RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 TWIST1Q15672 202 aa7.7□□□□□ -1.18
SNX29-207ENST00000568949 PGLYRP4Q96LB8 373 aa7.7□□□□□ -1.18
SNX29-207ENST00000568949 TSKUQ8WUA8 353 aa7.69□□□□□ -1.18
SNX29-207ENST00000568949 UBE2L6O14933 153 aa7.68□□□□□ -1.18
SNX29-207ENST00000568949 SSTP61278 116 aa7.68□□□□□ -1.18
SNX29-207ENST00000568949 CLLU1Q5K131 121 aa7.68□□□□□ -1.18
SNX29-207ENST00000568949 A0A0U1RQV1 116 aa7.67□□□□□ -1.18
SNX29-207ENST00000568949 MGPP08493 103 aa7.67□□□□□ -1.18
SNX29-207ENST00000568949 PNRC1Q12796 327 aaPredicted RBP7.67□□□□□ -1.18
SNX29-207ENST00000568949 ADIRFQ15847 76 aa7.67□□□□□ -1.18
SNX29-207ENST00000568949 SUMO4Q6EEV6 95 aa7.67□□□□□ -1.18
SNX29-207ENST00000568949 ZNF664Q8N3J9 261 aa7.67□□□□□ -1.18
SNX29-207ENST00000568949 ISOC2Q96AB3 205 aa7.67□□□□□ -1.18
SNX29-207ENST00000568949 A0A1B0GUT8 65 aa7.66□□□□□ -1.18
SNX29-207ENST00000568949 A0A1B0GW15 77 aa7.66□□□□□ -1.18
SNX29-207ENST00000568949 PPP1R2P9O14990 202 aa7.66□□□□□ -1.18
SNX29-207ENST00000568949 RPL23P62829 140 aaKnown RBP7.66□□□□□ -1.18
SNX29-207ENST00000568949 RASL11AQ6T310 242 aa7.66□□□□□ -1.18
SNX29-207ENST00000568949 UQCC3Q6UW78 93 aa7.66□□□□□ -1.18
SNX29-207ENST00000568949 CHCHD10Q8WYQ3 142 aaPredicted RBP7.66□□□□□ -1.18
SNX29-207ENST00000568949 NAT8BQ9UHF3 227 aa7.66□□□□□ -1.18
SNX29-207ENST00000568949 PSORS1C2Q9UIG4 136 aa7.66□□□□□ -1.18
SNX29-207ENST00000568949 HIGD1CA8MV81 97 aa7.65□□□□□ -1.18
SNX29-207ENST00000568949 S100A8P05109 93 aa7.65□□□□□ -1.18
SNX29-207ENST00000568949 AMTP48728 403 aa7.65□□□□□ -1.18
SNX29-207ENST00000568949 RIGQ13278 110 aa7.65□□□□□ -1.18
SNX29-207ENST00000568949 COTL1Q14019 142 aa7.65□□□□□ -1.18
SNX29-207ENST00000568949 NIT2Q9NQR4 276 aa7.65□□□□□ -1.18
SNX29-207ENST00000568949 IGKV3OR2-268A0A0C4DH90 116 aa7.64□□□□□ -1.19
SNX29-207ENST00000568949 PPP1R17O96001 155 aa7.64□□□□□ -1.19
SNX29-207ENST00000568949 MUC2Q02817 5179 aa7.63□□□□□ -1.19
SNX29-207ENST00000568949 KRTAP9-6A0A140TA67 174 aa7.63□□□□□ -1.19
SNX29-207ENST00000568949 FOXI1Q12951 378 aa7.63□□□□□ -1.19
SNX29-207ENST00000568949 CARD19Q96LW7 228 aa7.63□□□□□ -1.19
SNX29-207ENST00000568949 TMEM191AQ9H0A3 160 aa7.63□□□□□ -1.19
SNX29-207ENST00000568949 V9GYV3 84 aa7.63□□□□□ -1.19
SNX29-207ENST00000568949 TRAV26-2A0A0B4J265 109 aa7.62□□□□□ -1.19
SNX29-207ENST00000568949 IGHV1-58A0A0C4DH39 117 aa7.62□□□□□ -1.19
SNX29-207ENST00000568949 C9JQL5 133 aa7.62□□□□□ -1.19
SNX29-207ENST00000568949 MT-ND4LP03901 98 aa7.62□□□□□ -1.19
SNX29-207ENST00000568949 SRSF3P84103 164 aaKnown RBP7.62□□□□□ -1.19
SNX29-207ENST00000568949 FAT4Q6V0I7 4981 aa7.61□□□□□ -1.19
SNX29-207ENST00000568949 SMIM27A0A1W2PRY6 76 aa7.61□□□□□ -1.19
SNX29-207ENST00000568949 F8W036 122 aa7.61□□□□□ -1.19
SNX29-207ENST00000568949 H7C423 109 aa7.61□□□□□ -1.19
SNX29-207ENST00000568949 PTTG1IPP53801 180 aa7.61□□□□□ -1.19
SNX29-207ENST00000568949 AMMECR1LQ6DCA0 310 aa7.61□□□□□ -1.19
SNX29-207ENST00000568949 MRAP2Q96G30 205 aa7.61□□□□□ -1.19
SNX29-207ENST00000568949 NCR2O95944 276 aa7.6□□□□□ -1.19
SNX29-207ENST00000568949 SYCNQ0VAF6 134 aa7.6□□□□□ -1.19
SNX29-207ENST00000568949 NUP35Q8NFH5 326 aa7.6□□□□□ -1.19
SNX29-207ENST00000568949 MT-ND6P03923 174 aa7.59□□□□□ -1.19
SNX29-207ENST00000568949 RNASEKQ6P5S7 137 aaKnown RBP7.59□□□□□ -1.19
SNX29-207ENST00000568949 ATP5L2Q7Z4Y8 100 aa7.59□□□□□ -1.19
SNX29-207ENST00000568949 PRR26Q8N8Z3 221 aa7.59□□□□□ -1.19
SNX29-207ENST00000568949 LINC00526Q96FQ7 95 aa7.59□□□□□ -1.19
SNX29-207ENST00000568949 LOC107984640A0A0U1RRK4 108 aa7.58□□□□□ -1.2
SNX29-207ENST00000568949 A0A1W2PNN7 141 aa7.58□□□□□ -1.2
SNX29-207ENST00000568949 LINC00862A6NCI5 91 aa7.58□□□□□ -1.2
SNX29-207ENST00000568949 GATD1Q8NB37 220 aa7.58□□□□□ -1.2
SNX29-207ENST00000568949 OR5A1Q8NGJ0 315 aa7.58□□□□□ -1.2
SNX29-207ENST00000568949 DIRC1Q969H9 104 aa7.58□□□□□ -1.2
SNX29-207ENST00000568949 TRBV6-5A0A0K0K1A5 114 aa7.57□□□□□ -1.2
SNX29-207ENST00000568949 ZNF561-AS1K7EIQ3 104 aa7.57□□□□□ -1.2
SNX29-207ENST00000568949 TCAPO15273 167 aa7.57□□□□□ -1.2
SNX29-207ENST00000568949 FGF6P10767 208 aa7.57□□□□□ -1.2
SNX29-207ENST00000568949 ZNF25P17030 456 aaPredicted RBP7.57□□□□□ -1.2
SNX29-207ENST00000568949 XCL1P47992 114 aa7.57□□□□□ -1.2
SNX29-207ENST00000568949 HBBP68871 147 aa7.57□□□□□ -1.2
SNX29-207ENST00000568949 IFITM2Q01629 132 aa7.57□□□□□ -1.2
SNX29-207ENST00000568949 SMAGPQ0VAQ4 97 aa7.57□□□□□ -1.2
SNX29-207ENST00000568949 GAGE2BQ13066 116 aa7.57□□□□□ -1.2
SNX29-207ENST00000568949 C1orf137Q5JT78 98 aa7.57□□□□□ -1.2
SNX29-207ENST00000568949 LCE2AQ5TA79 106 aaPredicted RBP7.57□□□□□ -1.2
SNX29-207ENST00000568949 ST20Q9HBF5 79 aa7.57□□□□□ -1.2
SNX29-207ENST00000568949 IGLV1-50A0A075B6I6 118 aa7.56□□□□□ -1.2
SNX29-207ENST00000568949 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.56□□□□□ -1.2
SNX29-207ENST00000568949 LINC00959A0A1B0GUT2 108 aa7.56□□□□□ -1.2
SNX29-207ENST00000568949 IGKV2-29A2NJV5 120 aaPredicted RBP7.56□□□□□ -1.2
SNX29-207ENST00000568949 TMEM218A2RU14 115 aa7.56□□□□□ -1.2
SNX29-207ENST00000568949 I3L3M4 83 aa7.56□□□□□ -1.2
SNX29-207ENST00000568949 CCL25O15444 150 aa7.56□□□□□ -1.2
SNX29-207ENST00000568949 PPBPP02775 128 aa7.56□□□□□ -1.2
SNX29-207ENST00000568949 PRR4Q16378 134 aa7.56□□□□□ -1.2
SNX29-207ENST00000568949 IMMP2LQ96T52 175 aa7.56□□□□□ -1.2
SNX29-207ENST00000568949 SEC11CQ9BY50 192 aa7.56□□□□□ -1.2
SNX29-207ENST00000568949 CTDSP1Q9GZU7 261 aa7.56□□□□□ -1.2
SNX29-207ENST00000568949 SDHAF1A6NFY7 115 aa7.55□□□□□ -1.2
SNX29-207ENST00000568949 APCSP02743 223 aa7.55□□□□□ -1.2
SNX29-207ENST00000568949 RAB4AP20338 218 aa7.55□□□□□ -1.2
SNX29-207ENST00000568949 PMCHP20382 165 aa7.55□□□□□ -1.2
SNX29-207ENST00000568949 CAMPP49913 170 aa7.55□□□□□ -1.2
SNX29-207ENST00000568949 C9orf116Q5BN46 136 aaPredicted RBP7.55□□□□□ -1.2
SNX29-207ENST00000568949 BTF3L4Q96K17 158 aa7.55□□□□□ -1.2
SNX29-207ENST00000568949 VCYO14598 125 aa7.54□□□□□ -1.2
SNX29-207ENST00000568949 IGLV7-43P04211 117 aa7.54□□□□□ -1.2
SNX29-207ENST00000568949 CKS2P33552 79 aa7.54□□□□□ -1.2
SNX29-207ENST00000568949 FAM104BQ5XKR9 115 aa7.54□□□□□ -1.2
SNX29-207ENST00000568949 CD164L2Q6UWJ8 174 aa7.54□□□□□ -1.2
SNX29-207ENST00000568949 KIR2DL4Q99706 377 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms