RNA–Protein interactions for RNA: ENST00000569732.1

CNOT1-218, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 906 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-218ENST00000569732 KRTAP29-1A8MX34 341 aaPredicted RBP4.78□□□□□ -1.64
CNOT1-218ENST00000569732 SMKR1H3BMG3 65 aa4.78□□□□□ -1.64
CNOT1-218ENST00000569732 MRPL51Q4U2R6 128 aaKnown RBP4.78□□□□□ -1.64
CNOT1-218ENST00000569732 TMEM136Q6ZRR5 245 aa4.78□□□□□ -1.64
CNOT1-218ENST00000569732 SMIM15Q7Z3B0 74 aa4.78□□□□□ -1.64
CNOT1-218ENST00000569732 SH2D6Q7Z4S9 175 aa4.78□□□□□ -1.64
CNOT1-218ENST00000569732 ATP6V0E2Q8NHE4 81 aa4.78□□□□□ -1.64
CNOT1-218ENST00000569732 MRAP2Q96G30 205 aa4.78□□□□□ -1.64
CNOT1-218ENST00000569732 DNAJC30Q96LL9 226 aa4.78□□□□□ -1.64
CNOT1-218ENST00000569732 GTSF1LQ9H1H1 148 aa4.78□□□□□ -1.64
CNOT1-218ENST00000569732 URGCP-MRPS24S4R325 110 aa4.78□□□□□ -1.64
CNOT1-218ENST00000569732 TGIF2-C20orf24A0A0A6YYL0 155 aa4.77□□□□□ -1.65
CNOT1-218ENST00000569732 H7C1H1 209 aa4.77□□□□□ -1.65
CNOT1-218ENST00000569732 SIVA1O15304 175 aa4.77□□□□□ -1.65
CNOT1-218ENST00000569732 NCR2O95944 276 aa4.77□□□□□ -1.65
CNOT1-218ENST00000569732 S100A8P05109 93 aa4.77□□□□□ -1.65
CNOT1-218ENST00000569732 KRTAP10-1P60331 282 aa4.77□□□□□ -1.65
CNOT1-218ENST00000569732 RPL36AP83881 106 aaKnown RBP4.77□□□□□ -1.65
CNOT1-218ENST00000569732 ELOBQ15370 118 aa4.77□□□□□ -1.65
CNOT1-218ENST00000569732 KCNIP4Q6PIL6 250 aa4.77□□□□□ -1.65
CNOT1-218ENST00000569732 NTM-AS1Q6ZSK4 140 aa4.77□□□□□ -1.65
CNOT1-218ENST00000569732 CBLN2Q8IUK8 224 aa4.77□□□□□ -1.65
CNOT1-218ENST00000569732 NIT2Q9NQR4 276 aa4.77□□□□□ -1.65
CNOT1-218ENST00000569732 TRBV24-1A0A075B6N3 115 aa4.76□□□□□ -1.65
CNOT1-218ENST00000569732 A0A087WTM6 91 aa4.76□□□□□ -1.65
CNOT1-218ENST00000569732 IGHV3-38A0A0C4DH36 116 aa4.76□□□□□ -1.65
CNOT1-218ENST00000569732 D6R8Y8 96 aa4.76□□□□□ -1.65
CNOT1-218ENST00000569732 K7EP13 123 aa4.76□□□□□ -1.65
CNOT1-218ENST00000569732 S100PP25815 95 aa4.76□□□□□ -1.65
CNOT1-218ENST00000569732 FUSP35637 526 aaKnown RBP eCLIP4.76□□□□□ -1.65
CNOT1-218ENST00000569732 POLR2KP53803 58 aaKnown RBP4.76□□□□□ -1.65
CNOT1-218ENST00000569732 LELP1Q5T871 98 aa4.76□□□□□ -1.65
CNOT1-218ENST00000569732 DAZ4Q86SG3 579 aaKnown RBP4.76□□□□□ -1.65
CNOT1-218ENST00000569732 WFDC10BQ8IUB3 73 aa4.76□□□□□ -1.65
CNOT1-218ENST00000569732 TMEM70Q9BUB7 260 aa4.76□□□□□ -1.65
CNOT1-218ENST00000569732 DAZ3Q9NR90 486 aaKnown RBP4.76□□□□□ -1.65
CNOT1-218ENST00000569732 IGKV2-30P06310 120 aa4.75□□□□□ -1.65
CNOT1-218ENST00000569732 OR10J3Q5JRS4 329 aa4.75□□□□□ -1.65
CNOT1-218ENST00000569732 GNB1LQ9BYB4 327 aa4.75□□□□□ -1.65
CNOT1-218ENST00000569732 TNFRSF18Q9Y5U5 241 aa4.75□□□□□ -1.65
CNOT1-218ENST00000569732 DNAH8Q96JB1 4490 aa4.75□□□□□ -1.65
CNOT1-218ENST00000569732 TRAV9-2A0A087WT02 112 aa4.74□□□□□ -1.65
CNOT1-218ENST00000569732 TRBV6-8A0A0A6YYG3 113 aa4.74□□□□□ -1.65
CNOT1-218ENST00000569732 TRBV27A0A0K0K1C4 114 aa4.74□□□□□ -1.65
CNOT1-218ENST00000569732 SDHAF1A6NFY7 115 aa4.74□□□□□ -1.65
CNOT1-218ENST00000569732 TSHBP01222 138 aa4.74□□□□□ -1.65
CNOT1-218ENST00000569732 NPYP01303 97 aa4.74□□□□□ -1.65
CNOT1-218ENST00000569732 DNAH10OSP0CZ25 163 aa4.74□□□□□ -1.65
CNOT1-218ENST00000569732 RPL32P62910 135 aaKnown RBP4.74□□□□□ -1.65
CNOT1-218ENST00000569732 IQCJQ1A5X6 159 aa4.74□□□□□ -1.65
CNOT1-218ENST00000569732 ST20Q9HBF5 79 aa4.74□□□□□ -1.65
CNOT1-218ENST00000569732 PHOX2AO14813 284 aa4.73□□□□□ -1.65
CNOT1-218ENST00000569732 SCO1O75880 301 aa4.73□□□□□ -1.65
CNOT1-218ENST00000569732 PPP1R17O96001 155 aa4.73□□□□□ -1.65
CNOT1-218ENST00000569732 HLA-DQA1P01909 254 aa4.73□□□□□ -1.65
CNOT1-218ENST00000569732 PPBPP02775 128 aa4.73□□□□□ -1.65
CNOT1-218ENST00000569732 CKS2P33552 79 aa4.73□□□□□ -1.65
CNOT1-218ENST00000569732 COX19Q49B96 90 aa4.73□□□□□ -1.65
CNOT1-218ENST00000569732 LINC01556Q5JQF7 62 aa4.73□□□□□ -1.65
CNOT1-218ENST00000569732 NIT1Q86X76 327 aa4.73□□□□□ -1.65
CNOT1-218ENST00000569732 ORMDL3Q8N138 153 aa4.73□□□□□ -1.65
CNOT1-218ENST00000569732 DEFB104AQ8WTQ1 72 aa4.73□□□□□ -1.65
CNOT1-218ENST00000569732 PRELID3AQ96N28 172 aa4.73□□□□□ -1.65
CNOT1-218ENST00000569732 C20orf78Q9BR46 151 aa4.73□□□□□ -1.65
CNOT1-218ENST00000569732 CHCHD7Q9BUK0 85 aa4.73□□□□□ -1.65
CNOT1-218ENST00000569732 SMCO4Q9NRQ5 59 aa4.73□□□□□ -1.65
CNOT1-218ENST00000569732 TRAV8-6A0A0B4J262 113 aa4.72□□□□□ -1.65
CNOT1-218ENST00000569732 COLCA2A8K830 154 aa4.72□□□□□ -1.65
CNOT1-218ENST00000569732 I3L3M4 83 aa4.72□□□□□ -1.65
CNOT1-218ENST00000569732 ATP6V1G1O75348 118 aa4.72□□□□□ -1.65
CNOT1-218ENST00000569732 APCSP02743 223 aa4.72□□□□□ -1.65
CNOT1-218ENST00000569732 MT-ND6P03923 174 aa4.72□□□□□ -1.65
CNOT1-218ENST00000569732 ESDP10768 282 aa4.72□□□□□ -1.65
CNOT1-218ENST00000569732 KIAA1644Q3SXP7 199 aa4.72□□□□□ -1.65
CNOT1-218ENST00000569732 TMEM97Q5BJF2 176 aa4.72□□□□□ -1.65
CNOT1-218ENST00000569732 ALKBH7Q9BT30 221 aaPredicted RBP4.72□□□□□ -1.65
CNOT1-218ENST00000569732 SMIM2Q9BVW6 85 aa4.72□□□□□ -1.65
CNOT1-218ENST00000569732 LAMTOR2Q9Y2Q5 125 aa4.72□□□□□ -1.65
CNOT1-218ENST00000569732 IGHV1-24A0A0C4DH33 117 aa4.71□□□□□ -1.66
CNOT1-218ENST00000569732 HAMPP81172 84 aa4.71□□□□□ -1.66
CNOT1-218ENST00000569732 COTL1Q14019 142 aa4.71□□□□□ -1.66
CNOT1-218ENST00000569732 MPV17L2Q567V2 206 aa4.71□□□□□ -1.66
CNOT1-218ENST00000569732 FAT3Q8TDW7 4589 aa4.71□□□□□ -1.66
CNOT1-218ENST00000569732 TRBV25-1A0A075B6N4 114 aa4.7□□□□□ -1.66
CNOT1-218ENST00000569732 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.7□□□□□ -1.66
CNOT1-218ENST00000569732 IGKV2-29A2NJV5 120 aaPredicted RBP4.7□□□□□ -1.66
CNOT1-218ENST00000569732 IGHV3-30P01768 117 aa4.7□□□□□ -1.66
CNOT1-218ENST00000569732 IGHV3-33P01772 117 aa4.7□□□□□ -1.66
CNOT1-218ENST00000569732 IGHV3-30-3P0DP02 117 aa4.7□□□□□ -1.66
CNOT1-218ENST00000569732 IGHV3-30-5P0DP03 117 aa4.7□□□□□ -1.66
CNOT1-218ENST00000569732 PMCHP20382 165 aa4.7□□□□□ -1.66
CNOT1-218ENST00000569732 RBX1P62877 108 aa4.7□□□□□ -1.66
CNOT1-218ENST00000569732 RPL24P83731 157 aaKnown RBP4.7□□□□□ -1.66
CNOT1-218ENST00000569732 GAGE6Q13070 117 aa4.7□□□□□ -1.66
CNOT1-218ENST00000569732 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.7□□□□□ -1.66
CNOT1-218ENST00000569732 FAM104AQ969W3 186 aa4.7□□□□□ -1.66
CNOT1-218ENST00000569732 CHCHD5Q9BSY4 110 aa4.7□□□□□ -1.66
CNOT1-218ENST00000569732 TMEM243Q9BU79 118 aa4.7□□□□□ -1.66
CNOT1-218ENST00000569732 TRAPPC1Q9Y5R8 145 aa4.7□□□□□ -1.66
CNOT1-218ENST00000569732 LRP1Q07954 4544 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms