RNA–Protein interactions for RNA: ENST00000582594.5

PPP4R1-222, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene PPP4R1, Length 2,982 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-222ENST00000582594 CUBNO60494 3623 aa6.91□□□□□ -1.3
PPP4R1-222ENST00000582594 IGHV3OR16-12A0A075B7B8 117 aa6.9□□□□□ -1.3
PPP4R1-222ENST00000582594 TIMM17BO60830 172 aa6.9□□□□□ -1.3
PPP4R1-222ENST00000582594 CCL19Q99731 98 aa6.9□□□□□ -1.3
PPP4R1-222ENST00000582594 CACNA1AO00555 2505 aa6.9□□□□□ -1.3
PPP4R1-222ENST00000582594 LINC00694P0DN24 101 aa6.9□□□□□ -1.3
PPP4R1-222ENST00000582594 SLURP1P55000 103 aa6.9□□□□□ -1.3
PPP4R1-222ENST00000582594 ATP5J2P56134 94 aa6.9□□□□□ -1.3
PPP4R1-222ENST00000582594 ZNF415Q09FC8 603 aa6.9□□□□□ -1.3
PPP4R1-222ENST00000582594 CHD8Q9HCK8 2581 aa6.9□□□□□ -1.31
PPP4R1-222ENST00000582594 NOTCH3Q9UM47 2321 aa6.9□□□□□ -1.31
PPP4R1-222ENST00000582594 BAALC-AS2P0C853 105 aa6.9□□□□□ -1.31
PPP4R1-222ENST00000582594 PIK3CD-AS1Q5SR53 167 aa6.9□□□□□ -1.31
PPP4R1-222ENST00000582594 FAM218AQ96MZ4 157 aa6.9□□□□□ -1.31
PPP4R1-222ENST00000582594 EDA2RQ9HAV5 297 aa6.9□□□□□ -1.31
PPP4R1-222ENST00000582594 C2CD3Q4AC94 2353 aa6.89□□□□□ -1.31
PPP4R1-222ENST00000582594 LINC00242Q5T6M2 205 aa6.89□□□□□ -1.31
PPP4R1-222ENST00000582594 PRIMA1Q86XR5 153 aa6.89□□□□□ -1.31
PPP4R1-222ENST00000582594 PRORYQ9H606 182 aa6.89□□□□□ -1.31
PPP4R1-222ENST00000582594 Q9HAA7 133 aa6.89□□□□□ -1.31
PPP4R1-222ENST00000582594 TIRAPP58753 221 aa6.89□□□□□ -1.31
PPP4R1-222ENST00000582594 GNLYP22749 145 aa6.88□□□□□ -1.31
PPP4R1-222ENST00000582594 IGHV3-53P01767 116 aa6.88□□□□□ -1.31
PPP4R1-222ENST00000582594 MAPK1IP1LQ8NDC0 245 aa6.88□□□□□ -1.31
PPP4R1-222ENST00000582594 SMIM1B2RUZ4 78 aa6.87□□□□□ -1.31
PPP4R1-222ENST00000582594 RS1O15537 224 aa6.87□□□□□ -1.31
PPP4R1-222ENST00000582594 C9orf153Q5TBE3 101 aa6.87□□□□□ -1.31
PPP4R1-222ENST00000582594 GAGE2AQ6NT46 116 aa6.87□□□□□ -1.31
PPP4R1-222ENST00000582594 IGLV5-45A0A087WSX0 123 aa6.87□□□□□ -1.31
PPP4R1-222ENST00000582594 NRGNQ92686 78 aa6.87□□□□□ -1.31
PPP4R1-222ENST00000582594 IGLV5-39A0A0G2JS06 123 aa6.87□□□□□ -1.31
PPP4R1-222ENST00000582594 HERVK_113P63121 156 aa6.87□□□□□ -1.31
PPP4R1-222ENST00000582594 C11orf72Q8NBR9 251 aa6.87□□□□□ -1.31
PPP4R1-222ENST00000582594 SPTBN4Q9H254 2564 aa6.86□□□□□ -1.31
PPP4R1-222ENST00000582594 TMEM89A2RUT3 159 aa6.86□□□□□ -1.31
PPP4R1-222ENST00000582594 ACYP1P07311 99 aa6.86□□□□□ -1.31
PPP4R1-222ENST00000582594 PPDPFQ9H3Y8 114 aa6.86□□□□□ -1.31
PPP4R1-222ENST00000582594 KLK5Q9Y337 293 aaPredicted RBP6.86□□□□□ -1.31
PPP4R1-222ENST00000582594 C22orf24Q9Y442 160 aa6.86□□□□□ -1.31
PPP4R1-222ENST00000582594 BEAN1Q3B7T3 259 aa6.86□□□□□ -1.31
PPP4R1-222ENST00000582594 LINC00643Q86TS7 51 aa6.86□□□□□ -1.31
PPP4R1-222ENST00000582594 UBE2E2Q96LR5 201 aa6.86□□□□□ -1.31
PPP4R1-222ENST00000582594 XCL2Q9UBD3 114 aa6.86□□□□□ -1.31
PPP4R1-222ENST00000582594 ZANQ9Y493 2812 aa6.85□□□□□ -1.31
PPP4R1-222ENST00000582594 RNF152Q8N8N0 203 aa6.85□□□□□ -1.31
PPP4R1-222ENST00000582594 DNAJC30Q96LL9 226 aa6.85□□□□□ -1.31
PPP4R1-222ENST00000582594 TRGV1A0A0A0MS02 117 aa6.85□□□□□ -1.31
PPP4R1-222ENST00000582594 IGKV3OR2-268A0A0C4DH90 116 aa6.85□□□□□ -1.31
PPP4R1-222ENST00000582594 WNK1Q9H4A3 2382 aa6.85□□□□□ -1.31
PPP4R1-222ENST00000582594 KHDC1LQ5JSQ8 128 aa6.84□□□□□ -1.31
PPP4R1-222ENST00000582594 TMEM126AQ9H061 195 aa6.84□□□□□ -1.31
PPP4R1-222ENST00000582594 USP9YO00507 2555 aaPredicted RBP6.84□□□□□ -1.31
PPP4R1-222ENST00000582594 C3orf22Q8N5N4 141 aa6.84□□□□□ -1.31
PPP4R1-222ENST00000582594 MAP6D1Q9H9H5 199 aa6.84□□□□□ -1.31
PPP4R1-222ENST00000582594 VPREB3Q9UKI3 123 aa6.84□□□□□ -1.31
PPP4R1-222ENST00000582594 B4DSR2 109 aa6.84□□□□□ -1.32
PPP4R1-222ENST00000582594 TRACP01848 142 aa6.84□□□□□ -1.32
PPP4R1-222ENST00000582594 NTM-AS1Q6ZSK4 140 aa6.84□□□□□ -1.32
PPP4R1-222ENST00000582594 Q96MF0 132 aa6.84□□□□□ -1.32
PPP4R1-222ENST00000582594 IMUPQ9GZP8 106 aa6.84□□□□□ -1.32
PPP4R1-222ENST00000582594 TOMM7Q9P0U1 55 aa6.84□□□□□ -1.32
PPP4R1-222ENST00000582594 C9orf129Q5T035 196 aaKnown RBP6.83□□□□□ -1.32
PPP4R1-222ENST00000582594 LOC107984640A0A0U1RRK4 108 aa6.83□□□□□ -1.32
PPP4R1-222ENST00000582594 UTP20O75691 2785 aaKnown RBP6.83□□□□□ -1.32
PPP4R1-222ENST00000582594 INSP01308 110 aa6.82□□□□□ -1.32
PPP4R1-222ENST00000582594 MALP21145 153 aa6.82□□□□□ -1.32
PPP4R1-222ENST00000582594 SDIM1Q6ZPB5 146 aa6.82□□□□□ -1.32
PPP4R1-222ENST00000582594 A0A087WYN8 130 aa6.82□□□□□ -1.32
PPP4R1-222ENST00000582594 F5H768 121 aa6.82□□□□□ -1.32
PPP4R1-222ENST00000582594 MIR7-3HGQ8N6C7 128 aa6.82□□□□□ -1.32
PPP4R1-222ENST00000582594 LINC00337Q8N6G1 96 aa6.82□□□□□ -1.32
PPP4R1-222ENST00000582594 DYNLRB2Q8TF09 96 aa6.82□□□□□ -1.32
PPP4R1-222ENST00000582594 ZNF702PQ9H963 129 aa6.82□□□□□ -1.32
PPP4R1-222ENST00000582594 PEMTQ9UBM1 199 aa6.82□□□□□ -1.32
PPP4R1-222ENST00000582594 POLQO75417 2590 aa6.82□□□□□ -1.32
PPP4R1-222ENST00000582594 IGKV3D-7A0A0C4DH55 119 aa6.81□□□□□ -1.32
PPP4R1-222ENST00000582594 CRPP02741 224 aa6.81□□□□□ -1.32
PPP4R1-222ENST00000582594 ATP5G1P05496 136 aa6.81□□□□□ -1.32
PPP4R1-222ENST00000582594 COPS9Q8WXC6 57 aa6.81□□□□□ -1.32
PPP4R1-222ENST00000582594 C14orf132Q9NPU4 83 aa6.81□□□□□ -1.32
PPP4R1-222ENST00000582594 HIST2H2BCQ6DN03 193 aa6.81□□□□□ -1.32
PPP4R1-222ENST00000582594 Q6ZTI0 123 aa6.81□□□□□ -1.32
PPP4R1-222ENST00000582594 CDC42SE2Q9NRR3 84 aa6.81□□□□□ -1.32
PPP4R1-222ENST00000582594 A8MTW9 85 aa6.81□□□□□ -1.32
PPP4R1-222ENST00000582594 UQCRQO14949 82 aa6.81□□□□□ -1.32
PPP4R1-222ENST00000582594 RPL36AP83881 106 aaKnown RBP6.81□□□□□ -1.32
PPP4R1-222ENST00000582594 RPL36ALQ969Q0 106 aaKnown RBP6.81□□□□□ -1.32
PPP4R1-222ENST00000582594 ITPR1Q14643 2758 aa6.8□□□□□ -1.32
PPP4R1-222ENST00000582594 MYO9AB2RTY4 2548 aa6.8□□□□□ -1.32
PPP4R1-222ENST00000582594 MXRA5Q9NR99 2828 aa6.8□□□□□ -1.32
PPP4R1-222ENST00000582594 IGKV2-28A0A075B6P5 120 aa6.8□□□□□ -1.32
PPP4R1-222ENST00000582594 IGKV2D-28P01615 120 aa6.8□□□□□ -1.32
PPP4R1-222ENST00000582594 INAFM2P0DMQ5 153 aa6.8□□□□□ -1.32
PPP4R1-222ENST00000582594 LINC00158P58513 81 aa6.8□□□□□ -1.32
PPP4R1-222ENST00000582594 C5orf38Q86SI9 138 aa6.8□□□□□ -1.32
PPP4R1-222ENST00000582594 SND1-IT1Q9HBX3 110 aa6.8□□□□□ -1.32
PPP4R1-222ENST00000582594 LOC100131303A0A0U1RQF7 123 aa6.79□□□□□ -1.32
PPP4R1-222ENST00000582594 K7EQD1 137 aa6.79□□□□□ -1.32
PPP4R1-222ENST00000582594 UBE2L6O14933 153 aa6.79□□□□□ -1.32
PPP4R1-222ENST00000582594 DNAL4O96015 105 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms