RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 EPM2AB3EWF7 344 aa9.07□□□□□ -0.96
GGA3-215ENST00000582821 D6R8Y8 96 aa9.07□□□□□ -0.96
GGA3-215ENST00000582821 ADCYAP1P18509 176 aa9.07□□□□□ -0.96
GGA3-215ENST00000582821 FCER1GP30273 86 aa9.07□□□□□ -0.96
GGA3-215ENST00000582821 CDC42SE2Q9NRR3 84 aa9.07□□□□□ -0.96
GGA3-215ENST00000582821 SMAGPQ0VAQ4 97 aa9.06□□□□□ -0.96
GGA3-215ENST00000582821 LINC01620Q4KN68 170 aa9.06□□□□□ -0.96
GGA3-215ENST00000582821 C9orf163Q8N9P6 203 aa9.06□□□□□ -0.96
GGA3-215ENST00000582821 CHCHD10Q8WYQ3 142 aaPredicted RBP9.06□□□□□ -0.96
GGA3-215ENST00000582821 IMMP2LQ96T52 175 aa9.06□□□□□ -0.96
GGA3-215ENST00000582821 IGKV3OR2-268A0A0C4DH90 116 aa9.05□□□□□ -0.96
GGA3-215ENST00000582821 LINC00959A0A1B0GUT2 108 aa9.05□□□□□ -0.96
GGA3-215ENST00000582821 GAGE12HA6NDE8 117 aa9.05□□□□□ -0.96
GGA3-215ENST00000582821 PRSS47A8MTI9 375 aa9.05□□□□□ -0.96
GGA3-215ENST00000582821 NPYP01303 97 aa9.05□□□□□ -0.96
GGA3-215ENST00000582821 CNBPP62633 177 aaKnown RBP9.05□□□□□ -0.96
GGA3-215ENST00000582821 CFAP161Q6P656 301 aa9.05□□□□□ -0.96
GGA3-215ENST00000582821 TMEM136Q6ZRR5 245 aa9.05□□□□□ -0.96
GGA3-215ENST00000582821 ORMDL3Q8N138 153 aa9.05□□□□□ -0.96
GGA3-215ENST00000582821 ZNF664Q8N3J9 261 aa9.05□□□□□ -0.96
GGA3-215ENST00000582821 TIMM21Q9BVV7 248 aa9.05□□□□□ -0.96
GGA3-215ENST00000582821 SMIM2Q9BVW6 85 aa9.05□□□□□ -0.96
GGA3-215ENST00000582821 SEC11CQ9BY50 192 aa9.05□□□□□ -0.96
GGA3-215ENST00000582821 TMEM18Q96B42 140 aa9.04□□□□□ -0.96
GGA3-215ENST00000582821 CTDSP1Q9GZU7 261 aa9.04□□□□□ -0.96
GGA3-215ENST00000582821 UBE2D4Q9Y2X8 147 aa9.04□□□□□ -0.96
GGA3-215ENST00000582821 SRRM2Q9UQ35 2752 aaKnown RBP9.04□□□□□ -0.96
GGA3-215ENST00000582821 VPS13BQ7Z7G8 4022 aa9.04□□□□□ -0.96
GGA3-215ENST00000582821 CCL25O15444 150 aa9.03□□□□□ -0.96
GGA3-215ENST00000582821 SMR3BP02814 79 aaPredicted RBP9.03□□□□□ -0.96
GGA3-215ENST00000582821 HAMPP81172 84 aa9.03□□□□□ -0.96
GGA3-215ENST00000582821 Q5VSD8 79 aa9.03□□□□□ -0.96
GGA3-215ENST00000582821 PRELID3AQ96N28 172 aa9.03□□□□□ -0.96
GGA3-215ENST00000582821 LAMTOR2Q9Y2Q5 125 aa9.03□□□□□ -0.96
GGA3-215ENST00000582821 hDV102S1A0JD36 115 aa9.02□□□□□ -0.97
GGA3-215ENST00000582821 FOXI1Q12951 378 aa9.02□□□□□ -0.97
GGA3-215ENST00000582821 SS18Q15532 418 aa9.02□□□□□ -0.97
GGA3-215ENST00000582821 C15orf56Q8N910 161 aa9.02□□□□□ -0.97
GGA3-215ENST00000582821 CHAC1Q9BUX1 264 aa9.02□□□□□ -0.97
GGA3-215ENST00000582821 AP5S1Q9NUS5 200 aa9.02□□□□□ -0.97
GGA3-215ENST00000582821 TRAV9-1A0A075B6T8 112 aa9.01□□□□□ -0.97
GGA3-215ENST00000582821 FAM229AH3BQW9 127 aa9.01□□□□□ -0.97
GGA3-215ENST00000582821 SLPIP03973 132 aa9.01□□□□□ -0.97
GGA3-215ENST00000582821 C10orf91Q5T1B1 145 aa9.01□□□□□ -0.97
GGA3-215ENST00000582821 CD164L2Q6UWJ8 174 aa9.01□□□□□ -0.97
GGA3-215ENST00000582821 SDIM1Q6ZPB5 146 aa9.01□□□□□ -0.97
GGA3-215ENST00000582821 COMMD7Q86VX2 200 aa9.01□□□□□ -0.97
GGA3-215ENST00000582821 SCXQ7RTU7 201 aa9□□□□□ -0.97
GGA3-215ENST00000582821 GVQW2A0A096LPI5 108 aaPredicted RBP8.99□□□□□ -0.97
GGA3-215ENST00000582821 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.99□□□□□ -0.97
GGA3-215ENST00000582821 C1orf196B1AJZ1 125 aa8.99□□□□□ -0.97
GGA3-215ENST00000582821 XCL1P47992 114 aa8.99□□□□□ -0.97
GGA3-215ENST00000582821 CIRBP-AS1Q8TBR5 109 aa8.99□□□□□ -0.97
GGA3-215ENST00000582821 FAM104AQ969W3 186 aa8.99□□□□□ -0.97
GGA3-215ENST00000582821 RAB5AP20339 215 aa8.98□□□□□ -0.97
GGA3-215ENST00000582821 RPL39P62891 51 aaKnown RBP8.98□□□□□ -0.97
GGA3-215ENST00000582821 MRPS36P82909 103 aaKnown RBP8.98□□□□□ -0.97
GGA3-215ENST00000582821 SPANXA1Q9NS26 97 aa8.98□□□□□ -0.97
GGA3-215ENST00000582821 CARHSP1Q9Y2V2 147 aaKnown RBP8.98□□□□□ -0.97
GGA3-215ENST00000582821 IGHV1-58A0A0C4DH39 117 aa8.97□□□□□ -0.97
GGA3-215ENST00000582821 FLG2Q5D862 2391 aaPredicted RBP8.97□□□□□ -0.97
GGA3-215ENST00000582821 IGHV3-64A0A075B6Q5 118 aa8.96□□□□□ -0.98
GGA3-215ENST00000582821 INAFM2P0DMQ5 153 aa8.96□□□□□ -0.98
GGA3-215ENST00000582821 CIRBPQ14011 172 aaKnown RBP8.96□□□□□ -0.98
GGA3-215ENST00000582821 HIGD2BQ4VC39 106 aa8.96□□□□□ -0.98
GGA3-215ENST00000582821 Q6ZUT4 128 aa8.96□□□□□ -0.98
GGA3-215ENST00000582821 Q8N8P6 123 aa8.96□□□□□ -0.98
GGA3-215ENST00000582821 MAP1LC3AQ9H492 121 aa8.96□□□□□ -0.98
GGA3-215ENST00000582821 PYGO1Q9Y3Y4 419 aa8.96□□□□□ -0.98
GGA3-215ENST00000582821 TRAV13-1A0A0B4J241 112 aa8.95□□□□□ -0.98
GGA3-215ENST00000582821 K7EMI3 77 aa8.95□□□□□ -0.98
GGA3-215ENST00000582821 RNASE13Q5GAN3 156 aaKnown RBP8.95□□□□□ -0.98
GGA3-215ENST00000582821 LINC00528Q8N1L1 170 aa8.95□□□□□ -0.98
GGA3-215ENST00000582821 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.95□□□□□ -0.98
GGA3-215ENST00000582821 LOC389332A0A1B0GUA5 103 aa8.94□□□□□ -0.98
GGA3-215ENST00000582821 PLA2G1BP04054 148 aaKnown RBP8.94□□□□□ -0.98
GGA3-215ENST00000582821 S100PP25815 95 aa8.94□□□□□ -0.98
GGA3-215ENST00000582821 RHEBQ15382 184 aa8.94□□□□□ -0.98
GGA3-215ENST00000582821 GNB1LQ9BYB4 327 aa8.94□□□□□ -0.98
GGA3-215ENST00000582821 COX7A2LO14548 114 aa8.93□□□□□ -0.98
GGA3-215ENST00000582821 COX19Q49B96 90 aa8.93□□□□□ -0.98
GGA3-215ENST00000582821 OPRPNQ99935 248 aaPredicted RBP8.93□□□□□ -0.98
GGA3-215ENST00000582821 NXT2Q9NPJ8 142 aaKnown RBP8.93□□□□□ -0.98
GGA3-215ENST00000582821 PANO1I0J062 215 aa8.92□□□□□ -0.98
GGA3-215ENST00000582821 IFI27P40305 119 aaPredicted RBP8.92□□□□□ -0.98
GGA3-215ENST00000582821 ORMDL2Q53FV1 153 aa8.92□□□□□ -0.98
GGA3-215ENST00000582821 IGHV3OR16-9A0A0B4J2B5 98 aa8.91□□□□□ -0.98
GGA3-215ENST00000582821 ZNF561-AS1K7EIQ3 104 aa8.91□□□□□ -0.98
GGA3-215ENST00000582821 NPSP0C0P6 89 aa8.91□□□□□ -0.98
GGA3-215ENST00000582821 MALP21145 153 aa8.91□□□□□ -0.98
GGA3-215ENST00000582821 RPS10P5Q9NQ39 176 aa8.91□□□□□ -0.98
GGA3-215ENST00000582821 G0S2P27469 103 aa8.9□□□□□ -0.98
GGA3-215ENST00000582821 COX6A2Q02221 97 aa8.9□□□□□ -0.98
GGA3-215ENST00000582821 KIAA1644Q3SXP7 199 aa8.9□□□□□ -0.98
GGA3-215ENST00000582821 C2orf66Q6UXQ4 117 aa8.9□□□□□ -0.98
GGA3-215ENST00000582821 C5orf38Q86SI9 138 aa8.9□□□□□ -0.98
GGA3-215ENST00000582821 CYSLTR1Q9Y271 337 aa8.9□□□□□ -0.98
GGA3-215ENST00000582821 MYCBP2O75592 4640 aa8.89□□□□□ -0.99
GGA3-215ENST00000582821 IGLV4-3A0A075B6K6 122 aa8.89□□□□□ -0.99
GGA3-215ENST00000582821 IFITM10A6NMD0 228 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms