RNA–Protein interactions for RNA: ENST00000582788.5

ERBB2-212, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-212ENST00000582788 A0A0J9YXV3 536 aa12.54□□□□□ -0.4
ERBB2-212ENST00000582788 PTH2Q96A98 100 aa12.54□□□□□ -0.4
ERBB2-212ENST00000582788 A4D1N5 150 aa12.54□□□□□ -0.4
ERBB2-212ENST00000582788 FAM104AQ969W3 186 aa12.53□□□□□ -0.4
ERBB2-212ENST00000582788 LINC01600Q96MT4 127 aa12.53□□□□□ -0.4
ERBB2-212ENST00000582788 ERG28Q9UKR5 140 aa12.53□□□□□ -0.4
ERBB2-212ENST00000582788 TMEM263Q8WUH6 116 aaKnown RBP12.52□□□□□ -0.4
ERBB2-212ENST00000582788 PYGO1Q9Y3Y4 419 aa12.52□□□□□ -0.4
ERBB2-212ENST00000582788 IGHV3-64A0A075B6Q5 118 aa12.52□□□□□ -0.41
ERBB2-212ENST00000582788 A0A0B4J2C4 111 aa12.52□□□□□ -0.41
ERBB2-212ENST00000582788 IGLV1-51P01701 117 aa12.52□□□□□ -0.41
ERBB2-212ENST00000582788 IGHV3-33P01772 117 aa12.52□□□□□ -0.41
ERBB2-212ENST00000582788 M0R2P5 195 aa12.51□□□□□ -0.41
ERBB2-212ENST00000582788 ANKRD29Q8N6D5 301 aa12.5□□□□□ -0.41
ERBB2-212ENST00000582788 SCGB1C2P0DMR2 95 aa12.5□□□□□ -0.41
ERBB2-212ENST00000582788 MUSTN1Q8IVN3 82 aa12.5□□□□□ -0.41
ERBB2-212ENST00000582788 JMJD1CQ15652 2540 aa12.5□□□□□ -0.41
ERBB2-212ENST00000582788 A0A0J9YXY3 114 aa12.49□□□□□ -0.41
ERBB2-212ENST00000582788 MRPS36P82909 103 aaKnown RBP12.49□□□□□ -0.41
ERBB2-212ENST00000582788 IGHV3-73A0A0B4J1V6 119 aa12.48□□□□□ -0.41
ERBB2-212ENST00000582788 PF4P02776 101 aa12.48□□□□□ -0.41
ERBB2-212ENST00000582788 IGHV3-30-3P0DP02 117 aa12.48□□□□□ -0.41
ERBB2-212ENST00000582788 ZFAND6Q6FIF0 208 aa12.48□□□□□ -0.41
ERBB2-212ENST00000582788 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.48□□□□□ -0.41
ERBB2-212ENST00000582788 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.47□□□□□ -0.41
ERBB2-212ENST00000582788 SLC25A20O43772 301 aa12.47□□□□□ -0.41
ERBB2-212ENST00000582788 LINC00482Q8N8I6 264 aa12.47□□□□□ -0.41
ERBB2-212ENST00000582788 LITAFQ99732 161 aa12.47□□□□□ -0.41
ERBB2-212ENST00000582788 STHQ8IWL8 128 aa12.47□□□□□ -0.41
ERBB2-212ENST00000582788 CITED1Q99966 193 aa12.47□□□□□ -0.41
ERBB2-212ENST00000582788 TIMM21Q9BVV7 248 aa12.47□□□□□ -0.41
ERBB2-212ENST00000582788 PRM2P04554 102 aa12.46□□□□□ -0.41
ERBB2-212ENST00000582788 HTN1P15515 57 aa12.46□□□□□ -0.41
ERBB2-212ENST00000582788 SPXQ9BT56 116 aa12.45□□□□□ -0.42
ERBB2-212ENST00000582788 BEAN1Q3B7T3 259 aa12.45□□□□□ -0.42
ERBB2-212ENST00000582788 PIK3CD-AS1Q5SR53 167 aa12.45□□□□□ -0.42
ERBB2-212ENST00000582788 CEMP1Q6PRD7 247 aaPredicted RBP12.45□□□□□ -0.42
ERBB2-212ENST00000582788 PRIMA1Q86XR5 153 aa12.45□□□□□ -0.42
ERBB2-212ENST00000582788 TNFRSF18Q9Y5U5 241 aa12.45□□□□□ -0.42
ERBB2-212ENST00000582788 NACAE9PAV3 2078 aa12.45□□□□□ -0.42
ERBB2-212ENST00000582788 CHCHD7Q9BUK0 85 aa12.44□□□□□ -0.42
ERBB2-212ENST00000582788 C19orf73Q9NVV2 129 aa12.44□□□□□ -0.42
ERBB2-212ENST00000582788 Q6ZSN1 163 aa12.44□□□□□ -0.42
ERBB2-212ENST00000582788 ANAPC13Q9BS18 74 aa12.44□□□□□ -0.42
ERBB2-212ENST00000582788 WFDC10AQ9H1F0 79 aa12.44□□□□□ -0.42
ERBB2-212ENST00000582788 Q9UF83 564 aa12.44□□□□□ -0.42
ERBB2-212ENST00000582788 TRAV8-3A0A0A6YYJ7 113 aa12.43□□□□□ -0.42
ERBB2-212ENST00000582788 IGHV1-58A0A0C4DH39 117 aa12.43□□□□□ -0.42
ERBB2-212ENST00000582788 C9JAW5 83 aa12.43□□□□□ -0.42
ERBB2-212ENST00000582788 H7C2G1 150 aa12.43□□□□□ -0.42
ERBB2-212ENST00000582788 INSP01308 110 aa12.43□□□□□ -0.42
ERBB2-212ENST00000582788 ATXN8Q156A1 80 aa12.43□□□□□ -0.42
ERBB2-212ENST00000582788 RNF183Q96D59 192 aa12.43□□□□□ -0.42
ERBB2-212ENST00000582788 SPANXA1Q9NS26 97 aa12.43□□□□□ -0.42
ERBB2-212ENST00000582788 XCL2Q9UBD3 114 aa12.43□□□□□ -0.42
ERBB2-212ENST00000582788 RPL13AP40429 203 aaKnown RBP12.42□□□□□ -0.42
ERBB2-212ENST00000582788 CMC4P56277 68 aaPredicted RBP12.42□□□□□ -0.42
ERBB2-212ENST00000582788 ZNF415Q09FC8 603 aa12.42□□□□□ -0.42
ERBB2-212ENST00000582788 RNASE13Q5GAN3 156 aaKnown RBP12.42□□□□□ -0.42
ERBB2-212ENST00000582788 SPATA3Q8NHX4 192 aa12.42□□□□□ -0.42
ERBB2-212ENST00000582788 UBE2D4Q9Y2X8 147 aa12.42□□□□□ -0.42
ERBB2-212ENST00000582788 TINCRA0A1B0GVN0 87 aa12.42□□□□□ -0.42
ERBB2-212ENST00000582788 Q6Q795 121 aa12.42□□□□□ -0.42
ERBB2-212ENST00000582788 LINC01587Q99440 93 aa12.42□□□□□ -0.42
ERBB2-212ENST00000582788 FAM110AQ9BQ89 295 aa12.42□□□□□ -0.42
ERBB2-212ENST00000582788 SPANXDQ9BXN6 97 aa12.42□□□□□ -0.42
ERBB2-212ENST00000582788 SPANXCQ9NY87 97 aa12.42□□□□□ -0.42
ERBB2-212ENST00000582788 TRBV30A0A0K0K1B3 111 aa12.4□□□□□ -0.42
ERBB2-212ENST00000582788 GAGE5Q13069 117 aa12.4□□□□□ -0.42
ERBB2-212ENST00000582788 GAGE6Q13070 117 aa12.4□□□□□ -0.42
ERBB2-212ENST00000582788 VSIG2Q96IQ7 327 aa12.4□□□□□ -0.42
ERBB2-212ENST00000582788 LINC00467Q9BRT7 94 aa12.4□□□□□ -0.42
ERBB2-212ENST00000582788 NDUFA12Q9UI09 145 aa12.4□□□□□ -0.42
ERBB2-212ENST00000582788 Q1RN00 199 aa12.4□□□□□ -0.42
ERBB2-212ENST00000582788 ADAMTSL4-AS1Q5T5F5 129 aa12.4□□□□□ -0.42
ERBB2-212ENST00000582788 C1orf158Q8N1D5 194 aa12.4□□□□□ -0.42
ERBB2-212ENST00000582788 LINC01620Q4KN68 170 aa12.39□□□□□ -0.43
ERBB2-212ENST00000582788 C11orf72Q8NBR9 251 aa12.39□□□□□ -0.43
ERBB2-212ENST00000582788 TENM1Q9UKZ4 2725 aa12.39□□□□□ -0.43
ERBB2-212ENST00000582788 TRIAP1O43715 76 aa12.38□□□□□ -0.43
ERBB2-212ENST00000582788 MIAQ16674 131 aa12.38□□□□□ -0.43
ERBB2-212ENST00000582788 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.38□□□□□ -0.43
ERBB2-212ENST00000582788 TRBV10-2A0A0K0K1G8 114 aa12.38□□□□□ -0.43
ERBB2-212ENST00000582788 IGKV2-29A2NJV5 120 aaPredicted RBP12.38□□□□□ -0.43
ERBB2-212ENST00000582788 SNCGO76070 127 aa12.38□□□□□ -0.43
ERBB2-212ENST00000582788 IGHV3-53P01767 116 aa12.38□□□□□ -0.43
ERBB2-212ENST00000582788 GAGE2BQ13066 116 aa12.38□□□□□ -0.43
ERBB2-212ENST00000582788 KRTAP21-3Q3LHN1 58 aa12.38□□□□□ -0.43
ERBB2-212ENST00000582788 GAGE2EQ4V326 116 aa12.38□□□□□ -0.43
ERBB2-212ENST00000582788 GAGE2DQ9UEU5 116 aa12.38□□□□□ -0.43
ERBB2-212ENST00000582788 GIG44P09565 113 aaPredicted RBP12.37□□□□□ -0.43
ERBB2-212ENST00000582788 DNAJC30Q96LL9 226 aa12.37□□□□□ -0.43
ERBB2-212ENST00000582788 ATRQ13535 2644 aa12.37□□□□□ -0.43
ERBB2-212ENST00000582788 IGHV3OR16-12A0A075B7B8 117 aa12.36□□□□□ -0.43
ERBB2-212ENST00000582788 A8MZ25 164 aa12.36□□□□□ -0.43
ERBB2-212ENST00000582788 PRSS2P07478 247 aa12.36□□□□□ -0.43
ERBB2-212ENST00000582788 RPL35AP18077 110 aaKnown RBP12.35□□□□□ -0.43
ERBB2-212ENST00000582788 MRPL23Q16540 153 aaKnown RBP12.35□□□□□ -0.43
ERBB2-212ENST00000582788 VWFP04275 2813 aa12.35□□□□□ -0.43
ERBB2-212ENST00000582788 RS1O15537 224 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms