RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 I3L3M4 83 aa7.78□□□□□ -1.16
NUP85-224ENST00000583948 RPL36AP83881 106 aaKnown RBP7.78□□□□□ -1.16
NUP85-224ENST00000583948 GAGE1Q13065 139 aa7.78□□□□□ -1.16
NUP85-224ENST00000583948 GAGE4Q13068 117 aa7.78□□□□□ -1.16
NUP85-224ENST00000583948 GAGE5Q13069 117 aa7.78□□□□□ -1.16
NUP85-224ENST00000583948 RHOHQ15669 191 aa7.78□□□□□ -1.16
NUP85-224ENST00000583948 GAGE13Q4V321 117 aa7.78□□□□□ -1.16
NUP85-224ENST00000583948 LINC00173Q6ZV60 143 aa7.78□□□□□ -1.16
NUP85-224ENST00000583948 RPL36ALQ969Q0 106 aaKnown RBP7.78□□□□□ -1.16
NUP85-224ENST00000583948 PRADC1Q9BSG0 188 aa7.78□□□□□ -1.16
NUP85-224ENST00000583948 HSPB8Q9UJY1 196 aa7.78□□□□□ -1.16
NUP85-224ENST00000583948 IGHV3-38A0A0C4DH36 116 aa7.77□□□□□ -1.17
NUP85-224ENST00000583948 TRBV10-1A0A0K0K1A3 114 aa7.77□□□□□ -1.17
NUP85-224ENST00000583948 TRBV27A0A0K0K1C4 114 aa7.77□□□□□ -1.17
NUP85-224ENST00000583948 LOC100131303A0A0U1RQF7 123 aa7.77□□□□□ -1.17
NUP85-224ENST00000583948 TRBV6-4A0A1B0GX49 114 aa7.77□□□□□ -1.17
NUP85-224ENST00000583948 K7EMI3 77 aa7.77□□□□□ -1.17
NUP85-224ENST00000583948 TRBV7-3A0A075B6L6 115 aa7.76□□□□□ -1.17
NUP85-224ENST00000583948 H0Y8G0 127 aa7.76□□□□□ -1.17
NUP85-224ENST00000583948 SCGB1D1O95968 90 aa7.76□□□□□ -1.17
NUP85-224ENST00000583948 TSHBP01222 138 aa7.76□□□□□ -1.17
NUP85-224ENST00000583948 ATP5G1P05496 136 aa7.76□□□□□ -1.17
NUP85-224ENST00000583948 C3orf79P0CE67 100 aa7.76□□□□□ -1.17
NUP85-224ENST00000583948 HHLA3Q9XRX5 114 aa7.76□□□□□ -1.17
NUP85-224ENST00000583948 A0A087WTM6 91 aa7.75□□□□□ -1.17
NUP85-224ENST00000583948 SMIM6P0DI80 62 aa7.75□□□□□ -1.17
NUP85-224ENST00000583948 GCSHP23434 173 aa7.75□□□□□ -1.17
NUP85-224ENST00000583948 COTL1Q14019 142 aa7.75□□□□□ -1.17
NUP85-224ENST00000583948 TTC32Q5I0X7 151 aa7.75□□□□□ -1.17
NUP85-224ENST00000583948 PYY3Q5JQD4 70 aa7.75□□□□□ -1.17
NUP85-224ENST00000583948 MAP1LC3CQ9BXW4 147 aa7.75□□□□□ -1.17
NUP85-224ENST00000583948 PKHD1L1Q86WI1 4243 aa7.74□□□□□ -1.17
NUP85-224ENST00000583948 TRAV26-1A0A087WT03 109 aa7.74□□□□□ -1.17
NUP85-224ENST00000583948 PAX4O43316 350 aa7.74□□□□□ -1.17
NUP85-224ENST00000583948 GYPEP15421 78 aa7.74□□□□□ -1.17
NUP85-224ENST00000583948 G0S2P27469 103 aa7.74□□□□□ -1.17
NUP85-224ENST00000583948 CRYBA4P53673 196 aa7.74□□□□□ -1.17
NUP85-224ENST00000583948 UBE2D3P61077 147 aa7.74□□□□□ -1.17
NUP85-224ENST00000583948 UBE2D2P62837 147 aa7.74□□□□□ -1.17
NUP85-224ENST00000583948 JOSD1Q15040 202 aaPredicted RBP7.74□□□□□ -1.17
NUP85-224ENST00000583948 C2orf66Q6UXQ4 117 aa7.74□□□□□ -1.17
NUP85-224ENST00000583948 TOMM6Q96B49 74 aa7.74□□□□□ -1.17
NUP85-224ENST00000583948 IFI27L1Q96BM0 104 aa7.74□□□□□ -1.17
NUP85-224ENST00000583948 PRO0255Q9UI72 69 aa7.74□□□□□ -1.17
NUP85-224ENST00000583948 CYSLTR1Q9Y271 337 aa7.74□□□□□ -1.17
NUP85-224ENST00000583948 ATP5LO75964 103 aa7.73□□□□□ -1.17
NUP85-224ENST00000583948 DAZ4Q86SG3 579 aaKnown RBP7.73□□□□□ -1.17
NUP85-224ENST00000583948 SCGB3A1Q96QR1 104 aa7.73□□□□□ -1.17
NUP85-224ENST00000583948 C12orf57Q99622 126 aa7.73□□□□□ -1.17
NUP85-224ENST00000583948 DAZ3Q9NR90 486 aaKnown RBP7.73□□□□□ -1.17
NUP85-224ENST00000583948 C20orf202A1L168 122 aa7.72□□□□□ -1.17
NUP85-224ENST00000583948 SYS1-DBNDD2H3BUS1 97 aa7.72□□□□□ -1.17
NUP85-224ENST00000583948 RPL39P62891 51 aaKnown RBP7.72□□□□□ -1.17
NUP85-224ENST00000583948 CDPF1Q6NVV7 123 aa7.72□□□□□ -1.17
NUP85-224ENST00000583948 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.71□□□□□ -1.18
NUP85-224ENST00000583948 EREGO14944 169 aa7.71□□□□□ -1.18
NUP85-224ENST00000583948 PET117Q6UWS5 81 aa7.71□□□□□ -1.18
NUP85-224ENST00000583948 Q6ZN92 141 aa7.71□□□□□ -1.18
NUP85-224ENST00000583948 LINC00518Q8N0U6 118 aa7.71□□□□□ -1.18
NUP85-224ENST00000583948 LINC00528Q8N1L1 170 aa7.71□□□□□ -1.18
NUP85-224ENST00000583948 MRPS16Q9Y3D3 137 aaKnown RBP7.71□□□□□ -1.18
NUP85-224ENST00000583948 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.7□□□□□ -1.18
NUP85-224ENST00000583948 A0A096LPF7 62 aa7.7□□□□□ -1.18
NUP85-224ENST00000583948 IGKV2-29A2NJV5 120 aaPredicted RBP7.7□□□□□ -1.18
NUP85-224ENST00000583948 LINC01549A6NIU2 74 aa7.7□□□□□ -1.18
NUP85-224ENST00000583948 PRSS1P07477 247 aa7.7□□□□□ -1.18
NUP85-224ENST00000583948 LINC00694P0DN24 101 aa7.7□□□□□ -1.18
NUP85-224ENST00000583948 Q8N976 141 aa7.7□□□□□ -1.18
NUP85-224ENST00000583948 C20orf203Q8NBC4 194 aa7.7□□□□□ -1.18
NUP85-224ENST00000583948 VSIG2Q96IQ7 327 aa7.7□□□□□ -1.18
NUP85-224ENST00000583948 UPK3BQ9BT76 320 aa7.7□□□□□ -1.18
NUP85-224ENST00000583948 CHCHD7Q9BUK0 85 aa7.7□□□□□ -1.18
NUP85-224ENST00000583948 ERASQ7Z444 233 aa7.69□□□□□ -1.18
NUP85-224ENST00000583948 ATOH7Q8N100 152 aa7.69□□□□□ -1.18
NUP85-224ENST00000583948 ATP6V0E2Q8NHE4 81 aa7.69□□□□□ -1.18
NUP85-224ENST00000583948 PMCHL2Q9BQD1 86 aa7.69□□□□□ -1.18
NUP85-224ENST00000583948 UBE2L6O14933 153 aa7.68□□□□□ -1.18
NUP85-224ENST00000583948 NTM-AS1Q6ZSK4 140 aa7.68□□□□□ -1.18
NUP85-224ENST00000583948 TMEM141Q96I45 108 aa7.68□□□□□ -1.18
NUP85-224ENST00000583948 TMEM243Q9BU79 118 aa7.68□□□□□ -1.18
NUP85-224ENST00000583948 ICOSQ9Y6W8 199 aa7.68□□□□□ -1.18
NUP85-224ENST00000583948 TRBV25-1A0A075B6N4 114 aa7.67□□□□□ -1.18
NUP85-224ENST00000583948 IGIPA6NJ69 53 aa7.67□□□□□ -1.18
NUP85-224ENST00000583948 KRTAP10-4P60372 401 aaPredicted RBP7.67□□□□□ -1.18
NUP85-224ENST00000583948 S100A12P80511 92 aa7.67□□□□□ -1.18
NUP85-224ENST00000583948 TMEM97Q5BJF2 176 aa7.67□□□□□ -1.18
NUP85-224ENST00000583948 LINC01545Q5VT33 79 aa7.67□□□□□ -1.18
NUP85-224ENST00000583948 BAALCQ8WXS3 180 aa7.67□□□□□ -1.18
NUP85-224ENST00000583948 TIMM17AQ99595 171 aa7.67□□□□□ -1.18
NUP85-224ENST00000583948 GTSF1LQ9H1H1 148 aa7.67□□□□□ -1.18
NUP85-224ENST00000583948 IGLV5-52A0A0A0MRZ9 124 aa7.66□□□□□ -1.18
NUP85-224ENST00000583948 PLA2G1BP04054 148 aaKnown RBP7.66□□□□□ -1.18
NUP85-224ENST00000583948 MRPL23Q16540 153 aaKnown RBP7.66□□□□□ -1.18
NUP85-224ENST00000583948 ZC2HC1BQ5TFG8 222 aa7.66□□□□□ -1.18
NUP85-224ENST00000583948 OPRPNQ99935 248 aaPredicted RBP7.66□□□□□ -1.18
NUP85-224ENST00000583948 CHCHD5Q9BSY4 110 aa7.66□□□□□ -1.18
NUP85-224ENST00000583948 SPANXA1Q9NS26 97 aa7.66□□□□□ -1.18
NUP85-224ENST00000583948 TRBV6-8A0A0A6YYG3 113 aa7.65□□□□□ -1.18
NUP85-224ENST00000583948 SIVA1O15304 175 aa7.65□□□□□ -1.18
NUP85-224ENST00000583948 GAGE6Q13070 117 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms