RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 MRPL51Q4U2R6 128 aaKnown RBP14.75□□□□□ -0.05
VAPA-205ENST00000578314 C15orf56Q8N910 161 aa14.75□□□□□ -0.05
VAPA-205ENST00000578314 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.74□□□□□ -0.05
VAPA-205ENST00000578314 C7orf77A4D0Y5 90 aa14.74□□□□□ -0.05
VAPA-205ENST00000578314 LINC00862A6NCI5 91 aa14.74□□□□□ -0.05
VAPA-205ENST00000578314 CDC42SE2Q9NRR3 84 aa14.74□□□□□ -0.05
VAPA-205ENST00000578314 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.74□□□□□ -0.05
VAPA-205ENST00000578314 PPP1R2P9O14990 202 aa14.73□□□□□ -0.05
VAPA-205ENST00000578314 KRTAP10-4P60372 401 aaPredicted RBP14.73□□□□□ -0.05
VAPA-205ENST00000578314 FOXI1Q12951 378 aa14.73□□□□□ -0.05
VAPA-205ENST00000578314 LINC00959A0A1B0GUT2 108 aa14.72□□□□□ -0.05
VAPA-205ENST00000578314 TRBV24-1A0A075B6N3 115 aa14.71□□□□□ -0.05
VAPA-205ENST00000578314 IGHV3-64A0A075B6Q5 118 aa14.71□□□□□ -0.05
VAPA-205ENST00000578314 PANO1I0J062 215 aa14.71□□□□□ -0.05
VAPA-205ENST00000578314 S100A8P05109 93 aa14.71□□□□□ -0.05
VAPA-205ENST00000578314 FCER1GP30273 86 aa14.71□□□□□ -0.05
VAPA-205ENST00000578314 CIRBPQ14011 172 aaKnown RBP14.71□□□□□ -0.05
VAPA-205ENST00000578314 KIR2DL4Q99706 377 aa14.71□□□□□ -0.05
VAPA-205ENST00000578314 C20orf78Q9BR46 151 aa14.71□□□□□ -0.05
VAPA-205ENST00000578314 A0A1B0GXF2 115 aa14.7□□□□□ -0.06
VAPA-205ENST00000578314 HBBP68871 147 aa14.7□□□□□ -0.06
VAPA-205ENST00000578314 ZNF664Q8N3J9 261 aa14.7□□□□□ -0.06
VAPA-205ENST00000578314 CSDC2Q9Y534 153 aaKnown RBP14.7□□□□□ -0.06
VAPA-205ENST00000578314 CKS2P33552 79 aa14.69□□□□□ -0.06
VAPA-205ENST00000578314 RPL32P62910 135 aaKnown RBP14.69□□□□□ -0.06
VAPA-205ENST00000578314 MRPL54Q6P161 138 aaKnown RBP14.69□□□□□ -0.06
VAPA-205ENST00000578314 GVQW2A0A096LPI5 108 aaPredicted RBP14.68□□□□□ -0.06
VAPA-205ENST00000578314 F8W036 122 aa14.68□□□□□ -0.06
VAPA-205ENST00000578314 CCL25O15444 150 aa14.68□□□□□ -0.06
VAPA-205ENST00000578314 XCL1P47992 114 aa14.68□□□□□ -0.06
VAPA-205ENST00000578314 RAB14P61106 215 aa14.68□□□□□ -0.06
VAPA-205ENST00000578314 SS18Q15532 418 aa14.67□□□□□ -0.06
VAPA-205ENST00000578314 HIGD2BQ4VC39 106 aa14.67□□□□□ -0.06
VAPA-205ENST00000578314 UBE2D4Q9Y2X8 147 aa14.67□□□□□ -0.06
VAPA-205ENST00000578314 J3QL48 77 aa14.66□□□□□ -0.06
VAPA-205ENST00000578314 TNFRSF6BO95407 300 aa14.66□□□□□ -0.06
VAPA-205ENST00000578314 SMAGPQ0VAQ4 97 aa14.66□□□□□ -0.06
VAPA-205ENST00000578314 CD164L2Q6UWJ8 174 aa14.65□□□□□ -0.06
VAPA-205ENST00000578314 ATP5L2Q7Z4Y8 100 aa14.65□□□□□ -0.06
VAPA-205ENST00000578314 D6R8Y8 96 aa14.64□□□□□ -0.07
VAPA-205ENST00000578314 TCAPO15273 167 aa14.64□□□□□ -0.07
VAPA-205ENST00000578314 PNRC1Q12796 327 aaPredicted RBP14.64□□□□□ -0.07
VAPA-205ENST00000578314 TIMM21Q9BVV7 248 aa14.64□□□□□ -0.07
VAPA-205ENST00000578314 IGHV1-58A0A0C4DH39 117 aa14.63□□□□□ -0.07
VAPA-205ENST00000578314 PHOX2AO14813 284 aa14.63□□□□□ -0.07
VAPA-205ENST00000578314 PPBPP02775 128 aa14.63□□□□□ -0.07
VAPA-205ENST00000578314 TMEM18Q96B42 140 aa14.63□□□□□ -0.07
VAPA-205ENST00000578314 C1orf196B1AJZ1 125 aa14.62□□□□□ -0.07
VAPA-205ENST00000578314 SPACA4Q8TDM5 124 aa14.62□□□□□ -0.07
VAPA-205ENST00000578314 SMIM2Q9BVW6 85 aa14.62□□□□□ -0.07
VAPA-205ENST00000578314 KRTAP29-1A8MX34 341 aaPredicted RBP14.61□□□□□ -0.07
VAPA-205ENST00000578314 RPL37AP61513 92 aaKnown RBP14.61□□□□□ -0.07
VAPA-205ENST00000578314 ANAPC16Q96DE5 110 aa14.61□□□□□ -0.07
VAPA-205ENST00000578314 NPYP01303 97 aa14.6□□□□□ -0.07
VAPA-205ENST00000578314 CHTF8P0CG12 524 aa14.6□□□□□ -0.07
VAPA-205ENST00000578314 COX6A2Q02221 97 aa14.6□□□□□ -0.07
VAPA-205ENST00000578314 CLLU1Q5K131 121 aa14.6□□□□□ -0.07
VAPA-205ENST00000578314 DPH3Q96FX2 82 aa14.6□□□□□ -0.07
VAPA-205ENST00000578314 A0A087WYN8 130 aa14.59□□□□□ -0.07
VAPA-205ENST00000578314 MT-ND4LP03901 98 aa14.59□□□□□ -0.07
VAPA-205ENST00000578314 TMEM136Q6ZRR5 245 aa14.58□□□□□ -0.08
VAPA-205ENST00000578314 ORMDL3Q8N138 153 aa14.58□□□□□ -0.08
VAPA-205ENST00000578314 PRSS3P2Q8NHM4 247 aa14.58□□□□□ -0.08
VAPA-205ENST00000578314 LRP1Q07954 4544 aaKnown RBP14.58□□□□□ -0.08
VAPA-205ENST00000578314 RNASE13Q5GAN3 156 aaKnown RBP14.57□□□□□ -0.08
VAPA-205ENST00000578314 Q6ZUT4 128 aa14.57□□□□□ -0.08
VAPA-205ENST00000578314 PLAC8Q9NZF1 115 aa14.57□□□□□ -0.08
VAPA-205ENST00000578314 TRAV13-1A0A0B4J241 112 aa14.56□□□□□ -0.08
VAPA-205ENST00000578314 RPL39P62891 51 aaKnown RBP14.56□□□□□ -0.08
VAPA-205ENST00000578314 FAM104AQ969W3 186 aa14.56□□□□□ -0.08
VAPA-205ENST00000578314 FAT3Q8TDW7 4589 aa14.56□□□□□ -0.08
VAPA-205ENST00000578314 PKHD1L1Q86WI1 4243 aa14.55□□□□□ -0.08
VAPA-205ENST00000578314 LINC00526Q96FQ7 95 aa14.55□□□□□ -0.08
VAPA-205ENST00000578314 PRELID3AQ96N28 172 aa14.55□□□□□ -0.08
VAPA-205ENST00000578314 SPANXA1Q9NS26 97 aa14.55□□□□□ -0.08
VAPA-205ENST00000578314 PRSS47A8MTI9 375 aa14.54□□□□□ -0.08
VAPA-205ENST00000578314 ZNF561-AS1K7EIQ3 104 aa14.54□□□□□ -0.08
VAPA-205ENST00000578314 COX7A2LO14548 114 aa14.54□□□□□ -0.08
VAPA-205ENST00000578314 MALP21145 153 aa14.53□□□□□ -0.08
VAPA-205ENST00000578314 MRPS36P82909 103 aaKnown RBP14.52□□□□□ -0.09
VAPA-205ENST00000578314 CARD19Q96LW7 228 aa14.52□□□□□ -0.09
VAPA-205ENST00000578314 LAMTOR2Q9Y2Q5 125 aa14.52□□□□□ -0.09
VAPA-205ENST00000578314 IGKV2-24A0A0C4DH68 120 aa14.51□□□□□ -0.09
VAPA-205ENST00000578314 OXTP01178 125 aa14.51□□□□□ -0.09
VAPA-205ENST00000578314 HNRNPA3P51991 378 aaKnown RBP14.51□□□□□ -0.09
VAPA-205ENST00000578314 IFITM2Q01629 132 aa14.51□□□□□ -0.09
VAPA-205ENST00000578314 SYCNQ0VAF6 134 aa14.51□□□□□ -0.09
VAPA-205ENST00000578314 MAJINQ3KP22 176 aa14.51□□□□□ -0.09
VAPA-205ENST00000578314 PKIGQ9Y2B9 76 aa14.51□□□□□ -0.09
VAPA-205ENST00000578314 RAB5AP20339 215 aa14.5□□□□□ -0.09
VAPA-205ENST00000578314 UQCC3Q6UW78 93 aa14.5□□□□□ -0.09
VAPA-205ENST00000578314 IGLV4-69A0A075B6H9 119 aa14.49□□□□□ -0.09
VAPA-205ENST00000578314 A0A096LNI7 61 aa14.49□□□□□ -0.09
VAPA-205ENST00000578314 C5orf38Q86SI9 138 aa14.49□□□□□ -0.09
VAPA-205ENST00000578314 OPRPNQ99935 248 aaPredicted RBP14.49□□□□□ -0.09
VAPA-205ENST00000578314 LINC00474Q9P2X8 69 aa14.49□□□□□ -0.09
VAPA-205ENST00000578314 IMMP2LQ96T52 175 aa14.48□□□□□ -0.09
VAPA-205ENST00000578314 STPG4Q8N801 248 aa14.47□□□□□ -0.09
VAPA-205ENST00000578314 PYGO1Q9Y3Y4 419 aa14.47□□□□□ -0.09
VAPA-205ENST00000578314 TMEM218A2RU14 115 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms