4R1-227ENST00000583988 ANK2Q01484 3957 aa0.18□□□□□ -2.38
PPP4R1-227ENST00000583988 RIMS1Q86UR5 1692 aaKnown RBP0.18□□□□□ -2.38
PPP4R1-227ENST00000583988 LRP6O75581 1613 aa0.17□□□□□ -2.38
PPP4R1-227ENST00000583988 CHKB-CPT1BH3BT56 60 aa0.17□□□□□ -2.38
PPP4R1-227ENST00000583988 CORTO00230 105 aa0.17□□□□□ -2.38
PPP4R1-227ENST00000583988 SFT2D2O95562 160 aa0.17□□□□□ -2.38
PPP4R1-227ENST00000583988 MGPP08493 103 aa0.17□□□□□ -2.38
PPP4R1-227ENST00000583988 S100A1P23297 94 aa0.17□□□□□ -2.38
PPP4R1-227ENST00000583988 WHAMMP3Q1A5X7 153 aa0.17□□□□□ -2.38
PPP4R1-227ENST00000583988 C2orf88Q9BSF0 95 aa0.17□□□□□ -2.38
PPP4R1-227ENST00000583988 ZNF236Q9UL36 1845 aa0.17□□□□□ -2.38
PPP4R1-227ENST00000583988 MAPKBP1O60336 1514 aa0.17□□□□□ -2.38
PPP4R1-227ENST00000583988 PKDREJQ9NTG1 2253 aa0.16□□□□□ -2.38
PPP4R1-227ENST00000583988 BCE1O60756 84 aa0.16□□□□□ -2.38
PPP4R1-227ENST00000583988 GNG11P61952 73 aa0.16□□□□□ -2.38
PPP4R1-227ENST00000583988 WFDC2Q14508 124 aa0.16□□□□□ -2.38
PPP4R1-227ENST00000583988 PIGYQ3MUY2 71 aa0.16□□□□□ -2.38
PPP4R1-227ENST00000583988 TP53AIP1Q9HCN2 124 aa0.16□□□□□ -2.38
PPP4R1-227ENST00000583988 ROBO1Q9Y6N7 1651 aa0.16□□□□□ -2.38
PPP4R1-227ENST00000583988 AKAP6Q13023 2319 aa0.16□□□□□ -2.38
PPP4R1-227ENST00000583988 FAM135AQ9P2D6 1515 aa0.16□□□□□ -2.38
PPP4R1-227ENST00000583988 HIVEP3Q5T1R4 2406 aa0.16□□□□□ -2.38
PPP4R1-227ENST00000583988 RAPGEF6Q8TEU7 1601 aa0.16□□□□□ -2.38
PPP4R1-227ENST00000583988 ZNF292O60281 2723 aa0.15□□□□□ -2.38
PPP4R1-227ENST00000583988 NRKQ7Z2Y5 1582 aa0.15□□□□□ -2.38
PPP4R1-227ENST00000583988 MYOM1P52179 1685 aa0.15□□□□□ -2.39
PPP4R1-227ENST00000583988 C10orf71Q711Q0 1435 aa0.15□□□□□ -2.39
PPP4R1-227ENST00000583988 UBR5O95071 2799 aaPredicted RBP0.15□□□□□ -2.39
PPP4R1-227ENST00000583988 NAP1L6A6NFF2 107 aa0.15□□□□□ -2.39
PPP4R1-227ENST00000583988 C10orf142B7Z368 130 aa0.15□□□□□ -2.39
PPP4R1-227ENST00000583988 MYO7BQ6PIF6 2116 aa0.15□□□□□ -2.39
PPP4R1-227ENST00000583988 GTF2H5Q6ZYL4 71 aa0.15□□□□□ -2.39
PPP4R1-227ENST00000583988 DPH3P1Q9H4G8 78 aa0.15□□□□□ -2.39
PPP4R1-227ENST00000583988 NXT2Q9NPJ8 142 aaKnown RBP0.15□□□□□ -2.39
PPP4R1-227ENST00000583988 SHROOM2Q13796 1616 aa0.15□□□□□ -2.39
PPP4R1-227ENST00000583988 SCAPERQ9BY12 1400 aa0.14□□□□□ -2.39
PPP4R1-227ENST00000583988 PTPRQQ9UMZ3 2332 aa0.14□□□□□ -2.39
PPP4R1-227ENST00000583988 HRNRQ86YZ3 2850 aaPredicted RBP0.14□□□□□ -2.39
PPP4R1-227ENST00000583988 COX6CP09669 75 aa0.14□□□□□ -2.39
PPP4R1-227ENST00000583988 DEFB109BQ30KR1 87 aa0.14□□□□□ -2.39
PPP4R1-227ENST00000583988 FAM167A-AS1Q96KT0 104 aa0.14□□□□□ -2.39
PPP4R1-227ENST00000583988 MANBALQ9NQG1 85 aa0.14□□□□□ -2.39
PPP4R1-227ENST00000583988 LINC00474Q9P2X8 69 aa0.14□□□□□ -2.39
PPP4R1-227ENST00000583988 GOLGA4Q13439 2230 aaKnown RBP0.14□□□□□ -2.39
PPP4R1-227ENST00000583988 NCOR1O75376 2440 aa0.14□□□□□ -2.39
PPP4R1-227ENST00000583988 ABCA2Q9BZC7 2435 aa0.14□□□□□ -2.39
PPP4R1-227ENST00000583988 FXYD6-FXYD2A0A087WZ82 144 aa0.13□□□□□ -2.39
PPP4R1-227ENST00000583988 TRBV6-1A0A0K0K1D8 114 aa0.13□□□□□ -2.39
PPP4R1-227ENST00000583988 H3BQ15 152 aa0.13□□□□□ -2.39
PPP4R1-227ENST00000583988 TRAPPC2P0DI81 140 aa0.13□□□□□ -2.39
PPP4R1-227ENST00000583988 TRAPPC2BP0DI82 140 aa0.13□□□□□ -2.39
PPP4R1-227ENST00000583988 KRTDAPP60985 99 aa0.13□□□□□ -2.39
PPP4R1-227ENST00000583988 Q5VSD8 79 aa0.13□□□□□ -2.39
PPP4R1-227ENST00000583988 LINC00472Q9H8W2 130 aa0.13□□□□□ -2.39
PPP4R1-227ENST00000583988 CDC42SE2Q9NRR3 84 aa0.13□□□□□ -2.39
PPP4R1-227ENST00000583988 PTPN13Q12923 2485 aa0.12□□□□□ -2.39
PPP4R1-227ENST00000583988 WNK2Q9Y3S1 2297 aa0.12□□□□□ -2.39
PPP4R1-227ENST00000583988 KDM5AP29375 1690 aaKnown RBP0.12□□□□□ -2.39
PPP4R1-227ENST00000583988 LINC00587B1AMM8 73 aa0.12□□□□□ -2.39
PPP4R1-227ENST00000583988 UBA52P62987 128 aaKnown RBP0.12□□□□□ -2.39
PPP4R1-227ENST00000583988 TMEM263Q8WUH6 116 aaKnown RBP0.12□□□□□ -2.39
PPP4R1-227ENST00000583988 PRO1854Q9UHT4 67 aa0.12□□□□□ -2.39
PPP4R1-227ENST00000583988 ARL2-SNX15V9GYD0 113 aa0.12□□□□□ -2.39
PPP4R1-227ENST00000583988 LRP1Q07954 4544 aaKnown RBP0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms