RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 AMELXQ99217 191 aa4.22□□□□□ -1.73
RNU4ATAC-201ENST00000580972 TTTY13Q9BZ97 58 aa4.22□□□□□ -1.73
RNU4ATAC-201ENST00000580972 SPANXA1Q9NS26 97 aa4.22□□□□□ -1.73
RNU4ATAC-201ENST00000580972 NBEAL1Q6ZS30 2694 aa4.21□□□□□ -1.73
RNU4ATAC-201ENST00000580972 TRAV9-2A0A087WT02 112 aa4.21□□□□□ -1.74
RNU4ATAC-201ENST00000580972 IGKV2D-26A0A0A0MRZ7 120 aa4.21□□□□□ -1.74
RNU4ATAC-201ENST00000580972 TRAV13-1A0A0B4J241 112 aa4.21□□□□□ -1.74
RNU4ATAC-201ENST00000580972 IGLL5B9A064 214 aa4.21□□□□□ -1.74
RNU4ATAC-201ENST00000580972 TMEM262E9PQX1 116 aa4.21□□□□□ -1.74
RNU4ATAC-201ENST00000580972 UBE2L6O14933 153 aa4.21□□□□□ -1.74
RNU4ATAC-201ENST00000580972 DPM2O94777 84 aa4.21□□□□□ -1.74
RNU4ATAC-201ENST00000580972 IGHV3-30P01768 117 aa4.21□□□□□ -1.74
RNU4ATAC-201ENST00000580972 IGHV3-33P01772 117 aa4.21□□□□□ -1.74
RNU4ATAC-201ENST00000580972 IGHV3-30-3P0DP02 117 aa4.21□□□□□ -1.74
RNU4ATAC-201ENST00000580972 IGHV3-30-5P0DP03 117 aa4.21□□□□□ -1.74
RNU4ATAC-201ENST00000580972 COX6A2Q02221 97 aa4.21□□□□□ -1.74
RNU4ATAC-201ENST00000580972 AMMECR1LQ6DCA0 310 aa4.21□□□□□ -1.74
RNU4ATAC-201ENST00000580972 MRPL52Q86TS9 123 aaKnown RBP4.21□□□□□ -1.74
RNU4ATAC-201ENST00000580972 WFDC10BQ8IUB3 73 aa4.21□□□□□ -1.74
RNU4ATAC-201ENST00000580972 OR5A1Q8NGJ0 315 aa4.21□□□□□ -1.74
RNU4ATAC-201ENST00000580972 VAMP8Q9BV40 100 aa4.21□□□□□ -1.74
RNU4ATAC-201ENST00000580972 PYGO1Q9Y3Y4 419 aa4.21□□□□□ -1.74
RNU4ATAC-201ENST00000580972 IGHV3-64A0A075B6Q5 118 aa4.2□□□□□ -1.74
RNU4ATAC-201ENST00000580972 F8VRH5 84 aa4.2□□□□□ -1.74
RNU4ATAC-201ENST00000580972 IGKCP01834 107 aa4.2□□□□□ -1.74
RNU4ATAC-201ENST00000580972 ZNF22P17026 224 aaPredicted RBP4.2□□□□□ -1.74
RNU4ATAC-201ENST00000580972 UBE2D1P51668 147 aa4.2□□□□□ -1.74
RNU4ATAC-201ENST00000580972 TSPEAR-AS2P59090 65 aa4.2□□□□□ -1.74
RNU4ATAC-201ENST00000580972 MRPS36P82909 103 aaKnown RBP4.2□□□□□ -1.74
RNU4ATAC-201ENST00000580972 LELP1Q5T871 98 aa4.2□□□□□ -1.74
RNU4ATAC-201ENST00000580972 ZFAND6Q6FIF0 208 aa4.2□□□□□ -1.74
RNU4ATAC-201ENST00000580972 DGAT2L7PQ6IED9 249 aa4.2□□□□□ -1.74
RNU4ATAC-201ENST00000580972 C14orf144Q96I85 54 aa4.2□□□□□ -1.74
RNU4ATAC-201ENST00000580972 CHAC1Q9BUX1 264 aa4.2□□□□□ -1.74
RNU4ATAC-201ENST00000580972 TIMM21Q9BVV7 248 aa4.2□□□□□ -1.74
RNU4ATAC-201ENST00000580972 VCX2Q9H322 139 aa4.2□□□□□ -1.74
RNU4ATAC-201ENST00000580972 CDC42SE2Q9NRR3 84 aa4.2□□□□□ -1.74
RNU4ATAC-201ENST00000580972 NACAE9PAV3 2078 aa4.2□□□□□ -1.74
RNU4ATAC-201ENST00000580972 SPINK8P0C7L1 97 aa4.19□□□□□ -1.74
RNU4ATAC-201ENST00000580972 NHLRC4P0CG21 123 aaPredicted RBP4.19□□□□□ -1.74
RNU4ATAC-201ENST00000580972 IGLC3P0DOY3 106 aa4.19□□□□□ -1.74
RNU4ATAC-201ENST00000580972 PCP2Q8IVA1 136 aa4.19□□□□□ -1.74
RNU4ATAC-201ENST00000580972 LINC00588Q9Y4M8 146 aa4.19□□□□□ -1.74
RNU4ATAC-201ENST00000580972 MEGF8Q7Z7M0 2845 aa4.19□□□□□ -1.74
RNU4ATAC-201ENST00000580972 PRKDCP78527 4128 aaKnown RBP4.19□□□□□ -1.74
RNU4ATAC-201ENST00000580972 LINC00587B1AMM8 73 aa4.18□□□□□ -1.74
RNU4ATAC-201ENST00000580972 H3BNG1 76 aa4.18□□□□□ -1.74
RNU4ATAC-201ENST00000580972 G0S2P27469 103 aa4.18□□□□□ -1.74
RNU4ATAC-201ENST00000580972 NMUP48645 174 aa4.18□□□□□ -1.74
RNU4ATAC-201ENST00000580972 S100A12P80511 92 aa4.18□□□□□ -1.74
RNU4ATAC-201ENST00000580972 TMEM97Q5BJF2 176 aa4.18□□□□□ -1.74
RNU4ATAC-201ENST00000580972 TMEM170BQ5T4T1 132 aa4.18□□□□□ -1.74
RNU4ATAC-201ENST00000580972 LINC00242Q5T6M2 205 aa4.18□□□□□ -1.74
RNU4ATAC-201ENST00000580972 NFE4Q86UQ8 179 aa4.18□□□□□ -1.74
RNU4ATAC-201ENST00000580972 LINC00269Q8N2A0 174 aa4.18□□□□□ -1.74
RNU4ATAC-201ENST00000580972 MAPKAPK5-AS1Q8N8E1 139 aa4.18□□□□□ -1.74
RNU4ATAC-201ENST00000580972 TMEM101Q96IK0 257 aa4.18□□□□□ -1.74
RNU4ATAC-201ENST00000580972 IGLV10-54A0A075B6I4 117 aa4.17□□□□□ -1.74
RNU4ATAC-201ENST00000580972 TRAV8-3A0A0A6YYJ7 113 aa4.17□□□□□ -1.74
RNU4ATAC-201ENST00000580972 H7C423 109 aa4.17□□□□□ -1.74
RNU4ATAC-201ENST00000580972 ANGP03950 147 aaKnown RBP4.17□□□□□ -1.74
RNU4ATAC-201ENST00000580972 PLNP26678 52 aa4.17□□□□□ -1.74
RNU4ATAC-201ENST00000580972 TIRAPP58753 221 aa4.17□□□□□ -1.74
RNU4ATAC-201ENST00000580972 PKIAP61925 76 aa4.17□□□□□ -1.74
RNU4ATAC-201ENST00000580972 SH2D6Q7Z4S9 175 aa4.17□□□□□ -1.74
RNU4ATAC-201ENST00000580972 LINC00469Q8N7U9 141 aa4.17□□□□□ -1.74
RNU4ATAC-201ENST00000580972 CDKN2A-AS1Q9UH64 79 aa4.17□□□□□ -1.74
RNU4ATAC-201ENST00000580972 KLK12Q9UKR0 248 aa4.17□□□□□ -1.74
RNU4ATAC-201ENST00000580972 APLNQ9ULZ1 77 aa4.17□□□□□ -1.74
RNU4ATAC-201ENST00000580972 CSDC2Q9Y534 153 aaKnown RBP4.17□□□□□ -1.74
RNU4ATAC-201ENST00000580972 FBN3Q75N90 2809 aa4.17□□□□□ -1.74
RNU4ATAC-201ENST00000580972 TRAV8-6A0A0B4J262 113 aa4.16□□□□□ -1.74
RNU4ATAC-201ENST00000580972 LINC00959A0A1B0GUT2 108 aa4.16□□□□□ -1.74
RNU4ATAC-201ENST00000580972 TINCRA0A1B0GVN0 87 aa4.16□□□□□ -1.74
RNU4ATAC-201ENST00000580972 TMEM223A0PJW6 202 aa4.16□□□□□ -1.74
RNU4ATAC-201ENST00000580972 LINC01549A6NIU2 74 aa4.16□□□□□ -1.74
RNU4ATAC-201ENST00000580972 HSBP1L1C9JCN9 74 aa4.16□□□□□ -1.74
RNU4ATAC-201ENST00000580972 CCL25O15444 150 aa4.16□□□□□ -1.74
RNU4ATAC-201ENST00000580972 ZNF25P17030 456 aaPredicted RBP4.16□□□□□ -1.74
RNU4ATAC-201ENST00000580972 XCL1P47992 114 aa4.16□□□□□ -1.74
RNU4ATAC-201ENST00000580972 ENHOQ6UWT2 76 aa4.16□□□□□ -1.74
RNU4ATAC-201ENST00000580972 C5orf38Q86SI9 138 aa4.16□□□□□ -1.74
RNU4ATAC-201ENST00000580972 C15orf53Q8NAA6 179 aa4.16□□□□□ -1.74
RNU4ATAC-201ENST00000580972 PLEKHB2Q96CS7 222 aa4.16□□□□□ -1.74
RNU4ATAC-201ENST00000580972 C2orf88Q9BSF0 95 aa4.16□□□□□ -1.74
RNU4ATAC-201ENST00000580972 MRPS16Q9Y3D3 137 aaKnown RBP4.16□□□□□ -1.74
RNU4ATAC-201ENST00000580972 IGLV5-45A0A087WSX0 123 aa4.15□□□□□ -1.75
RNU4ATAC-201ENST00000580972 A0A1B0GUV1 79 aa4.15□□□□□ -1.75
RNU4ATAC-201ENST00000580972 NPSP0C0P6 89 aa4.15□□□□□ -1.75
RNU4ATAC-201ENST00000580972 COX8AP10176 69 aa4.15□□□□□ -1.75
RNU4ATAC-201ENST00000580972 REG3AQ06141 175 aa4.15□□□□□ -1.75
RNU4ATAC-201ENST00000580972 PAPPA-AS1Q5QFB9 102 aa4.15□□□□□ -1.75
RNU4ATAC-201ENST00000580972 C2orf91Q6ZV80 131 aa4.15□□□□□ -1.75
RNU4ATAC-201ENST00000580972 CHCHD10Q8WYQ3 142 aaPredicted RBP4.15□□□□□ -1.75
RNU4ATAC-201ENST00000580972 UBE2WQ96B02 151 aa4.15□□□□□ -1.75
RNU4ATAC-201ENST00000580972 MIEN1Q9BRT3 115 aa4.15□□□□□ -1.75
RNU4ATAC-201ENST00000580972 KRTAP1-5Q9BYS1 174 aa4.15□□□□□ -1.75
RNU4ATAC-201ENST00000580972 GEMIN7Q9H840 131 aaKnown RBP4.15□□□□□ -1.75
RNU4ATAC-201ENST00000580972 GAGE12HA6NDE8 117 aa4.14□□□□□ -1.75
RNU4ATAC-201ENST00000580972 SMIM1B2RUZ4 78 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms