RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-208	ENST00000578178	VCY	O14598	125 aa		7.07	□□□□□ -1.28
PPP4R1-208	ENST00000578178	CNBP	P62633	177 aa	Known RBP	7.07	□□□□□ -1.28
PPP4R1-208	ENST00000578178	CLLU1	Q5K131	121 aa		7.07	□□□□□ -1.28
PPP4R1-208	ENST00000578178	ATP5L2	Q7Z4Y8	100 aa		7.07	□□□□□ -1.28
PPP4R1-208	ENST00000578178	LINC00528	Q8N1L1	170 aa		7.07	□□□□□ -1.28
PPP4R1-208	ENST00000578178	C9orf163	Q8N9P6	203 aa		7.07	□□□□□ -1.28
PPP4R1-208	ENST00000578178	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	7.07	□□□□□ -1.28
PPP4R1-208	ENST00000578178	KIR2DL4	Q99706	377 aa		7.07	□□□□□ -1.28
PPP4R1-208	ENST00000578178	TMEM238L	A0A1B0GVL6	79 aa		7.06	□□□□□ -1.28
PPP4R1-208	ENST00000578178	CKS2	P33552	79 aa		7.06	□□□□□ -1.28
PPP4R1-208	ENST00000578178	C15orf56	Q8N910	161 aa		7.06	□□□□□ -1.28
PPP4R1-208	ENST00000578178	CIRBP-AS1	Q8TBR5	109 aa		7.06	□□□□□ -1.28
PPP4R1-208	ENST00000578178	C20orf78	Q9BR46	151 aa		7.06	□□□□□ -1.28
PPP4R1-208	ENST00000578178	AP5S1	Q9NUS5	200 aa		7.06	□□□□□ -1.28
PPP4R1-208	ENST00000578178	TRBV24-1	A0A075B6N3	115 aa		7.05	□□□□□ -1.28
PPP4R1-208	ENST00000578178	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	7.05	□□□□□ -1.28
PPP4R1-208	ENST00000578178		D6R8Y8	96 aa		7.05	□□□□□ -1.28
PPP4R1-208	ENST00000578178	PLA2G1B	P04054	148 aa	Known RBP	7.05	□□□□□ -1.28
PPP4R1-208	ENST00000578178	RPL32	P62910	135 aa	Known RBP	7.05	□□□□□ -1.28
PPP4R1-208	ENST00000578178	SMAGP	Q0VAQ4	97 aa		7.05	□□□□□ -1.28
PPP4R1-208	ENST00000578178	CFAP161	Q6P656	301 aa		7.05	□□□□□ -1.28
PPP4R1-208	ENST00000578178	LINC00959	A0A1B0GUT2	108 aa		7.04	□□□□□ -1.28
PPP4R1-208	ENST00000578178	TNFRSF6B	O95407	300 aa		7.04	□□□□□ -1.28
PPP4R1-208	ENST00000578178	PPBP	P02775	128 aa		7.04	□□□□□ -1.28
PPP4R1-208	ENST00000578178	XCL1	P47992	114 aa		7.04	□□□□□ -1.28
PPP4R1-208	ENST00000578178	FOXI1	Q12951	378 aa		7.04	□□□□□ -1.28
PPP4R1-208	ENST00000578178	ZNF664	Q8N3J9	261 aa		7.04	□□□□□ -1.28
PPP4R1-208	ENST00000578178	SMIM2	Q9BVW6	85 aa		7.04	□□□□□ -1.28
PPP4R1-208	ENST00000578178	CDC42SE2	Q9NRR3	84 aa		7.04	□□□□□ -1.28
PPP4R1-208	ENST00000578178	CSDC2	Q9Y534	153 aa	Known RBP	7.04	□□□□□ -1.28
PPP4R1-208	ENST00000578178	FLG2	Q5D862	2391 aa	Predicted RBP	7.04	□□□□□ -1.28
PPP4R1-208	ENST00000578178	GVQW2	A0A096LPI5	108 aa	Predicted RBP	7.03	□□□□□ -1.28
PPP4R1-208	ENST00000578178	PHOX2A	O14813	284 aa		7.03	□□□□□ -1.28
PPP4R1-208	ENST00000578178	TCAP	O15273	167 aa		7.03	□□□□□ -1.28
PPP4R1-208	ENST00000578178	CCL25	O15444	150 aa		7.03	□□□□□ -1.28
PPP4R1-208	ENST00000578178	NPY	P01303	97 aa		7.03	□□□□□ -1.28
PPP4R1-208	ENST00000578178	MT-ND4L	P03901	98 aa		7.03	□□□□□ -1.28
PPP4R1-208	ENST00000578178	SS18	Q15532	418 aa		7.03	□□□□□ -1.28
PPP4R1-208	ENST00000578178	HIGD2B	Q4VC39	106 aa		7.03	□□□□□ -1.28
PPP4R1-208	ENST00000578178	ORMDL3	Q8N138	153 aa		7.03	□□□□□ -1.28
PPP4R1-208	ENST00000578178	TMEM18	Q96B42	140 aa		7.03	□□□□□ -1.28
PPP4R1-208	ENST00000578178	UBE2D4	Q9Y2X8	147 aa		7.03	□□□□□ -1.28
PPP4R1-208	ENST00000578178	SRRM2	Q9UQ35	2752 aa	Known RBP	7.02	□□□□□ -1.29
PPP4R1-208	ENST00000578178	IGHV3-64	A0A075B6Q5	118 aa		7.02	□□□□□ -1.29
PPP4R1-208	ENST00000578178	SLPI	P03973	132 aa		7.02	□□□□□ -1.29
PPP4R1-208	ENST00000578178	IFITM2	Q01629	132 aa		7.02	□□□□□ -1.29
PPP4R1-208	ENST00000578178	UQCC3	Q6UW78	93 aa		7.02	□□□□□ -1.29
PPP4R1-208	ENST00000578178	SDIM1	Q6ZPB5	146 aa		7.02	□□□□□ -1.29
PPP4R1-208	ENST00000578178		Q6ZUT4	128 aa		7.02	□□□□□ -1.29
PPP4R1-208	ENST00000578178	TIMM21	Q9BVV7	248 aa		7.02	□□□□□ -1.29
PPP4R1-208	ENST00000578178	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	7.02	□□□□□ -1.29
PPP4R1-208	ENST00000578178	C21orf62-AS1	Q17RA5	79 aa		7.01	□□□□□ -1.29
PPP4R1-208	ENST00000578178	CD164L2	Q6UWJ8	174 aa		7.01	□□□□□ -1.29
PPP4R1-208	ENST00000578178	DMBT1	Q9UGM3	2413 aa	Predicted RBP	7	□□□□□ -1.29
PPP4R1-208	ENST00000578178	MYCBP2	O75592	4640 aa		7	□□□□□ -1.29
PPP4R1-208	ENST00000578178	IGHV1-58	A0A0C4DH39	117 aa		7	□□□□□ -1.29
PPP4R1-208	ENST00000578178	PANO1	I0J062	215 aa		7	□□□□□ -1.29
PPP4R1-208	ENST00000578178	ADCYAP1	P18509	176 aa		7	□□□□□ -1.29
PPP4R1-208	ENST00000578178	CIRBP	Q14011	172 aa	Known RBP	7	□□□□□ -1.29
PPP4R1-208	ENST00000578178	RNASE13	Q5GAN3	156 aa	Known RBP	7	□□□□□ -1.29
PPP4R1-208	ENST00000578178	TMEM136	Q6ZRR5	245 aa		7	□□□□□ -1.29
PPP4R1-208	ENST00000578178	PRELID3A	Q96N28	172 aa		7	□□□□□ -1.29
PPP4R1-208	ENST00000578178	C1orf196	B1AJZ1	125 aa		6.99	□□□□□ -1.29
PPP4R1-208	ENST00000578178	RPL39	P62891	51 aa	Known RBP	6.99	□□□□□ -1.29
PPP4R1-208	ENST00000578178	SPANXA1	Q9NS26	97 aa		6.99	□□□□□ -1.29
PPP4R1-208	ENST00000578178	LAMTOR2	Q9Y2Q5	125 aa		6.99	□□□□□ -1.29
PPP4R1-208	ENST00000578178	TRAV13-1	A0A0B4J241	112 aa		6.98	□□□□□ -1.29
PPP4R1-208	ENST00000578178	TMEM218	A2RU14	115 aa		6.98	□□□□□ -1.29
PPP4R1-208	ENST00000578178	CHTF8	P0CG12	524 aa		6.98	□□□□□ -1.29
PPP4R1-208	ENST00000578178	KRTAP10-4	P60372	401 aa	Predicted RBP	6.98	□□□□□ -1.29
PPP4R1-208	ENST00000578178	SPACA4	Q8TDM5	124 aa		6.98	□□□□□ -1.29
PPP4R1-208	ENST00000578178	IMMP2L	Q96T52	175 aa		6.98	□□□□□ -1.29
PPP4R1-208	ENST00000578178	COX7A2L	O14548	114 aa		6.97	□□□□□ -1.29
PPP4R1-208	ENST00000578178	RAB5A	P20339	215 aa		6.97	□□□□□ -1.29
PPP4R1-208	ENST00000578178	MRPS36	P82909	103 aa	Known RBP	6.97	□□□□□ -1.29
PPP4R1-208	ENST00000578178	CARD19	Q96LW7	228 aa		6.97	□□□□□ -1.29
PPP4R1-208	ENST00000578178	CTDSP1	Q9GZU7	261 aa		6.97	□□□□□ -1.29
PPP4R1-208	ENST00000578178	MAP1LC3A	Q9H492	121 aa		6.97	□□□□□ -1.29
PPP4R1-208	ENST00000578178	PRSS47	A8MTI9	375 aa		6.96	□□□□□ -1.3
PPP4R1-208	ENST00000578178	ZNF561-AS1	K7EIQ3	104 aa		6.96	□□□□□ -1.3
PPP4R1-208	ENST00000578178	MAL	P21145	153 aa		6.96	□□□□□ -1.3
PPP4R1-208	ENST00000578178	RPL37A	P61513	92 aa	Known RBP	6.96	□□□□□ -1.3
PPP4R1-208	ENST00000578178	COX6A2	Q02221	97 aa		6.96	□□□□□ -1.3
PPP4R1-208	ENST00000578178	COMMD7	Q86VX2	200 aa		6.96	□□□□□ -1.3
PPP4R1-208	ENST00000578178	LINC00526	Q96FQ7	95 aa		6.96	□□□□□ -1.3
PPP4R1-208	ENST00000578178	SEC11C	Q9BY50	192 aa		6.96	□□□□□ -1.3
PPP4R1-208	ENST00000578178	PKIG	Q9Y2B9	76 aa		6.96	□□□□□ -1.3
PPP4R1-208	ENST00000578178	TRAV9-1	A0A075B6T8	112 aa		6.95	□□□□□ -1.3
PPP4R1-208	ENST00000578178		A0A087WYN8	130 aa		6.95	□□□□□ -1.3
PPP4R1-208	ENST00000578178	LOC389332	A0A1B0GUA5	103 aa		6.95	□□□□□ -1.3
PPP4R1-208	ENST00000578178	IFITM10	A6NMD0	228 aa		6.95	□□□□□ -1.3
PPP4R1-208	ENST00000578178	IFI27	P40305	119 aa	Predicted RBP	6.95	□□□□□ -1.3
PPP4R1-208	ENST00000578178	PRSS3P2	Q8NHM4	247 aa		6.95	□□□□□ -1.3
PPP4R1-208	ENST00000578178	FAM104A	Q969W3	186 aa		6.95	□□□□□ -1.3
PPP4R1-208	ENST00000578178	KRTAP3-3	Q9BYR6	98 aa		6.95	□□□□□ -1.3
PPP4R1-208	ENST00000578178	KRTAP3-2	Q9BYR7	98 aa		6.95	□□□□□ -1.3
PPP4R1-208	ENST00000578178	IGKV2-24	A0A0C4DH68	120 aa		6.94	□□□□□ -1.3
PPP4R1-208	ENST00000578178	APOM	O95445	188 aa		6.94	□□□□□ -1.3
PPP4R1-208	ENST00000578178	SYCN	Q0VAF6	134 aa		6.94	□□□□□ -1.3
PPP4R1-208	ENST00000578178		Q8N8P6	123 aa		6.94	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms